scaffold3945 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3945 |
3 |
611 |
+ |
PL475 |
Unspecified |
| scaffold3945 |
651 |
677 |
+ |
(T)n |
Simple_repeat |
| scaffold3945 |
1275 |
1315 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
2257 |
3293 |
+ |
RS168 |
Unspecified |
| scaffold3945 |
3652 |
3675 |
+ |
(A)n |
Simple_repeat |
| scaffold3945 |
3669 |
3733 |
+ |
GA-rich |
Low_complexity |
| scaffold3945 |
3737 |
3814 |
+ |
(CAC)n |
Simple_repeat |
| scaffold3945 |
4792 |
4842 |
+ |
(GTT)n |
Simple_repeat |
| scaffold3945 |
6625 |
6658 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold3945 |
7200 |
7914 |
+ |
RS2911 |
Unspecified |
| scaffold3945 |
7439 |
8173 |
- |
RS1200 |
Unspecified |
| scaffold3945 |
7711 |
8664 |
- |
RS398 |
Unspecified |
| scaffold3945 |
9098 |
9146 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold3945 |
9685 |
9725 |
- |
Gypsy19-VV_I-int |
LTR/Gypsy |
| scaffold3945 |
10602 |
11166 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold3945 |
11318 |
11837 |
- |
RS3329 |
Unspecified |
| scaffold3945 |
12031 |
12332 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold3945 |
12482 |
12567 |
- |
Gypsy-30_GM-I |
LTR/Gypsy |
| scaffold3945 |
13865 |
13974 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold3945 |
14384 |
14461 |
+ |
(TTGAG)n |
Simple_repeat |
| scaffold3945 |
14792 |
14849 |
+ |
(GTT)n |
Simple_repeat |
| scaffold3945 |
15085 |
15134 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold3945 |
15248 |
15301 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold3945 |
15320 |
15423 |
+ |
RS756 |
Unspecified |
| scaffold3945 |
16824 |
17005 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold3945 |
17062 |
17103 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
18326 |
18429 |
+ |
RS832 |
Unspecified |
| scaffold3945 |
18423 |
20040 |
+ |
PL124 |
Unspecified |
| scaffold3945 |
20010 |
20106 |
- |
PL600 |
Unspecified |
| scaffold3945 |
20040 |
20323 |
+ |
(TG)n |
Simple_repeat |
| scaffold3945 |
20289 |
20323 |
+ |
(TG)n |
Simple_repeat |
| scaffold3945 |
21443 |
21476 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
21479 |
21738 |
- |
RS109 |
Unspecified |
| scaffold3945 |
22058 |
22138 |
+ |
(CGG)n |
Simple_repeat |
| scaffold3945 |
22476 |
22919 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold3945 |
23207 |
23632 |
+ |
PL460 |
Unspecified |
| scaffold3945 |
24649 |
25164 |
+ |
RS2892 |
Unspecified |
| scaffold3945 |
25218 |
25257 |
+ |
(TTTCAT)n |
Simple_repeat |
| scaffold3945 |
25298 |
25323 |
+ |
(TCAC)n |
Simple_repeat |
| scaffold3945 |
26780 |
27486 |
+ |
Mariner_MT |
DNA/TcMar-Stowaway |
| scaffold3945 |
27957 |
28049 |
+ |
(AATA)n |
Simple_repeat |
| scaffold3945 |
28600 |
28888 |
+ |
PL838 |
Unspecified |
| scaffold3945 |
29197 |
29246 |
+ |
(TTATATT)n |
Simple_repeat |
| scaffold3945 |
29247 |
29253 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold3945 |
30993 |
31154 |
+ |
RS2719 |
Unspecified |
| scaffold3945 |
31648 |
31823 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold3945 |
31835 |
32081 |
+ |
RS145 |
Unspecified |
| scaffold3945 |
32102 |
32368 |
+ |
RS736 |
Unspecified |
| scaffold3945 |
32470 |
32509 |
+ |
(ATA)n |
Simple_repeat |
| scaffold3945 |
32779 |
32832 |
+ |
(ACCCG)n |
Simple_repeat |
| scaffold3945 |
33242 |
33351 |
- |
PL9 |
Unspecified |
| scaffold3945 |
33439 |
33476 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
35820 |
35905 |
+ |
RS3097 |
Unspecified |
| scaffold3945 |
37408 |
37441 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold3945 |
38272 |
38315 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
39019 |
39082 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3945 |
39451 |
39493 |
+ |
(T)n |
Simple_repeat |
| scaffold3945 |
39819 |
40081 |
+ |
RS10 |
Unspecified |
| scaffold3945 |
40230 |
40298 |
+ |
(T)n |
Simple_repeat |
| scaffold3945 |
40514 |
40687 |
- |
RS648 |
Unspecified |
| scaffold3945 |
40687 |
40748 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold3945 |
41729 |
41925 |
+ |
RS921 |
Unspecified |
| scaffold3945 |
41942 |
42047 |
+ |
(GGACC)n |
Simple_repeat |
| scaffold3945 |
44028 |
44596 |
- |
RS432 |
Unspecified |
| scaffold3945 |
44717 |
44759 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
44873 |
45585 |
+ |
RS1350 |
Unspecified |
| scaffold3945 |
46084 |
46127 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold3945 |
47235 |
47510 |
+ |
RS4686 |
Unspecified |
| scaffold3945 |
47382 |
47800 |
+ |
PL143 |
Unspecified |
| scaffold3945 |
48033 |
48093 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold3945 |
48250 |
48306 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
48391 |
48448 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
48730 |
48869 |
+ |
RS4587 |
Unspecified |
| scaffold3945 |
50680 |
50840 |
+ |
RS4068 |
Unspecified |
| scaffold3945 |
50683 |
50824 |
- |
PL787 |
Unspecified |
| scaffold3945 |
50844 |
51556 |
+ |
RS2658 |
Unspecified |
| scaffold3945 |
51558 |
51955 |
+ |
RS8082 |
Unspecified |
| scaffold3945 |
51653 |
52142 |
+ |
RS4947 |
Unspecified |
| scaffold3945 |
51808 |
52254 |
- |
RS1435 |
Unspecified |
| scaffold3945 |
52245 |
52619 |
+ |
RS8 |
Unspecified |
| scaffold3945 |
52624 |
52677 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
52734 |
52782 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
52844 |
52879 |
+ |
A-rich |
Low_complexity |
| scaffold3945 |
53730 |
53759 |
+ |
(A)n |
Simple_repeat |
| scaffold3945 |
53875 |
53928 |
+ |
(GTTTTTA)n |
Simple_repeat |
| scaffold3945 |
54088 |
54140 |
+ |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold3945 |
54088 |
54264 |
+ |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold3945 |
54127 |
54264 |
- |
RS6833 |
Unspecified |
| scaffold3945 |
54287 |
54539 |
+ |
RS5322 |
Unspecified |
| scaffold3945 |
54658 |
54698 |
+ |
(CTTAATC)n |
Simple_repeat |
| scaffold3945 |
55714 |
55787 |
+ |
(TTTCTAA)n |
Simple_repeat |
| scaffold3945 |
56200 |
56216 |
+ |
(T)n |
Simple_repeat |
| scaffold3945 |
56631 |
57339 |
+ |
RS5934 |
Unspecified |
| scaffold3945 |
57147 |
57373 |
+ |
RS9513 |
Unspecified |
| scaffold3945 |
57389 |
57515 |
+ |
RS14616 |
Unspecified |
| scaffold3945 |
58050 |
58379 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold3945 |
58395 |
58527 |
- |
RS1669 |
Unspecified |
| scaffold3945 |
59262 |
59374 |
+ |
RIRE3_I-int |
LTR/Gypsy |