scaffold36420 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold36420 |
2 |
684 |
+ |
PL867 |
Unspecified |
| scaffold36420 |
393 |
912 |
- |
RS2918 |
Unspecified |
| scaffold36420 |
483 |
786 |
+ |
PL741 |
Unspecified |
| scaffold36420 |
767 |
807 |
+ |
PL741 |
Unspecified |
| scaffold36420 |
807 |
975 |
+ |
RS3005 |
Unspecified |
| scaffold36420 |
962 |
1058 |
+ |
PL814 |
Unspecified |
| scaffold36420 |
1059 |
3047 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold36420 |
4979 |
5025 |
+ |
(TGA)n |
Simple_repeat |
| scaffold36420 |
5192 |
5247 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold36420 |
6058 |
6143 |
+ |
A-rich |
Low_complexity |
| scaffold36420 |
6222 |
6289 |
+ |
(TTGAG)n |
Simple_repeat |
| scaffold36420 |
6803 |
6841 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold36420 |
7670 |
7699 |
+ |
(AATC)n |
Simple_repeat |
| scaffold36420 |
8257 |
8329 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold36420 |
8989 |
9063 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold36420 |
9188 |
9237 |
+ |
A-rich |
Low_complexity |
| scaffold36420 |
9779 |
9813 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold36420 |
10394 |
10438 |
+ |
GA-rich |
Low_complexity |
| scaffold36420 |
10444 |
10485 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold36420 |
10880 |
10925 |
+ |
A-rich |
Low_complexity |
| scaffold36420 |
11127 |
11387 |
+ |
RS26 |
Unspecified |
| scaffold36420 |
11384 |
11749 |
- |
PL44 |
Unspecified |
| scaffold36420 |
11425 |
11749 |
- |
RS570 |
Unspecified |
| scaffold36420 |
11749 |
12576 |
+ |
RS49 |
Unspecified |
| scaffold36420 |
12578 |
12801 |
+ |
RS265 |
Unspecified |
| scaffold36420 |
13474 |
13807 |
+ |
RS1230 |
Unspecified |
| scaffold36420 |
13860 |
13905 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold36420 |
15901 |
17891 |
+ |
RS676 |
Unspecified |
| scaffold36420 |
17795 |
18458 |
- |
RS541 |
Unspecified |
| scaffold36420 |
18489 |
18925 |
+ |
Gypsy-1_Mad-I |
LTR/Gypsy |
| scaffold36420 |
18933 |
19195 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold36420 |
20148 |
20259 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold36420 |
20268 |
20317 |
- |
RS64 |
Unspecified |
| scaffold36420 |
21184 |
21245 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold36420 |
22413 |
22441 |
+ |
(T)n |
Simple_repeat |
| scaffold36420 |
22544 |
22562 |
+ |
(T)n |
Simple_repeat |
| scaffold36420 |
24098 |
24127 |
+ |
(A)n |
Simple_repeat |
| scaffold36420 |
26641 |
26672 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold36420 |
26826 |
26871 |
+ |
GA-rich |
Low_complexity |
| scaffold36420 |
27407 |
27506 |
+ |
RS1 |
Unspecified |
| scaffold36420 |
27963 |
28198 |
- |
RS1 |
Unspecified |
| scaffold36420 |
28014 |
28198 |
- |
RS1848 |
Unspecified |
| scaffold36420 |
28363 |
28395 |
+ |
(T)n |
Simple_repeat |
| scaffold36420 |
28728 |
28767 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold36420 |
30908 |
30942 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold36420 |
31144 |
31260 |
- |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold36420 |
34306 |
34503 |
- |
RS734 |
Unspecified |
| scaffold36420 |
36189 |
36758 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold36420 |
36894 |
37344 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold36420 |
37435 |
37718 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold36420 |
37923 |
38206 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold36420 |
39316 |
40052 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold36420 |
40298 |
40350 |
+ |
(ACCCTTC)n |
Simple_repeat |
| scaffold36420 |
40380 |
41174 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold36420 |
40405 |
41018 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold36420 |
41264 |
42280 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold36420 |
42535 |
42618 |
- |
RS10669 |
Unspecified |
| scaffold36420 |
42618 |
43099 |
+ |
RS72 |
Unspecified |
| scaffold36420 |
43103 |
43125 |
+ |
(A)n |
Simple_repeat |
| scaffold36420 |
43278 |
43315 |
+ |
(A)n |
Simple_repeat |
| scaffold36420 |
43475 |
43528 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold36420 |
45088 |
45116 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold36420 |
45385 |
45414 |
+ |
(AATT)n |
Simple_repeat |
| scaffold36420 |
45897 |
45936 |
+ |
A-rich |
Low_complexity |
| scaffold36420 |
46890 |
47037 |
- |
RS12177 |
Unspecified |
| scaffold36420 |
47014 |
47219 |
- |
RS621 |
Unspecified |
| scaffold36420 |
47819 |
47847 |
+ |
(T)n |
Simple_repeat |
| scaffold36420 |
49172 |
49196 |
+ |
(ATTCG)n |
Simple_repeat |
| scaffold36420 |
49567 |
49597 |
+ |
(T)n |
Simple_repeat |
| scaffold36420 |
49780 |
50325 |
+ |
RS72 |
Unspecified |
| scaffold36420 |
50636 |
50909 |
- |
RS167 |
Unspecified |
| scaffold36420 |
51134 |
51345 |
- |
RS16888 |
Unspecified |
| scaffold36420 |
52572 |
52595 |
+ |
(A)n |
Simple_repeat |
| scaffold36420 |
52724 |
52884 |
- |
RS429 |
Unspecified |
| scaffold36420 |
54029 |
54386 |
+ |
RS3744 |
Unspecified |
| scaffold36420 |
56522 |
56553 |
+ |
(A)n |
Simple_repeat |
| scaffold36420 |
56760 |
57746 |
- |
Copia-16_ST-I |
LTR/Copia |
| scaffold36420 |
57781 |
58091 |
- |
Copia-16_ST-I |
LTR/Copia |
| scaffold36420 |
59000 |
59044 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold36420 |
61292 |
61368 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold36420 |
61369 |
61583 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold36420 |
61947 |
62223 |
+ |
RS8687 |
Unspecified |
| scaffold36420 |
62285 |
62468 |
+ |
RS2189 |
Unspecified |
| scaffold36420 |
62434 |
62537 |
+ |
RS3188 |
Unspecified |
| scaffold36420 |
62617 |
62633 |
+ |
(AT)n |
Simple_repeat |
| scaffold36420 |
63107 |
63270 |
+ |
(ACC)n |
Simple_repeat |
| scaffold36420 |
63405 |
63446 |
+ |
(TTGTCG)n |
Simple_repeat |
| scaffold36420 |
63785 |
63810 |
+ |
(TA)n |
Simple_repeat |
| scaffold36420 |
64101 |
64134 |
+ |
(TA)n |
Simple_repeat |
| scaffold36420 |
64608 |
64771 |
+ |
(ACC)n |
Simple_repeat |
| scaffold36420 |
64906 |
64947 |
+ |
(TTGTCG)n |
Simple_repeat |
| scaffold36420 |
65286 |
65311 |
+ |
(TA)n |
Simple_repeat |
| scaffold36420 |
65853 |
65894 |
+ |
(CGGC)n |
Simple_repeat |