scaffold38356 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold38356 |
1 |
219 |
- |
RS869 |
Unspecified |
| scaffold38356 |
457 |
474 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
915 |
965 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold38356 |
1354 |
1383 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
1618 |
1884 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold38356 |
2183 |
2380 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold38356 |
2381 |
2404 |
+ |
ATCOPIN_LTR |
LTR |
| scaffold38356 |
3744 |
3767 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
3825 |
3970 |
+ |
RS14433 |
Unspecified |
| scaffold38356 |
4097 |
4526 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
4097 |
4124 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
4112 |
4526 |
+ |
RS6793 |
Unspecified |
| scaffold38356 |
4738 |
4786 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold38356 |
5051 |
5966 |
- |
PL771 |
Unspecified |
| scaffold38356 |
7959 |
8058 |
+ |
RS253 |
Unspecified |
| scaffold38356 |
7971 |
8446 |
- |
RS5460 |
Unspecified |
| scaffold38356 |
8644 |
8662 |
+ |
(TA)n |
Simple_repeat |
| scaffold38356 |
8697 |
9124 |
+ |
RS10486 |
Unspecified |
| scaffold38356 |
9974 |
10142 |
- |
RS1361 |
Unspecified |
| scaffold38356 |
10128 |
10751 |
+ |
RS76 |
Unspecified |
| scaffold38356 |
11189 |
11209 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold38356 |
11547 |
11568 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold38356 |
13261 |
13295 |
+ |
(CACGAAA)n |
Simple_repeat |
| scaffold38356 |
13437 |
14485 |
+ |
RS655 |
Unspecified |
| scaffold38356 |
15256 |
15382 |
- |
RS13315 |
Unspecified |
| scaffold38356 |
15619 |
15668 |
+ |
(TTGTTTA)n |
Simple_repeat |
| scaffold38356 |
15812 |
15849 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold38356 |
16274 |
16359 |
+ |
RS581 |
Unspecified |
| scaffold38356 |
16358 |
17341 |
+ |
PL807 |
Unspecified |
| scaffold38356 |
17340 |
17518 |
+ |
RS581 |
Unspecified |
| scaffold38356 |
17653 |
17865 |
+ |
(TGTAA)n |
Simple_repeat |
| scaffold38356 |
19832 |
19919 |
- |
PL754 |
Unspecified |
| scaffold38356 |
20022 |
20327 |
- |
RS518 |
Unspecified |
| scaffold38356 |
20619 |
20768 |
+ |
RS38 |
Unspecified |
| scaffold38356 |
20854 |
20886 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold38356 |
21698 |
21732 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
21800 |
21827 |
+ |
(TTA)n |
Simple_repeat |
| scaffold38356 |
23470 |
23511 |
+ |
(TAA)n |
Simple_repeat |
| scaffold38356 |
23769 |
23818 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold38356 |
24372 |
24518 |
+ |
(TAT)n |
Simple_repeat |
| scaffold38356 |
24576 |
24626 |
+ |
(TATTATAT)n |
Simple_repeat |
| scaffold38356 |
24801 |
24844 |
+ |
(ATTGAA)n |
Simple_repeat |
| scaffold38356 |
25874 |
25908 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold38356 |
27018 |
27515 |
- |
RS248 |
Unspecified |
| scaffold38356 |
27794 |
27970 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold38356 |
28464 |
28497 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold38356 |
28464 |
28685 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold38356 |
28486 |
28685 |
+ |
RS943 |
Unspecified |
| scaffold38356 |
28746 |
28989 |
- |
RS3865 |
Unspecified |
| scaffold38356 |
28988 |
29234 |
- |
RS193 |
Unspecified |
| scaffold38356 |
29229 |
29489 |
+ |
RS2601 |
Unspecified |
| scaffold38356 |
29413 |
30019 |
+ |
RS2003 |
Unspecified |
| scaffold38356 |
29825 |
30566 |
- |
RS1870 |
Unspecified |
| scaffold38356 |
30679 |
30704 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
30721 |
31104 |
- |
RS12148 |
Unspecified |
| scaffold38356 |
31096 |
31375 |
- |
PL9 |
Unspecified |
| scaffold38356 |
31514 |
31541 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
31761 |
31797 |
+ |
(ATGTG)n |
Simple_repeat |
| scaffold38356 |
32171 |
32237 |
+ |
(TTTAATCA)n |
Simple_repeat |
| scaffold38356 |
34037 |
34079 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
35760 |
35799 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold38356 |
35849 |
36049 |
+ |
RS3541 |
Unspecified |
| scaffold38356 |
36052 |
36129 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold38356 |
36195 |
36232 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
36356 |
36486 |
- |
RS10051 |
Unspecified |
| scaffold38356 |
36607 |
36670 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
37386 |
37415 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
37866 |
38022 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold38356 |
38087 |
38112 |
+ |
(ATGTG)n |
Simple_repeat |
| scaffold38356 |
38393 |
38443 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
38574 |
38940 |
- |
RS8 |
Unspecified |
| scaffold38356 |
39074 |
39169 |
- |
RS4475 |
Unspecified |
| scaffold38356 |
39505 |
39926 |
- |
PL631 |
Unspecified |
| scaffold38356 |
42115 |
42137 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
42755 |
43232 |
- |
RS257 |
Unspecified |
| scaffold38356 |
43518 |
43576 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
43858 |
43879 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
45209 |
45238 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold38356 |
45795 |
45840 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold38356 |
46990 |
47016 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold38356 |
47143 |
47257 |
+ |
RS3123 |
Unspecified |
| scaffold38356 |
47746 |
47801 |
+ |
(AAAACTTCAG)n |
Simple_repeat |
| scaffold38356 |
47811 |
47869 |
+ |
(ATT)n |
Simple_repeat |
| scaffold38356 |
47881 |
47983 |
+ |
RS1323 |
Unspecified |
| scaffold38356 |
47943 |
48048 |
+ |
RS1323 |
Unspecified |
| scaffold38356 |
51049 |
51094 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
54778 |
54970 |
- |
Copia-79_BRa-I |
LTR/Copia |
| scaffold38356 |
56118 |
56281 |
- |
RS1773 |
Unspecified |
| scaffold38356 |
57494 |
57520 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
58347 |
58376 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
60601 |
60733 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold38356 |
60735 |
60780 |
+ |
RS17699 |
Unspecified |
| scaffold38356 |
60775 |
60964 |
- |
RS704 |
Unspecified |
| scaffold38356 |
60838 |
60962 |
+ |
RS8894 |
Unspecified |
| scaffold38356 |
61317 |
61348 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
63657 |
63695 |
+ |
A-rich |
Low_complexity |
| scaffold38356 |
64171 |
64220 |
+ |
(ACTCGTG)n |
Simple_repeat |
| scaffold38356 |
64626 |
64702 |
- |
PL398 |
Unspecified |
| scaffold38356 |
65029 |
65082 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold38356 |
65096 |
65162 |
+ |
(TAA)n |
Simple_repeat |
| scaffold38356 |
65232 |
65262 |
+ |
(AATT)n |
Simple_repeat |
| scaffold38356 |
65389 |
65461 |
+ |
(ATT)n |
Simple_repeat |
| scaffold38356 |
65683 |
65951 |
- |
RS1 |
Unspecified |
| scaffold38356 |
66033 |
66174 |
+ |
RS4505 |
Unspecified |
| scaffold38356 |
70141 |
70176 |
+ |
(T)n |
Simple_repeat |
| scaffold38356 |
70245 |
70284 |
+ |
(ATC)n |
Simple_repeat |
| scaffold38356 |
70372 |
70397 |
+ |
(A)n |
Simple_repeat |
| scaffold38356 |
71182 |
71231 |
+ |
(ATCC)n |
Simple_repeat |