scaffold3706 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3706 |
111 |
148 |
+ |
(TCTTTGT)n |
Simple_repeat |
| scaffold3706 |
308 |
735 |
+ |
RS3063 |
Unspecified |
| scaffold3706 |
389 |
1121 |
+ |
PL495 |
Unspecified |
| scaffold3706 |
1572 |
1609 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
1822 |
1889 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
3020 |
3123 |
+ |
(ACATAC)n |
Simple_repeat |
| scaffold3706 |
5227 |
5268 |
+ |
(AGCCCTA)n |
Simple_repeat |
| scaffold3706 |
6460 |
6800 |
- |
RS2012 |
Unspecified |
| scaffold3706 |
8231 |
8288 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold3706 |
9876 |
9910 |
+ |
(GATGAA)n |
Simple_repeat |
| scaffold3706 |
10644 |
10672 |
+ |
(TCTTC)n |
Simple_repeat |
| scaffold3706 |
11517 |
11544 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
11547 |
12729 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold3706 |
11547 |
12967 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold3706 |
12695 |
12967 |
- |
PL591 |
Unspecified |
| scaffold3706 |
12729 |
12967 |
- |
RS3897 |
Unspecified |
| scaffold3706 |
12967 |
13638 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold3706 |
12971 |
13635 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold3706 |
16121 |
16183 |
+ |
(TTG)n |
Simple_repeat |
| scaffold3706 |
17217 |
17253 |
+ |
(TGT)n |
Simple_repeat |
| scaffold3706 |
17563 |
17616 |
+ |
(TTTTCGT)n |
Simple_repeat |
| scaffold3706 |
19106 |
19141 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold3706 |
19195 |
19563 |
+ |
PL438 |
Unspecified |
| scaffold3706 |
19622 |
19638 |
+ |
(T)n |
Simple_repeat |
| scaffold3706 |
19735 |
19757 |
+ |
(T)n |
Simple_repeat |
| scaffold3706 |
19990 |
20046 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
20487 |
20528 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3706 |
20528 |
20829 |
- |
RS384 |
Unspecified |
| scaffold3706 |
20852 |
20894 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold3706 |
21300 |
21521 |
- |
RS11896 |
Unspecified |
| scaffold3706 |
23226 |
23289 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold3706 |
23898 |
24019 |
+ |
(TAA)n |
Simple_repeat |
| scaffold3706 |
24644 |
24679 |
+ |
(ACCCG)n |
Simple_repeat |
| scaffold3706 |
24917 |
24935 |
+ |
(A)n |
Simple_repeat |
| scaffold3706 |
25123 |
25717 |
- |
PL848 |
Unspecified |
| scaffold3706 |
25798 |
25844 |
+ |
(A)n |
Simple_repeat |
| scaffold3706 |
26120 |
26217 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold3706 |
26429 |
26796 |
+ |
RS8 |
Unspecified |
| scaffold3706 |
27793 |
27825 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3706 |
27826 |
27832 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold3706 |
27916 |
27986 |
+ |
PL169 |
Unspecified |
| scaffold3706 |
27980 |
28358 |
- |
RS633 |
Unspecified |
| scaffold3706 |
28339 |
28522 |
- |
RS633 |
Unspecified |
| scaffold3706 |
28766 |
29166 |
+ |
(AT)n |
Simple_repeat |
| scaffold3706 |
29112 |
29166 |
+ |
(AT)n |
Simple_repeat |
| scaffold3706 |
29112 |
29291 |
+ |
(AT)n |
Simple_repeat |
| scaffold3706 |
29160 |
29291 |
- |
PL850 |
Unspecified |
| scaffold3706 |
29315 |
29343 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold3706 |
29354 |
30539 |
- |
PL850 |
Unspecified |
| scaffold3706 |
30749 |
30811 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
31499 |
31564 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold3706 |
31653 |
31716 |
+ |
GA-rich |
Low_complexity |
| scaffold3706 |
31819 |
31841 |
+ |
(AGT)n |
Simple_repeat |
| scaffold3706 |
32067 |
32776 |
- |
PL44 |
Unspecified |
| scaffold3706 |
32776 |
33169 |
+ |
RS1834 |
Unspecified |
| scaffold3706 |
33595 |
33630 |
+ |
(ACCCG)n |
Simple_repeat |
| scaffold3706 |
36570 |
36827 |
- |
STOWAWAY8_OS |
DNA/TcMar-Stowaway |
| scaffold3706 |
38071 |
38134 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold3706 |
38335 |
38739 |
+ |
RS10296 |
Unspecified |
| scaffold3706 |
38848 |
38891 |
+ |
(TATT)n |
Simple_repeat |
| scaffold3706 |
39320 |
39533 |
+ |
RS748 |
Unspecified |
| scaffold3706 |
39531 |
39803 |
+ |
RS748 |
Unspecified |
| scaffold3706 |
40091 |
40163 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold3706 |
43663 |
43700 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
44298 |
44501 |
- |
RS741 |
Unspecified |
| scaffold3706 |
44476 |
44840 |
- |
RS944 |
Unspecified |
| scaffold3706 |
45248 |
45299 |
- |
AT10MU1 |
DNA/MULE-MuDR |
| scaffold3706 |
45812 |
46684 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold3706 |
45870 |
46172 |
- |
MuDR-7_Mad |
DNA/MULE-MuDR |
| scaffold3706 |
46884 |
46926 |
+ |
(TCATCT)n |
Simple_repeat |
| scaffold3706 |
47023 |
47073 |
+ |
(TTTTGTC)n |
Simple_repeat |
| scaffold3706 |
47049 |
47083 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold3706 |
48040 |
48090 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold3706 |
48436 |
48547 |
- |
RS8753 |
Unspecified |
| scaffold3706 |
48948 |
48994 |
- |
RS1220 |
Unspecified |
| scaffold3706 |
49069 |
49207 |
- |
RS1089 |
Unspecified |
| scaffold3706 |
49965 |
50021 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold3706 |
50908 |
50980 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3706 |
50981 |
51122 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3706 |
52847 |
52900 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold3706 |
53417 |
53501 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold3706 |
53990 |
54025 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3706 |
54233 |
54276 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold3706 |
54756 |
54921 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3706 |
55718 |
55773 |
+ |
Helitron-N3_ZM |
RC/Helitron |
| scaffold3706 |
58274 |
58383 |
- |
RS573 |
Unspecified |
| scaffold3706 |
58858 |
58902 |
- |
Gypsy-126_SBi-I |
LTR/Gypsy |
| scaffold3706 |
61999 |
62153 |
- |
PL517 |
Unspecified |
| scaffold3706 |
65445 |
65636 |
+ |
PL700 |
Unspecified |
| scaffold3706 |
66532 |
66637 |
- |
PL539 |
Unspecified |
| scaffold3706 |
66639 |
66728 |
+ |
RS1351 |
Unspecified |
| scaffold3706 |
66719 |
66776 |
+ |
PL539 |
Unspecified |
| scaffold3706 |
66912 |
66942 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold3706 |
67131 |
67197 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold3706 |
67577 |
67743 |
+ |
RS35 |
Unspecified |
| scaffold3706 |
68470 |
68688 |
+ |
PL727 |
Unspecified |
| scaffold3706 |
68689 |
68812 |
+ |
PL727 |
Unspecified |
| scaffold3706 |
68924 |
69017 |
- |
RS16382 |
Unspecified |
| scaffold3706 |
69031 |
69069 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold3706 |
69379 |
69406 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3706 |
69610 |
69634 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold3706 |
70698 |
71009 |
+ |
RS513 |
Unspecified |
| scaffold3706 |
71214 |
71327 |
+ |
RS18376 |
Unspecified |
| scaffold3706 |
71430 |
71515 |
+ |
RS14475 |
Unspecified |
| scaffold3706 |
71516 |
71643 |
- |
RS888 |
Unspecified |
| scaffold3706 |
72308 |
72490 |
- |
RS178 |
Unspecified |
| scaffold3706 |
72722 |
72835 |
+ |
RS18376 |
Unspecified |
| scaffold3706 |
73142 |
73219 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold3706 |
73233 |
73316 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold3706 |
73436 |
73453 |
+ |
(A)n |
Simple_repeat |
| scaffold3706 |
75004 |
75511 |
- |
RS2941 |
Unspecified |
| scaffold3706 |
75406 |
75662 |
- |
RS4801 |
Unspecified |
| scaffold3706 |
75605 |
75685 |
- |
RS8454 |
Unspecified |
| scaffold3706 |
75811 |
76053 |
- |
RS5762 |
Unspecified |
| scaffold3706 |
76735 |
76857 |
+ |
RS13929 |
Unspecified |
| scaffold3706 |
76762 |
76867 |
+ |
RS4475 |
Unspecified |
| scaffold3706 |
76764 |
76857 |
- |
RS16382 |
Unspecified |
| scaffold3706 |
76862 |
76904 |
+ |
RS17119 |
Unspecified |
| scaffold3706 |
77884 |
77906 |
+ |
(T)n |
Simple_repeat |
| scaffold3706 |
78127 |
78180 |
+ |
(TCCATC)n |
Simple_repeat |
| scaffold3706 |
78491 |
78542 |
+ |
(CTG)n |
Simple_repeat |
| scaffold3706 |
78951 |
79067 |
+ |
RS16515 |
Unspecified |
| scaffold3706 |
79174 |
79260 |
+ |
(GCGACG)n |
Simple_repeat |
| scaffold3706 |
79516 |
79545 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3706 |
79690 |
79790 |
+ |
RS15347 |
Unspecified |
| scaffold3706 |
79806 |
79835 |
+ |
(T)n |
Simple_repeat |
| scaffold3706 |
80083 |
80169 |
+ |
PL21 |
Unspecified |
| scaffold3706 |
80289 |
80334 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold3706 |
80344 |
80407 |
+ |
HAT-N9_Mad |
DNA/hAT-Ac |
| scaffold3706 |
80584 |
80764 |
+ |
RS901 |
Unspecified |
| scaffold3706 |
80878 |
80894 |
+ |
(T)n |
Simple_repeat |
| scaffold3706 |
81614 |
81654 |
+ |
(TATCAA)n |
Simple_repeat |
| scaffold3706 |
84313 |
84346 |
+ |
A-rich |
Low_complexity |
| scaffold3706 |
86374 |
86403 |
+ |
(AAACCCT)n |
Simple_repeat |