scaffold39573 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold39573 |
1 |
805 |
+ |
RS101 |
Unspecified |
| scaffold39573 |
89 |
147 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold39573 |
175 |
209 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold39573 |
1311 |
1538 |
+ |
RS9851 |
Unspecified |
| scaffold39573 |
2093 |
2132 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold39573 |
2317 |
2534 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold39573 |
2763 |
2799 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
3356 |
3407 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
4363 |
4392 |
+ |
(CCG)n |
Simple_repeat |
| scaffold39573 |
4418 |
4447 |
+ |
(CGG)n |
Simple_repeat |
| scaffold39573 |
8772 |
8794 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
11141 |
11183 |
+ |
(AATA)n |
Simple_repeat |
| scaffold39573 |
11262 |
11307 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
11446 |
11474 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
11481 |
11631 |
+ |
(GGATCC)n |
Simple_repeat |
| scaffold39573 |
12913 |
13034 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold39573 |
15610 |
15645 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold39573 |
16197 |
16222 |
+ |
(ACA)n |
Simple_repeat |
| scaffold39573 |
16640 |
16840 |
+ |
RS17500 |
Unspecified |
| scaffold39573 |
17051 |
17080 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold39573 |
17253 |
19468 |
- |
RS299 |
Unspecified |
| scaffold39573 |
19033 |
19543 |
- |
RS3055 |
Unspecified |
| scaffold39573 |
19574 |
19614 |
+ |
A-rich |
Low_complexity |
| scaffold39573 |
19666 |
20365 |
+ |
RS1899 |
Unspecified |
| scaffold39573 |
20657 |
20677 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
21235 |
21289 |
+ |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold39573 |
21523 |
21723 |
+ |
RS17500 |
Unspecified |
| scaffold39573 |
21934 |
21962 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold39573 |
22135 |
24350 |
- |
RS299 |
Unspecified |
| scaffold39573 |
24787 |
24829 |
+ |
(AAT)n |
Simple_repeat |
| scaffold39573 |
25328 |
25532 |
- |
RS1032 |
Unspecified |
| scaffold39573 |
25738 |
26262 |
+ |
(TCT)n |
Simple_repeat |
| scaffold39573 |
26214 |
26262 |
+ |
(TCT)n |
Simple_repeat |
| scaffold39573 |
26458 |
26780 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold39573 |
27106 |
27267 |
+ |
RS11862 |
Unspecified |
| scaffold39573 |
27344 |
27939 |
- |
PSL |
DNA/CMC-EnSpm |
| scaffold39573 |
28106 |
28390 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold39573 |
28595 |
28885 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold39573 |
29191 |
30298 |
+ |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold39573 |
30326 |
30381 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold39573 |
30395 |
30442 |
+ |
RS786 |
Unspecified |
| scaffold39573 |
30657 |
31043 |
+ |
PL844 |
Unspecified |
| scaffold39573 |
33982 |
34015 |
+ |
(GTTCT)n |
Simple_repeat |
| scaffold39573 |
35305 |
35584 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold39573 |
35682 |
35919 |
- |
RS4416 |
Unspecified |
| scaffold39573 |
36145 |
36510 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold39573 |
37216 |
37317 |
- |
Gypsy-18_SB-I |
LTR/Gypsy |
| scaffold39573 |
39704 |
39825 |
- |
COPI1_LTR |
LTR/Copia |
| scaffold39573 |
40629 |
40651 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
41919 |
42039 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
43888 |
43908 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
45448 |
45478 |
+ |
(T)n |
Simple_repeat |
| scaffold39573 |
45909 |
45985 |
+ |
(ACA)n |
Simple_repeat |
| scaffold39573 |
46121 |
47152 |
+ |
L1-14_Mad |
LINE/L1 |
| scaffold39573 |
48542 |
48563 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
49552 |
49778 |
- |
RS7182 |
Unspecified |
| scaffold39573 |
49683 |
49811 |
- |
RS11424 |
Unspecified |
| scaffold39573 |
49957 |
50094 |
- |
RS5545 |
Unspecified |
| scaffold39573 |
50594 |
50649 |
+ |
COP_I_MT-int |
LTR/Copia |
| scaffold39573 |
50709 |
50848 |
- |
RS7182 |
Unspecified |
| scaffold39573 |
51181 |
51236 |
+ |
(A)n |
Simple_repeat |
| scaffold39573 |
51361 |
51402 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold39573 |
51777 |
51827 |
+ |
(A)n |
Simple_repeat |