scaffold3817 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3817 |
277 |
390 |
- |
PL24 |
Unspecified |
| scaffold3817 |
378 |
438 |
- |
PL24 |
Unspecified |
| scaffold3817 |
572 |
603 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
2728 |
2943 |
+ |
RS10626 |
Unspecified |
| scaffold3817 |
4080 |
4306 |
+ |
Copia-65_ST-I |
LTR/Copia |
| scaffold3817 |
4491 |
5395 |
+ |
Copia-55_ST-I |
LTR/Copia |
| scaffold3817 |
5580 |
5627 |
+ |
GA-rich |
Low_complexity |
| scaffold3817 |
5808 |
7400 |
+ |
Copia-7_CP-I |
LTR/Copia |
| scaffold3817 |
7399 |
7673 |
+ |
RS9845 |
Unspecified |
| scaffold3817 |
7693 |
7742 |
+ |
RS10626 |
Unspecified |
| scaffold3817 |
8644 |
8734 |
+ |
RS6148 |
Unspecified |
| scaffold3817 |
10448 |
10550 |
+ |
RS16263 |
Unspecified |
| scaffold3817 |
10639 |
11332 |
+ |
RS12460 |
Unspecified |
| scaffold3817 |
11360 |
11390 |
+ |
(AGTG)n |
Simple_repeat |
| scaffold3817 |
11508 |
11544 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
11888 |
11922 |
+ |
(CCCTCC)n |
Simple_repeat |
| scaffold3817 |
12011 |
12051 |
+ |
(GTTTGTG)n |
Simple_repeat |
| scaffold3817 |
12277 |
12303 |
+ |
(AATA)n |
Simple_repeat |
| scaffold3817 |
12651 |
12690 |
+ |
(ATGG)n |
Simple_repeat |
| scaffold3817 |
12895 |
12933 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
13001 |
13047 |
+ |
(GGAT)n |
Simple_repeat |
| scaffold3817 |
13407 |
13493 |
- |
RS2360 |
Unspecified |
| scaffold3817 |
13564 |
13745 |
- |
RS79 |
Unspecified |
| scaffold3817 |
13854 |
13881 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3817 |
14436 |
14457 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
14483 |
14668 |
- |
RS507 |
Unspecified |
| scaffold3817 |
15455 |
15474 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
18117 |
18374 |
+ |
RS17975 |
Unspecified |
| scaffold3817 |
18434 |
18633 |
+ |
RS17429 |
Unspecified |
| scaffold3817 |
18714 |
18776 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold3817 |
18951 |
19014 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
19121 |
19396 |
+ |
RS3438 |
Unspecified |
| scaffold3817 |
19449 |
19706 |
+ |
RS17975 |
Unspecified |
| scaffold3817 |
19766 |
19965 |
+ |
RS17429 |
Unspecified |
| scaffold3817 |
20161 |
20220 |
- |
RS18012 |
Unspecified |
| scaffold3817 |
20168 |
20297 |
+ |
RS38 |
Unspecified |
| scaffold3817 |
20587 |
20630 |
+ |
(AATA)n |
Simple_repeat |
| scaffold3817 |
21205 |
21953 |
+ |
RS1183 |
Unspecified |
| scaffold3817 |
21986 |
22192 |
+ |
RS1637 |
Unspecified |
| scaffold3817 |
22152 |
22362 |
+ |
RS12350 |
Unspecified |
| scaffold3817 |
26384 |
26524 |
+ |
RS7460 |
Unspecified |
| scaffold3817 |
30179 |
30261 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
30438 |
30648 |
- |
RS959 |
Unspecified |
| scaffold3817 |
30579 |
30918 |
- |
RS959 |
Unspecified |
| scaffold3817 |
30946 |
31153 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3817 |
31671 |
32549 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
31671 |
31710 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
31702 |
32549 |
- |
RS514 |
Unspecified |
| scaffold3817 |
31744 |
32453 |
- |
RS3091 |
Unspecified |
| scaffold3817 |
33025 |
33086 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3817 |
33359 |
33393 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
35872 |
36146 |
+ |
PL139 |
Unspecified |
| scaffold3817 |
36092 |
36158 |
+ |
RS1172 |
Unspecified |
| scaffold3817 |
36260 |
36381 |
+ |
PL283 |
Unspecified |
| scaffold3817 |
36357 |
36797 |
+ |
PL580 |
Unspecified |
| scaffold3817 |
36991 |
37113 |
+ |
RS11340 |
Unspecified |
| scaffold3817 |
37861 |
38097 |
+ |
RS1743 |
Unspecified |
| scaffold3817 |
38386 |
38412 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold3817 |
38905 |
38971 |
- |
PL139 |
Unspecified |
| scaffold3817 |
38913 |
39060 |
+ |
RS14780 |
Unspecified |
| scaffold3817 |
39370 |
39536 |
- |
RS4494 |
Unspecified |
| scaffold3817 |
39815 |
39844 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
40232 |
40286 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3817 |
40329 |
40471 |
- |
RS520 |
Unspecified |
| scaffold3817 |
40565 |
40629 |
+ |
(GAATTTA)n |
Simple_repeat |
| scaffold3817 |
40914 |
41053 |
- |
RS274 |
Unspecified |
| scaffold3817 |
43764 |
43929 |
- |
RS3332 |
Unspecified |
| scaffold3817 |
43836 |
44004 |
- |
RS8365 |
Unspecified |
| scaffold3817 |
43845 |
44038 |
+ |
RS8684 |
Unspecified |
| scaffold3817 |
44293 |
44416 |
- |
RS4274 |
Unspecified |
| scaffold3817 |
44309 |
44463 |
+ |
RS1052 |
Unspecified |
| scaffold3817 |
44655 |
44693 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
44981 |
45004 |
+ |
(GA)n |
Simple_repeat |
| scaffold3817 |
45010 |
45056 |
+ |
(GGT)n |
Simple_repeat |
| scaffold3817 |
45091 |
45197 |
+ |
(TTG)n |
Simple_repeat |
| scaffold3817 |
45223 |
45264 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
45437 |
45496 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold3817 |
46064 |
46204 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold3817 |
46915 |
47112 |
+ |
RS12715 |
Unspecified |
| scaffold3817 |
47364 |
47463 |
+ |
RS5189 |
Unspecified |
| scaffold3817 |
47759 |
47840 |
- |
STOWAWAY12_SB |
DNA/TcMar-Stowaway |
| scaffold3817 |
47839 |
47921 |
+ |
RS4739 |
Unspecified |
| scaffold3817 |
47941 |
48059 |
- |
RS5449 |
Unspecified |
| scaffold3817 |
47966 |
48077 |
- |
RS6922 |
Unspecified |
| scaffold3817 |
48180 |
48468 |
+ |
RS13058 |
Unspecified |
| scaffold3817 |
48655 |
49190 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold3817 |
49115 |
49190 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold3817 |
49461 |
49501 |
+ |
(TCATCAA)n |
Simple_repeat |
| scaffold3817 |
49562 |
49646 |
+ |
(CTT)n |
Simple_repeat |
| scaffold3817 |
52330 |
52365 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
52461 |
52486 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
52593 |
52760 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold3817 |
52833 |
54246 |
+ |
LINE1-60_SBi |
LINE/L1 |
| scaffold3817 |
56023 |
56040 |
+ |
(A)n |
Simple_repeat |
| scaffold3817 |
59036 |
59176 |
- |
RS41 |
Unspecified |
| scaffold3817 |
59249 |
59524 |
+ |
RS96 |
Unspecified |
| scaffold3817 |
60601 |
60617 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
60650 |
60791 |
+ |
RS5964 |
Unspecified |
| scaffold3817 |
60931 |
60949 |
+ |
(A)n |
Simple_repeat |
| scaffold3817 |
62539 |
62964 |
+ |
PL47 |
Unspecified |
| scaffold3817 |
63193 |
63268 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3817 |
63317 |
63443 |
+ |
RS13717 |
Unspecified |
| scaffold3817 |
63487 |
63516 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
63982 |
64246 |
- |
RS550 |
Unspecified |
| scaffold3817 |
64248 |
64810 |
- |
RS2712 |
Unspecified |
| scaffold3817 |
65193 |
65279 |
+ |
(ATG)n |
Simple_repeat |
| scaffold3817 |
66340 |
66356 |
+ |
(T)n |
Simple_repeat |
| scaffold3817 |
66356 |
66387 |
+ |
(TAA)n |
Simple_repeat |
| scaffold3817 |
67227 |
67272 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold3817 |
67554 |
67599 |
+ |
(CAATA)n |
Simple_repeat |
| scaffold3817 |
67856 |
67909 |
+ |
A-rich |
Low_complexity |
| scaffold3817 |
68481 |
68532 |
+ |
(AAGATAA)n |
Simple_repeat |