scaffold3550 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3550 |
6 |
362 |
+ |
RS1508 |
Unspecified |
| scaffold3550 |
375 |
620 |
+ |
PL141 |
Unspecified |
| scaffold3550 |
1199 |
1392 |
+ |
RS18 |
Unspecified |
| scaffold3550 |
1939 |
2090 |
+ |
RS16926 |
Unspecified |
| scaffold3550 |
2217 |
2427 |
- |
RS41 |
Unspecified |
| scaffold3550 |
2591 |
2675 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3550 |
2708 |
2744 |
+ |
(TACTTCG)n |
Simple_repeat |
| scaffold3550 |
2929 |
2981 |
+ |
(AACTTT)n |
Simple_repeat |
| scaffold3550 |
3065 |
3098 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold3550 |
4416 |
4536 |
- |
PL601 |
Unspecified |
| scaffold3550 |
5099 |
5135 |
+ |
A-rich |
Low_complexity |
| scaffold3550 |
5300 |
5340 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold3550 |
5426 |
5691 |
- |
RS42 |
Unspecified |
| scaffold3550 |
5756 |
6044 |
- |
RS1746 |
Unspecified |
| scaffold3550 |
6047 |
6146 |
- |
RS6506 |
Unspecified |
| scaffold3550 |
6268 |
6339 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold3550 |
6576 |
6639 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold3550 |
6698 |
6759 |
+ |
A-rich |
Low_complexity |
| scaffold3550 |
6771 |
6801 |
+ |
(TAC)n |
Simple_repeat |
| scaffold3550 |
7650 |
7796 |
- |
PL754 |
Unspecified |
| scaffold3550 |
7695 |
7806 |
+ |
RS4475 |
Unspecified |
| scaffold3550 |
8134 |
8307 |
+ |
RS17600 |
Unspecified |
| scaffold3550 |
9895 |
9933 |
+ |
A-rich |
Low_complexity |
| scaffold3550 |
10194 |
10542 |
+ |
PL617 |
Unspecified |
| scaffold3550 |
14642 |
14746 |
+ |
(GCG)n |
Simple_repeat |
| scaffold3550 |
14851 |
14980 |
+ |
PL572 |
Unspecified |
| scaffold3550 |
14867 |
14980 |
- |
PL592 |
Unspecified |
| scaffold3550 |
14901 |
15514 |
- |
RS767 |
Unspecified |
| scaffold3550 |
15775 |
15847 |
- |
RS7702 |
Unspecified |
| scaffold3550 |
15841 |
15980 |
+ |
RS13709 |
Unspecified |
| scaffold3550 |
16008 |
16169 |
- |
RS4329 |
Unspecified |
| scaffold3550 |
16176 |
16216 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold3550 |
16722 |
16742 |
+ |
(T)n |
Simple_repeat |
| scaffold3550 |
17439 |
17551 |
+ |
RS1107 |
Unspecified |
| scaffold3550 |
17458 |
17588 |
+ |
RS3868 |
Unspecified |
| scaffold3550 |
17948 |
17985 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold3550 |
21542 |
21558 |
+ |
(CCA)n |
Simple_repeat |
| scaffold3550 |
22047 |
22313 |
+ |
RS26 |
Unspecified |
| scaffold3550 |
22825 |
22845 |
+ |
(A)n |
Simple_repeat |
| scaffold3550 |
23048 |
23081 |
+ |
A-rich |
Low_complexity |
| scaffold3550 |
23131 |
23158 |
+ |
(ATT)n |
Simple_repeat |
| scaffold3550 |
23228 |
23282 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold3550 |
23228 |
23426 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold3550 |
23271 |
23426 |
+ |
RS16354 |
Unspecified |
| scaffold3550 |
23970 |
24027 |
- |
SINE2-1_STu |
SINE/tRNA |
| scaffold3550 |
26191 |
26222 |
+ |
(T)n |
Simple_repeat |
| scaffold3550 |
26306 |
26354 |
+ |
A-rich |
Low_complexity |
| scaffold3550 |
26460 |
26980 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3550 |
27219 |
27260 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold3550 |
28391 |
28603 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold3550 |
28824 |
28890 |
- |
RS2034 |
Unspecified |
| scaffold3550 |
28833 |
29290 |
+ |
PL773 |
Unspecified |
| scaffold3550 |
29575 |
29827 |
- |
RS4 |
Unspecified |
| scaffold3550 |
30274 |
30326 |
- |
RS4475 |
Unspecified |
| scaffold3550 |
30429 |
30463 |
+ |
(A)n |
Simple_repeat |
| scaffold3550 |
30475 |
30540 |
+ |
(ACC)n |
Simple_repeat |
| scaffold3550 |
31468 |
31508 |
+ |
(CAT)n |
Simple_repeat |
| scaffold3550 |
33258 |
33282 |
+ |
(TATACA)n |
Simple_repeat |
| scaffold3550 |
33795 |
33832 |
+ |
(AGTACTC)n |
Simple_repeat |
| scaffold3550 |
44877 |
45040 |
+ |
PL398 |
Unspecified |