scaffold32776 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold32776 |
3 |
1011 |
- |
Gypsy-7_CP-I |
LTR/Gypsy |
| scaffold32776 |
131 |
155 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
214 |
255 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
1172 |
1223 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
2016 |
2197 |
- |
RS663 |
Unspecified |
| scaffold32776 |
2261 |
2283 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold32776 |
2633 |
2865 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold32776 |
3153 |
3200 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
3340 |
3371 |
+ |
(AAGGGA)n |
Simple_repeat |
| scaffold32776 |
3372 |
3392 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
4546 |
4718 |
+ |
RS295 |
Unspecified |
| scaffold32776 |
4719 |
4935 |
+ |
RS16888 |
Unspecified |
| scaffold32776 |
6716 |
6790 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold32776 |
7319 |
7340 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold32776 |
7338 |
7455 |
+ |
RS1625 |
Unspecified |
| scaffold32776 |
7340 |
7412 |
+ |
RS3769 |
Unspecified |
| scaffold32776 |
7526 |
7681 |
+ |
(TACAT)n |
Simple_repeat |
| scaffold32776 |
7701 |
7785 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
8178 |
8239 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold32776 |
8305 |
8364 |
+ |
(AATAATC)n |
Simple_repeat |
| scaffold32776 |
8422 |
8469 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold32776 |
8869 |
8995 |
+ |
RS13315 |
Unspecified |
| scaffold32776 |
10811 |
10839 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
10934 |
11492 |
+ |
HELMET3 |
RC/Helitron |
| scaffold32776 |
11574 |
11741 |
+ |
Helitron3 |
RC/Helitron |
| scaffold32776 |
11826 |
12491 |
+ |
Helitron1 |
RC/Helitron |
| scaffold32776 |
12513 |
12564 |
+ |
(TT)n |
Simple_repeat |
| scaffold32776 |
13432 |
13462 |
+ |
(ATG)n |
Simple_repeat |
| scaffold32776 |
13537 |
13558 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
15718 |
15839 |
+ |
RS15758 |
Unspecified |
| scaffold32776 |
15889 |
16093 |
+ |
RS18073 |
Unspecified |
| scaffold32776 |
16140 |
16312 |
+ |
RS18070 |
Unspecified |
| scaffold32776 |
16314 |
16470 |
+ |
RS16115 |
Unspecified |
| scaffold32776 |
16527 |
16663 |
+ |
RS18387 |
Unspecified |
| scaffold32776 |
16801 |
16893 |
- |
PL1 |
Unspecified |
| scaffold32776 |
16932 |
16978 |
+ |
(CAA)n |
Simple_repeat |
| scaffold32776 |
17993 |
18094 |
+ |
RS17546 |
Unspecified |
| scaffold32776 |
18335 |
18389 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
20181 |
20202 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
20596 |
20664 |
+ |
RS16831 |
Unspecified |
| scaffold32776 |
21006 |
21047 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
21817 |
21845 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
21921 |
22348 |
+ |
PL580 |
Unspecified |
| scaffold32776 |
22365 |
22405 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
22694 |
22752 |
+ |
PL601 |
Unspecified |
| scaffold32776 |
22759 |
22852 |
- |
RS745 |
Unspecified |
| scaffold32776 |
23274 |
24383 |
+ |
RS306 |
Unspecified |
| scaffold32776 |
24376 |
24567 |
+ |
RS172 |
Unspecified |
| scaffold32776 |
24692 |
24757 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
25430 |
25472 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
27200 |
27216 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
27892 |
27996 |
+ |
(TCT)n |
Simple_repeat |
| scaffold32776 |
28500 |
28516 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
28640 |
28702 |
+ |
(CGGCA)n |
Simple_repeat |
| scaffold32776 |
28740 |
28779 |
+ |
(AGGCACG)n |
Simple_repeat |
| scaffold32776 |
28851 |
28873 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
28893 |
28937 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold32776 |
29188 |
29279 |
+ |
(TTTGTAA)n |
Simple_repeat |
| scaffold32776 |
29399 |
29499 |
- |
RS4351 |
Unspecified |
| scaffold32776 |
29678 |
30049 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold32776 |
30358 |
32031 |
- |
Copia-31_GM-I |
LTR/Copia |
| scaffold32776 |
32206 |
32993 |
- |
Copia-31_GM-I |
LTR/Copia |
| scaffold32776 |
33387 |
33412 |
+ |
(TAC)n |
Simple_repeat |
| scaffold32776 |
34149 |
34547 |
+ |
PL576 |
Unspecified |
| scaffold32776 |
34693 |
34746 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
35127 |
35256 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold32776 |
35698 |
35723 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
36283 |
36313 |
+ |
(ATACGG)n |
Simple_repeat |
| scaffold32776 |
36315 |
36345 |
+ |
(TAGTAGA)n |
Simple_repeat |
| scaffold32776 |
37327 |
37995 |
+ |
RS1592 |
Unspecified |
| scaffold32776 |
38141 |
38196 |
- |
RS10158 |
Unspecified |
| scaffold32776 |
38149 |
38185 |
+ |
RS15179 |
Unspecified |
| scaffold32776 |
38575 |
38657 |
+ |
(ATT)n |
Simple_repeat |
| scaffold32776 |
39410 |
39478 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold32776 |
45029 |
45271 |
+ |
RS4 |
Unspecified |
| scaffold32776 |
47129 |
47183 |
+ |
(GTGTCTC)n |
Simple_repeat |
| scaffold32776 |
47201 |
47350 |
- |
RS663 |
Unspecified |
| scaffold32776 |
48138 |
48200 |
+ |
GA-rich |
Low_complexity |
| scaffold32776 |
48519 |
48552 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
49089 |
49349 |
- |
RS26 |
Unspecified |
| scaffold32776 |
50048 |
50089 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold32776 |
50335 |
50441 |
- |
RS4 |
Unspecified |
| scaffold32776 |
51029 |
51053 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
51147 |
51275 |
- |
RS4 |
Unspecified |
| scaffold32776 |
51754 |
51985 |
+ |
PL232 |
Unspecified |
| scaffold32776 |
52079 |
52114 |
+ |
(TTC)n |
Simple_repeat |
| scaffold32776 |
52891 |
53005 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
53331 |
53417 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
54009 |
54130 |
+ |
RS15758 |
Unspecified |
| scaffold32776 |
54180 |
54384 |
+ |
RS18073 |
Unspecified |
| scaffold32776 |
54431 |
54603 |
+ |
RS18070 |
Unspecified |
| scaffold32776 |
54605 |
54761 |
+ |
RS16115 |
Unspecified |
| scaffold32776 |
54818 |
54954 |
+ |
RS18387 |
Unspecified |
| scaffold32776 |
55327 |
55428 |
+ |
RS17546 |
Unspecified |
| scaffold32776 |
55663 |
55689 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
55907 |
56146 |
- |
RS1663 |
Unspecified |
| scaffold32776 |
56176 |
56213 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
56489 |
56513 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
56763 |
57313 |
- |
PL444 |
Unspecified |
| scaffold32776 |
58704 |
58729 |
+ |
(T)n |
Simple_repeat |
| scaffold32776 |
61965 |
62090 |
+ |
RS10894 |
Unspecified |
| scaffold32776 |
63635 |
63654 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
64120 |
64147 |
+ |
(A)n |
Simple_repeat |
| scaffold32776 |
64302 |
64349 |
+ |
GA-rich |
Low_complexity |
| scaffold32776 |
65531 |
65609 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold32776 |
66236 |
68652 |
+ |
RS254 |
Unspecified |
| scaffold32776 |
69517 |
69571 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
69832 |
70022 |
- |
RS9540 |
Unspecified |
| scaffold32776 |
70293 |
70644 |
+ |
RS11196 |
Unspecified |
| scaffold32776 |
71401 |
71838 |
- |
RS234 |
Unspecified |
| scaffold32776 |
72267 |
72525 |
+ |
RS736 |
Unspecified |
| scaffold32776 |
72720 |
72824 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold32776 |
73180 |
73213 |
+ |
A-rich |
Low_complexity |
| scaffold32776 |
74194 |
74950 |
- |
PL21 |
Unspecified |
| scaffold32776 |
76180 |
76270 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold32776 |
76465 |
77427 |
+ |
ATLINE1_11 |
LINE/L1 |
| scaffold32776 |
77506 |
77730 |
+ |
L1-12_GM |
LINE/L1 |
| scaffold32776 |
79363 |
79935 |
- |
PL268 |
Unspecified |
| scaffold32776 |
80134 |
81075 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold32776 |
81040 |
81075 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold32776 |
81461 |
82065 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold32776 |
82918 |
84130 |
- |
RS934 |
Unspecified |
| scaffold32776 |
87873 |
87928 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold32776 |
87970 |
88176 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold32776 |
88239 |
88860 |
- |
PL909 |
Unspecified |
| scaffold32776 |
89018 |
89086 |
+ |
A-rich |
Low_complexity |