scaffold336 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold336 |
1 |
194 |
- |
RS1539 |
Unspecified |
| scaffold336 |
196 |
492 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold336 |
196 |
275 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold336 |
197 |
492 |
+ |
Copia-7_BRa-I |
LTR/Copia |
| scaffold336 |
197 |
295 |
+ |
Copia-7_BRa-I |
LTR/Copia |
| scaffold336 |
252 |
492 |
+ |
RS2055 |
Unspecified |
| scaffold336 |
565 |
845 |
+ |
PL827 |
Unspecified |
| scaffold336 |
770 |
942 |
+ |
PL827 |
Unspecified |
| scaffold336 |
850 |
1153 |
+ |
RS1094 |
Unspecified |
| scaffold336 |
1061 |
1250 |
+ |
PL827 |
Unspecified |
| scaffold336 |
1158 |
1533 |
+ |
RS1094 |
Unspecified |
| scaffold336 |
1408 |
1761 |
+ |
RS1094 |
Unspecified |
| scaffold336 |
1651 |
1800 |
+ |
RS11826 |
Unspecified |
| scaffold336 |
5165 |
5209 |
+ |
(AGGAAGC)n |
Simple_repeat |
| scaffold336 |
6466 |
6620 |
- |
RS983 |
Unspecified |
| scaffold336 |
7215 |
7262 |
+ |
(CACAAGA)n |
Simple_repeat |
| scaffold336 |
8043 |
8147 |
+ |
RS645 |
Unspecified |
| scaffold336 |
8463 |
8532 |
+ |
RS508 |
Unspecified |
| scaffold336 |
9589 |
9623 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold336 |
10469 |
10513 |
+ |
(ACGAGC)n |
Simple_repeat |
| scaffold336 |
10562 |
10599 |
+ |
(AGCAAC)n |
Simple_repeat |
| scaffold336 |
11554 |
11621 |
+ |
(CAACACA)n |
Simple_repeat |
| scaffold336 |
11590 |
11633 |
+ |
A-rich |
Low_complexity |
| scaffold336 |
16434 |
16781 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold336 |
16852 |
17022 |
+ |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold336 |
17690 |
17834 |
+ |
RS5929 |
Unspecified |
| scaffold336 |
17759 |
17905 |
+ |
RS5929 |
Unspecified |
| scaffold336 |
17805 |
17951 |
+ |
RS5929 |
Unspecified |
| scaffold336 |
17851 |
17997 |
+ |
RS5929 |
Unspecified |
| scaffold336 |
19066 |
19144 |
+ |
(CA)n |
Simple_repeat |
| scaffold336 |
19603 |
19650 |
+ |
(GAT)n |
Simple_repeat |
| scaffold336 |
19750 |
19792 |
+ |
(TAC)n |
Simple_repeat |
| scaffold336 |
19793 |
19821 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold336 |
20112 |
20384 |
+ |
Gypsy13-PTR_I-int |
LTR/Gypsy |
| scaffold336 |
20344 |
20367 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold336 |
20368 |
20434 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold336 |
20435 |
20462 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold336 |
20712 |
20817 |
+ |
PL827 |
Unspecified |
| scaffold336 |
20761 |
20962 |
+ |
RS1717 |
Unspecified |
| scaffold336 |
20914 |
21113 |
+ |
RS1717 |
Unspecified |
| scaffold336 |
21114 |
21730 |
- |
PL522 |
Unspecified |
| scaffold336 |
21726 |
21797 |
- |
RS1563 |
Unspecified |
| scaffold336 |
21798 |
21912 |
+ |
RS12504 |
Unspecified |
| scaffold336 |
23949 |
24164 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold336 |
29445 |
29723 |
- |
EnSpm-3_GM |
DNA/CMC-EnSpm |
| scaffold336 |
29778 |
29822 |
- |
EnSpm-5_STu |
DNA/CMC-EnSpm |
| scaffold336 |
30298 |
30989 |
- |
EnSpm-4_GM |
DNA/CMC-EnSpm |
| scaffold336 |
31168 |
31385 |
- |
EnSpm-28_SBi |
DNA/CMC-EnSpm |
| scaffold336 |
170099 |
170195 |
+ |
(TT)n |
Simple_repeat |