scaffold34335 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold34335 |
209 |
488 |
+ |
RS1598 |
Unspecified |
| scaffold34335 |
485 |
541 |
+ |
RS5390 |
Unspecified |
| scaffold34335 |
510 |
911 |
+ |
RS2830 |
Unspecified |
| scaffold34335 |
1525 |
1671 |
- |
RS2426 |
Unspecified |
| scaffold34335 |
5658 |
5693 |
+ |
(TCTCCT)n |
Simple_repeat |
| scaffold34335 |
7447 |
7506 |
+ |
(ATT)n |
Simple_repeat |
| scaffold34335 |
8658 |
8677 |
+ |
(GTT)n |
Simple_repeat |
| scaffold34335 |
8959 |
8980 |
+ |
(TTG)n |
Simple_repeat |
| scaffold34335 |
9621 |
10010 |
- |
RS29 |
Unspecified |
| scaffold34335 |
10428 |
10485 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold34335 |
10527 |
10566 |
+ |
(AATT)n |
Simple_repeat |
| scaffold34335 |
10656 |
10834 |
+ |
RS7255 |
Unspecified |
| scaffold34335 |
10901 |
10925 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
11542 |
11605 |
+ |
(ATT)n |
Simple_repeat |
| scaffold34335 |
11908 |
11948 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
13560 |
13605 |
+ |
(AATT)n |
Simple_repeat |
| scaffold34335 |
14015 |
14257 |
- |
RS4 |
Unspecified |
| scaffold34335 |
14321 |
14392 |
- |
RS1450 |
Unspecified |
| scaffold34335 |
14423 |
14473 |
+ |
(TATTAAT)n |
Simple_repeat |
| scaffold34335 |
14562 |
14625 |
+ |
(AT)n |
Simple_repeat |
| scaffold34335 |
15906 |
16047 |
+ |
PL469 |
Unspecified |
| scaffold34335 |
16426 |
16517 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold34335 |
16630 |
16691 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold34335 |
18334 |
18388 |
+ |
RS18371 |
Unspecified |
| scaffold34335 |
18344 |
18403 |
- |
RS1854 |
Unspecified |
| scaffold34335 |
18523 |
18546 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
18842 |
18937 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
18969 |
19062 |
+ |
RS79 |
Unspecified |
| scaffold34335 |
19453 |
19473 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
19503 |
19531 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
19503 |
19629 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
19523 |
19629 |
+ |
RS79 |
Unspecified |
| scaffold34335 |
19933 |
19970 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
24040 |
24060 |
+ |
(AAT)n |
Simple_repeat |
| scaffold34335 |
24671 |
24714 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
24856 |
24921 |
- |
PL567 |
Unspecified |
| scaffold34335 |
24865 |
25331 |
- |
PL582 |
Unspecified |
| scaffold34335 |
25808 |
26000 |
- |
RS163 |
Unspecified |
| scaffold34335 |
26286 |
26558 |
+ |
RS106 |
Unspecified |
| scaffold34335 |
27364 |
27427 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
27629 |
27763 |
- |
RS1812 |
Unspecified |
| scaffold34335 |
27949 |
28007 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
28415 |
28434 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
28557 |
28724 |
- |
RS1029 |
Unspecified |
| scaffold34335 |
29035 |
29091 |
+ |
Helitron-N4_ZM |
RC/Helitron |
| scaffold34335 |
29713 |
29740 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
31901 |
31956 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold34335 |
32914 |
33189 |
+ |
RS2785 |
Unspecified |
| scaffold34335 |
33206 |
33470 |
+ |
RS248 |
Unspecified |
| scaffold34335 |
33598 |
33621 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
36018 |
36048 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
36479 |
36500 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
37557 |
37587 |
+ |
(ATG)n |
Simple_repeat |
| scaffold34335 |
42473 |
42538 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
42954 |
43007 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold34335 |
43072 |
43184 |
+ |
ATLINE1_9 |
LINE/L1 |
| scaffold34335 |
44116 |
44417 |
+ |
RS14565 |
Unspecified |
| scaffold34335 |
44656 |
44680 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
45371 |
45443 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold34335 |
45914 |
45932 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
46385 |
46733 |
+ |
RS42 |
Unspecified |
| scaffold34335 |
46823 |
46915 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold34335 |
47097 |
47121 |
+ |
(GATGA)n |
Simple_repeat |
| scaffold34335 |
47338 |
47431 |
+ |
RS16382 |
Unspecified |
| scaffold34335 |
47565 |
47654 |
- |
RS12449 |
Unspecified |
| scaffold34335 |
47568 |
47645 |
+ |
RS13929 |
Unspecified |
| scaffold34335 |
48093 |
48184 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold34335 |
48381 |
48422 |
+ |
(AACCG)n |
Simple_repeat |
| scaffold34335 |
48717 |
48751 |
+ |
A-rich |
Low_complexity |
| scaffold34335 |
48888 |
49149 |
- |
RS1 |
Unspecified |
| scaffold34335 |
49052 |
49163 |
+ |
RS15138 |
Unspecified |
| scaffold34335 |
49060 |
49183 |
+ |
RS17699 |
Unspecified |
| scaffold34335 |
49204 |
49236 |
+ |
(TCTAC)n |
Simple_repeat |
| scaffold34335 |
49236 |
49293 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
49414 |
49462 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold34335 |
49834 |
49863 |
+ |
(TGAAT)n |
Simple_repeat |
| scaffold34335 |
51578 |
51598 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
52894 |
52914 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
60736 |
60759 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
60761 |
60788 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
61575 |
61596 |
+ |
(T)n |
Simple_repeat |
| scaffold34335 |
61721 |
61868 |
+ |
RS38 |
Unspecified |
| scaffold34335 |
63179 |
63209 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold34335 |
63489 |
63525 |
+ |
(AT)n |
Simple_repeat |
| scaffold34335 |
63717 |
63742 |
+ |
(TA)n |
Simple_repeat |
| scaffold34335 |
64175 |
64269 |
+ |
RS18358 |
Unspecified |
| scaffold34335 |
64785 |
64883 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold34335 |
65135 |
65237 |
+ |
RS16358 |
Unspecified |
| scaffold34335 |
67007 |
67190 |
- |
RS3756 |
Unspecified |
| scaffold34335 |
67788 |
67815 |
+ |
(ACCAT)n |
Simple_repeat |
| scaffold34335 |
67990 |
68050 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold34335 |
68491 |
68526 |
+ |
(AATA)n |
Simple_repeat |
| scaffold34335 |
69106 |
69217 |
- |
RS622 |
Unspecified |
| scaffold34335 |
69199 |
69297 |
- |
RS622 |
Unspecified |
| scaffold34335 |
69494 |
69598 |
- |
PL754 |
Unspecified |
| scaffold34335 |
70229 |
70283 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
70299 |
70366 |
+ |
(CAC)n |
Simple_repeat |
| scaffold34335 |
72419 |
72594 |
- |
PL699 |
Unspecified |
| scaffold34335 |
73063 |
73106 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold34335 |
73722 |
73752 |
+ |
(A)n |
Simple_repeat |
| scaffold34335 |
74838 |
74901 |
+ |
(TC)n |
Simple_repeat |
| scaffold34335 |
74902 |
74937 |
+ |
(CTTCT)n |
Simple_repeat |
| scaffold34335 |
75024 |
75071 |
+ |
(TTTACA)n |
Simple_repeat |
| scaffold34335 |
75163 |
75262 |
+ |
(ACC)n |
Simple_repeat |
| scaffold34335 |
76008 |
76111 |
+ |
(CAT)n |
Simple_repeat |
| scaffold34335 |
76292 |
76336 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold34335 |
76760 |
76786 |
+ |
(TAG)n |
Simple_repeat |
| scaffold34335 |
77481 |
77523 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold34335 |
77696 |
77760 |
+ |
(TTT)n |
Simple_repeat |
| scaffold34335 |
78524 |
78620 |
+ |
(CCACAA)n |
Simple_repeat |
| scaffold34335 |
79400 |
79624 |
- |
RS347 |
Unspecified |