scaffold400 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold400 |
555 |
943 |
- |
RS2275 |
Unspecified |
| scaffold400 |
958 |
980 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold400 |
1101 |
1290 |
+ |
(TTATTAC)n |
Simple_repeat |
| scaffold400 |
1101 |
1184 |
+ |
(TTATTAC)n |
Simple_repeat |
| scaffold400 |
1145 |
1290 |
- |
RS2190 |
Unspecified |
| scaffold400 |
1807 |
1952 |
+ |
RS2170 |
Unspecified |
| scaffold400 |
1953 |
2355 |
+ |
RS11316 |
Unspecified |
| scaffold400 |
2409 |
2684 |
+ |
RS11316 |
Unspecified |
| scaffold400 |
3024 |
3309 |
- |
RS588 |
Unspecified |
| scaffold400 |
3310 |
3437 |
+ |
RS237 |
Unspecified |
| scaffold400 |
3479 |
3575 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold400 |
3819 |
3908 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold400 |
3964 |
4022 |
+ |
RS237 |
Unspecified |
| scaffold400 |
4119 |
4141 |
+ |
(A)n |
Simple_repeat |
| scaffold400 |
4353 |
4397 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold400 |
5197 |
5256 |
- |
DNA9-19_Mad |
DNA/MULE-MuDR |
| scaffold400 |
5861 |
6705 |
- |
PL706 |
Unspecified |
| scaffold400 |
6993 |
7014 |
+ |
(A)n |
Simple_repeat |
| scaffold400 |
7834 |
7891 |
+ |
(T)n |
Simple_repeat |
| scaffold400 |
8297 |
8385 |
+ |
(GAT)n |
Simple_repeat |
| scaffold400 |
8747 |
8838 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold400 |
9269 |
9296 |
- |
MuDR-15_GMa |
DNA/MULE-MuDR |
| scaffold400 |
10625 |
10641 |
+ |
(A)n |
Simple_repeat |
| scaffold400 |
11201 |
11278 |
+ |
(AATGTTT)n |
Simple_repeat |
| scaffold400 |
11575 |
12204 |
+ |
RS555 |
Unspecified |
| scaffold400 |
11689 |
12330 |
+ |
RS2588 |
Unspecified |
| scaffold400 |
12476 |
12500 |
+ |
(TTG)n |
Simple_repeat |
| scaffold400 |
12543 |
12572 |
+ |
(A)n |
Simple_repeat |
| scaffold400 |
12895 |
13507 |
- |
RS1571 |
Unspecified |
| scaffold400 |
13755 |
13832 |
+ |
A-rich |
Low_complexity |
| scaffold400 |
14499 |
15665 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold400 |
15794 |
16250 |
+ |
PL867 |
Unspecified |
| scaffold400 |
17689 |
17713 |
+ |
(T)n |
Simple_repeat |
| scaffold400 |
17799 |
17858 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold400 |
18270 |
18293 |
+ |
(T)n |
Simple_repeat |
| scaffold400 |
18381 |
18467 |
+ |
RS237 |
Unspecified |
| scaffold400 |
18509 |
18599 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold400 |
18557 |
18609 |
+ |
LT1_EPa |
LTR? |
| scaffold400 |
18643 |
18808 |
- |
PL560 |
Unspecified |
| scaffold400 |
18809 |
18853 |
+ |
RS237 |
Unspecified |
| scaffold400 |
18827 |
18889 |
+ |
RS237 |
Unspecified |
| scaffold400 |
19026 |
19086 |
+ |
(ACACTCA)n |
Simple_repeat |
| scaffold400 |
19095 |
19116 |
+ |
(A)n |
Simple_repeat |
| scaffold400 |
19117 |
19130 |
+ |
A-rich |
Low_complexity |
| scaffold400 |
19127 |
19192 |
+ |
(ACC)n |
Simple_repeat |
| scaffold400 |
19230 |
19285 |
+ |
(ATCCTC)n |
Simple_repeat |
| scaffold400 |
19270 |
19358 |
+ |
(CCA)n |
Simple_repeat |
| scaffold400 |
19697 |
19743 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold400 |
24112 |
24140 |
- |
Vandal14 |
DNA/MULE-MuDR |
| scaffold400 |
27714 |
27755 |
+ |
(T)n |
Simple_repeat |
| scaffold400 |
28082 |
28117 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold400 |
31972 |
32022 |
+ |
(ATG)n |
Simple_repeat |
| scaffold400 |
32151 |
32176 |
+ |
(GAA)n |
Simple_repeat |
| scaffold400 |
32368 |
32531 |
- |
RS2719 |
Unspecified |
| scaffold400 |
32375 |
32550 |
+ |
RS233 |
Unspecified |
| scaffold400 |
32990 |
33161 |
+ |
RS5762 |
Unspecified |
| scaffold400 |
33349 |
33411 |
+ |
(CCA)n |
Simple_repeat |
| scaffold400 |
33526 |
33576 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold400 |
33595 |
33664 |
+ |
RS5762 |
Unspecified |
| scaffold400 |
33843 |
33902 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold400 |
36209 |
36248 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold400 |
36464 |
36532 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold400 |
36840 |
36879 |
+ |
A-rich |
Low_complexity |
| scaffold400 |
38007 |
38129 |
- |
RS14309 |
Unspecified |
| scaffold400 |
38153 |
38325 |
- |
PL114 |
Unspecified |
| scaffold400 |
38340 |
38390 |
+ |
A-rich |
Low_complexity |
| scaffold400 |
38423 |
38473 |
+ |
(AGAAGCA)n |
Simple_repeat |
| scaffold400 |
39555 |
39773 |
- |
RS376 |
Unspecified |
| scaffold400 |
39786 |
39838 |
+ |
(AGTATTA)n |
Simple_repeat |
| scaffold400 |
39817 |
39879 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold400 |
40429 |
40488 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold400 |
41355 |
41381 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold400 |
41386 |
41775 |
+ |
RS4554 |
Unspecified |
| scaffold400 |
41586 |
41863 |
- |
RS2168 |
Unspecified |
| scaffold400 |
41876 |
41928 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold400 |
41957 |
41979 |
+ |
(AATT)n |
Simple_repeat |
| scaffold400 |
155294 |
155356 |
- |
PIGY-I_PS |
LTR/Gypsy |