scaffold3739 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3739 |
1 |
39 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3739 |
38 |
258 |
+ |
RS1298 |
Unspecified |
| scaffold3739 |
39 |
306 |
+ |
RS10417 |
Unspecified |
| scaffold3739 |
346 |
530 |
+ |
RS13774 |
Unspecified |
| scaffold3739 |
476 |
580 |
- |
RS4359 |
Unspecified |
| scaffold3739 |
501 |
1120 |
+ |
RS1868 |
Unspecified |
| scaffold3739 |
1119 |
1220 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3739 |
1119 |
2328 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3739 |
1209 |
2328 |
- |
PL326 |
Unspecified |
| scaffold3739 |
2760 |
3134 |
+ |
RS322 |
Unspecified |
| scaffold3739 |
4115 |
4211 |
- |
RS285 |
Unspecified |
| scaffold3739 |
4338 |
4456 |
- |
RS16382 |
Unspecified |
| scaffold3739 |
4619 |
4645 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
4993 |
5016 |
+ |
(ACA)n |
Simple_repeat |
| scaffold3739 |
6200 |
6232 |
+ |
(TGAG)n |
Simple_repeat |
| scaffold3739 |
6513 |
6551 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold3739 |
6633 |
6667 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold3739 |
6945 |
6973 |
+ |
(TCA)n |
Simple_repeat |
| scaffold3739 |
10277 |
10329 |
+ |
(CAATAT)n |
Simple_repeat |
| scaffold3739 |
11960 |
12069 |
- |
ATHAT1 |
DNA/hAT-Ac |
| scaffold3739 |
15157 |
15179 |
+ |
(AAG)n |
Simple_repeat |
| scaffold3739 |
17969 |
18151 |
+ |
GA-rich |
Low_complexity |
| scaffold3739 |
18159 |
18186 |
+ |
(GTG)n |
Simple_repeat |
| scaffold3739 |
18997 |
19348 |
+ |
RS221 |
Unspecified |
| scaffold3739 |
21151 |
21178 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold3739 |
22921 |
22939 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
25305 |
25334 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
26978 |
27007 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
27772 |
27789 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
28807 |
28886 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold3739 |
29210 |
29231 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
29288 |
29333 |
+ |
RS7001 |
Unspecified |
| scaffold3739 |
30398 |
30426 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
32416 |
32435 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
36717 |
36755 |
+ |
(TCTC)n |
Simple_repeat |
| scaffold3739 |
37220 |
37267 |
- |
RTE-1_PD |
LINE/RTE-BovB |
| scaffold3739 |
40926 |
40965 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold3739 |
41133 |
41213 |
+ |
(ATT)n |
Simple_repeat |
| scaffold3739 |
41252 |
41294 |
+ |
(TAC)n |
Simple_repeat |
| scaffold3739 |
41439 |
41498 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold3739 |
42100 |
42797 |
+ |
PL504 |
Unspecified |
| scaffold3739 |
43019 |
43051 |
+ |
(CT)n |
Simple_repeat |
| scaffold3739 |
43082 |
43201 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold3739 |
45107 |
45415 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold3739 |
45167 |
45396 |
+ |
(ATG)n |
Simple_repeat |
| scaffold3739 |
48443 |
48474 |
+ |
(TTC)n |
Simple_repeat |
| scaffold3739 |
48913 |
48933 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
51402 |
51433 |
- |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold3739 |
51865 |
51910 |
+ |
(GTG)n |
Simple_repeat |
| scaffold3739 |
52139 |
52561 |
+ |
PL402 |
Unspecified |
| scaffold3739 |
52618 |
52695 |
- |
PL288 |
Unspecified |
| scaffold3739 |
52797 |
52888 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold3739 |
53111 |
53315 |
- |
RS28 |
Unspecified |
| scaffold3739 |
56503 |
56553 |
+ |
(ACACG)n |
Simple_repeat |
| scaffold3739 |
57463 |
57572 |
- |
RS26 |
Unspecified |
| scaffold3739 |
58885 |
59339 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold3739 |
59266 |
59282 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
59349 |
59386 |
+ |
(AACAC)n |
Simple_repeat |
| scaffold3739 |
59787 |
60086 |
+ |
RS1933 |
Unspecified |
| scaffold3739 |
59873 |
60119 |
- |
RS7268 |
Unspecified |
| scaffold3739 |
60123 |
60172 |
+ |
A-rich |
Low_complexity |
| scaffold3739 |
61257 |
61344 |
+ |
(AACTC)n |
Simple_repeat |
| scaffold3739 |
63338 |
63372 |
+ |
(AT)n |
Simple_repeat |
| scaffold3739 |
63881 |
64008 |
- |
RS180 |
Unspecified |
| scaffold3739 |
64133 |
64168 |
+ |
(TC)n |
Simple_repeat |
| scaffold3739 |
64356 |
64520 |
- |
RS180 |
Unspecified |
| scaffold3739 |
64511 |
65257 |
- |
PL21 |
Unspecified |
| scaffold3739 |
65255 |
65521 |
- |
RS180 |
Unspecified |
| scaffold3739 |
65749 |
65786 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold3739 |
65879 |
65924 |
+ |
A-rich |
Low_complexity |
| scaffold3739 |
66027 |
66067 |
+ |
(TAGTTT)n |
Simple_repeat |
| scaffold3739 |
66417 |
66571 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold3739 |
66571 |
67155 |
+ |
PL509 |
Unspecified |
| scaffold3739 |
67825 |
68190 |
- |
RS8 |
Unspecified |
| scaffold3739 |
68827 |
68904 |
+ |
(TAT)n |
Simple_repeat |
| scaffold3739 |
69250 |
69281 |
+ |
(CACAA)n |
Simple_repeat |
| scaffold3739 |
70818 |
70834 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
71247 |
71471 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold3739 |
71696 |
71861 |
- |
RS133 |
Unspecified |
| scaffold3739 |
72600 |
72867 |
- |
RS106 |
Unspecified |
| scaffold3739 |
72966 |
73122 |
+ |
RS79 |
Unspecified |
| scaffold3739 |
73099 |
73205 |
+ |
RS3756 |
Unspecified |
| scaffold3739 |
73123 |
73219 |
+ |
RS79 |
Unspecified |
| scaffold3739 |
74443 |
74515 |
+ |
RS4520 |
Unspecified |
| scaffold3739 |
75034 |
75227 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3739 |
75530 |
75546 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
75634 |
75671 |
- |
Copia-32_BD-I |
LTR/Copia |
| scaffold3739 |
75796 |
75845 |
+ |
(CTAACTA)n |
Simple_repeat |
| scaffold3739 |
75922 |
75964 |
+ |
(TATATAG)n |
Simple_repeat |
| scaffold3739 |
75961 |
76214 |
+ |
RS47 |
Unspecified |
| scaffold3739 |
76216 |
76280 |
- |
RS361 |
Unspecified |
| scaffold3739 |
78764 |
78887 |
+ |
RS12685 |
Unspecified |
| scaffold3739 |
79877 |
79976 |
+ |
RS11295 |
Unspecified |
| scaffold3739 |
80624 |
80653 |
+ |
(GAA)n |
Simple_repeat |
| scaffold3739 |
81012 |
81028 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
81371 |
81494 |
+ |
RS12685 |
Unspecified |
| scaffold3739 |
82277 |
82376 |
+ |
RS11295 |
Unspecified |
| scaffold3739 |
82481 |
82574 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3739 |
82746 |
82801 |
+ |
(AGCTGAA)n |
Simple_repeat |
| scaffold3739 |
83296 |
83334 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold3739 |
84267 |
84536 |
+ |
RS1 |
Unspecified |
| scaffold3739 |
84786 |
84820 |
+ |
(TTAACC)n |
Simple_repeat |
| scaffold3739 |
84908 |
84958 |
+ |
A-rich |
Low_complexity |
| scaffold3739 |
85216 |
85251 |
+ |
(ATAAATTA)n |
Simple_repeat |
| scaffold3739 |
85383 |
85478 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3739 |
86031 |
86065 |
+ |
A-rich |
Low_complexity |
| scaffold3739 |
86824 |
86866 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold3739 |
87070 |
87134 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold3739 |
87144 |
87219 |
- |
RS745 |
Unspecified |
| scaffold3739 |
87318 |
87339 |
+ |
(AGC)n |
Simple_repeat |
| scaffold3739 |
89708 |
89871 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
90888 |
91342 |
+ |
PL582 |
Unspecified |
| scaffold3739 |
92035 |
92073 |
+ |
(AAG)n |
Simple_repeat |
| scaffold3739 |
92074 |
92092 |
+ |
(GAG)n |
Simple_repeat |
| scaffold3739 |
92249 |
92335 |
- |
Copia-52_BRa-I |
LTR/Copia |
| scaffold3739 |
92861 |
92912 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3739 |
92984 |
93135 |
- |
Copia-52_BRa-I |
LTR/Copia |
| scaffold3739 |
93023 |
93135 |
- |
Copia-52_BRa-I |
LTR/Copia |
| scaffold3739 |
93158 |
93330 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold3739 |
93340 |
93672 |
- |
Copia-52_BRa-I |
LTR/Copia |
| scaffold3739 |
94281 |
94444 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
95608 |
95635 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
95946 |
95999 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3739 |
96020 |
96187 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
97514 |
97613 |
+ |
RS132 |
Unspecified |
| scaffold3739 |
97610 |
97739 |
- |
RS4595 |
Unspecified |
| scaffold3739 |
97630 |
97936 |
- |
RS971 |
Unspecified |
| scaffold3739 |
98475 |
98507 |
+ |
(TTACTT)n |
Simple_repeat |
| scaffold3739 |
98852 |
99023 |
- |
RS134 |
Unspecified |
| scaffold3739 |
99024 |
99241 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold3739 |
99518 |
99642 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold3739 |
99549 |
99658 |
- |
ZhAT8_ZM |
DNA/hAT-Ac |
| scaffold3739 |
100166 |
100214 |
+ |
(TA)n |
Simple_repeat |
| scaffold3739 |
103464 |
103514 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3739 |
104239 |
104351 |
- |
RS9860 |
Unspecified |
| scaffold3739 |
104247 |
104371 |
+ |
RS3580 |
Unspecified |
| scaffold3739 |
104262 |
104513 |
- |
RS725 |
Unspecified |
| scaffold3739 |
104604 |
104702 |
- |
RS5111 |
Unspecified |
| scaffold3739 |
104699 |
104956 |
- |
RS1 |
Unspecified |
| scaffold3739 |
104952 |
105189 |
- |
RS1638 |
Unspecified |
| scaffold3739 |
105203 |
105601 |
- |
RS729 |
Unspecified |
| scaffold3739 |
106029 |
106122 |
+ |
RS3427 |
Unspecified |
| scaffold3739 |
106077 |
106130 |
+ |
RS12014 |
Unspecified |
| scaffold3739 |
106118 |
106184 |
- |
RS4 |
Unspecified |
| scaffold3739 |
106118 |
106192 |
+ |
RS3427 |
Unspecified |
| scaffold3739 |
106190 |
106271 |
- |
PL169 |
Unspecified |
| scaffold3739 |
106270 |
106295 |
+ |
(TTG)n |
Simple_repeat |
| scaffold3739 |
106457 |
106497 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3739 |
106717 |
106738 |
+ |
(AGC)n |
Simple_repeat |
| scaffold3739 |
108585 |
109145 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold3739 |
109168 |
109499 |
- |
RS805 |
Unspecified |
| scaffold3739 |
109901 |
110312 |
- |
Copia-52_BRa-I |
LTR/Copia |
| scaffold3739 |
110920 |
111083 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
112063 |
112148 |
+ |
PL261 |
Unspecified |
| scaffold3739 |
112153 |
112358 |
- |
RS282 |
Unspecified |
| scaffold3739 |
112394 |
112435 |
+ |
(T)n |
Simple_repeat |
| scaffold3739 |
112554 |
112665 |
- |
RS14614 |
Unspecified |
| scaffold3739 |
112567 |
112712 |
+ |
RS2735 |
Unspecified |
| scaffold3739 |
112889 |
112937 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold3739 |
112982 |
113011 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
114247 |
114279 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3739 |
114302 |
114469 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
116273 |
116344 |
+ |
RS18111 |
Unspecified |
| scaffold3739 |
116629 |
116671 |
+ |
(A)n |
Simple_repeat |
| scaffold3739 |
117223 |
117254 |
+ |
(TCAGT)n |
Simple_repeat |
| scaffold3739 |
117283 |
117450 |
+ |
RS12052 |
Unspecified |
| scaffold3739 |
117645 |
117825 |
- |
PL171 |
Unspecified |
| scaffold3739 |
118411 |
118500 |
+ |
(TAA)n |
Simple_repeat |
| scaffold3739 |
118519 |
118618 |
- |
RS16382 |
Unspecified |
| scaffold3739 |
118619 |
118694 |
+ |
(TA)n |
Simple_repeat |
| scaffold3739 |
118655 |
118694 |
+ |
(TA)n |
Simple_repeat |