scaffold4010 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4010 |
2 |
861 |
+ |
PL526 |
Unspecified |
| scaffold4010 |
2 |
1004 |
- |
RS494 |
Unspecified |
| scaffold4010 |
1380 |
1441 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold4010 |
1902 |
1949 |
+ |
Gypsy-39_PT-I |
LTR/Gypsy |
| scaffold4010 |
2212 |
2759 |
+ |
PL780 |
Unspecified |
| scaffold4010 |
2728 |
3148 |
+ |
PL780 |
Unspecified |
| scaffold4010 |
3165 |
5286 |
+ |
HELMET3 |
RC/Helitron |
| scaffold4010 |
5614 |
7031 |
+ |
HELMET3 |
RC/Helitron |
| scaffold4010 |
7050 |
7088 |
+ |
(ATATTTT)n |
Simple_repeat |
| scaffold4010 |
7311 |
7375 |
+ |
A-rich |
Low_complexity |
| scaffold4010 |
7648 |
8134 |
+ |
PL599 |
Unspecified |
| scaffold4010 |
9179 |
9369 |
+ |
PL599 |
Unspecified |
| scaffold4010 |
9224 |
9526 |
+ |
RS263 |
Unspecified |
| scaffold4010 |
9308 |
9531 |
+ |
PL599 |
Unspecified |
| scaffold4010 |
9709 |
9750 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold4010 |
10210 |
10297 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold4010 |
10317 |
10714 |
+ |
RS2939 |
Unspecified |
| scaffold4010 |
10816 |
11141 |
+ |
RS7160 |
Unspecified |
| scaffold4010 |
12008 |
13324 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold4010 |
12197 |
12641 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold4010 |
13364 |
13785 |
- |
RS1685 |
Unspecified |
| scaffold4010 |
13875 |
14067 |
+ |
(CCGGA)n |
Simple_repeat |
| scaffold4010 |
14314 |
14355 |
- |
RS7583 |
Unspecified |
| scaffold4010 |
14361 |
14435 |
- |
RS3001 |
Unspecified |
| scaffold4010 |
14434 |
14954 |
+ |
PL150 |
Unspecified |
| scaffold4010 |
16459 |
16644 |
- |
PL845 |
Unspecified |
| scaffold4010 |
16541 |
16698 |
- |
PL78 |
Unspecified |
| scaffold4010 |
16779 |
16818 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold4010 |
17700 |
18254 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
21205 |
21550 |
- |
RS1210 |
Unspecified |
| scaffold4010 |
21643 |
21787 |
+ |
Copia-86_GM-I |
LTR/Copia |
| scaffold4010 |
23335 |
23382 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold4010 |
23864 |
23908 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold4010 |
24321 |
24514 |
+ |
RS18243 |
Unspecified |
| scaffold4010 |
25312 |
25343 |
+ |
(TATCAC)n |
Simple_repeat |
| scaffold4010 |
25498 |
25558 |
+ |
(TAATTAT)n |
Simple_repeat |
| scaffold4010 |
27182 |
27423 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold4010 |
28438 |
28466 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold4010 |
28752 |
28845 |
+ |
A-rich |
Low_complexity |
| scaffold4010 |
29073 |
29141 |
+ |
A-rich |
Low_complexity |
| scaffold4010 |
29147 |
29412 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold4010 |
29224 |
29240 |
+ |
(T)n |
Simple_repeat |
| scaffold4010 |
32252 |
32579 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4010 |
32553 |
32579 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4010 |
33204 |
33393 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4010 |
33610 |
34245 |
- |
RS1207 |
Unspecified |
| scaffold4010 |
33705 |
34342 |
- |
RS661 |
Unspecified |
| scaffold4010 |
33825 |
34368 |
- |
RS1706 |
Unspecified |
| scaffold4010 |
33906 |
34451 |
- |
RS1930 |
Unspecified |
| scaffold4010 |
34565 |
35228 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4010 |
35419 |
35479 |
+ |
(GAT)n |
Simple_repeat |
| scaffold4010 |
35731 |
35766 |
+ |
(TTTCTT)n |
Simple_repeat |
| scaffold4010 |
36490 |
36554 |
+ |
GA-rich |
Low_complexity |
| scaffold4010 |
37978 |
38016 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold4010 |
39909 |
39975 |
+ |
RS884 |
Unspecified |
| scaffold4010 |
40314 |
41450 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold4010 |
42661 |
42691 |
+ |
(AATTATG)n |
Simple_repeat |
| scaffold4010 |
42999 |
43260 |
- |
RS185 |
Unspecified |
| scaffold4010 |
43450 |
43637 |
- |
RS17211 |
Unspecified |
| scaffold4010 |
43497 |
43637 |
+ |
RS41 |
Unspecified |
| scaffold4010 |
43638 |
43827 |
+ |
RS41 |
Unspecified |
| scaffold4010 |
44783 |
44845 |
+ |
(GAAGATGAC)n |
Simple_repeat |
| scaffold4010 |
45710 |
45899 |
+ |
RS152 |
Unspecified |
| scaffold4010 |
46011 |
46040 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold4010 |
46368 |
46415 |
+ |
A-rich |
Low_complexity |
| scaffold4010 |
46774 |
46812 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4010 |
47601 |
48358 |
+ |
RS1565 |
Unspecified |
| scaffold4010 |
48347 |
48635 |
+ |
RS9975 |
Unspecified |
| scaffold4010 |
49003 |
49160 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold4010 |
49500 |
49592 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
49624 |
50125 |
+ |
RS14236 |
Unspecified |
| scaffold4010 |
50200 |
50368 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
50386 |
50398 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
50399 |
50508 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4010 |
50509 |
51054 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
51297 |
52662 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
52665 |
52758 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
52763 |
53382 |
+ |
RS1210 |
Unspecified |
| scaffold4010 |
53324 |
53820 |
- |
RS4278 |
Unspecified |
| scaffold4010 |
53413 |
54029 |
+ |
PL219 |
Unspecified |
| scaffold4010 |
54051 |
54829 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4010 |
54861 |
55094 |
+ |
RS934 |
Unspecified |
| scaffold4010 |
61359 |
61743 |
+ |
RS374 |
Unspecified |
| scaffold4010 |
61395 |
61697 |
- |
RS9091 |
Unspecified |
| scaffold4010 |
61859 |
62012 |
- |
RS9912 |
Unspecified |
| scaffold4010 |
64201 |
64442 |
- |
PL522 |
Unspecified |
| scaffold4010 |
64733 |
64778 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold4010 |
65352 |
66035 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4010 |
65407 |
66020 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold4010 |
67795 |
67946 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold4010 |
68147 |
68303 |
- |
RS12527 |
Unspecified |
| scaffold4010 |
70563 |
71300 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold4010 |
72639 |
72656 |
+ |
(A)n |
Simple_repeat |
| scaffold4010 |
73259 |
73334 |
+ |
A-rich |
Low_complexity |
| scaffold4010 |
73857 |
73963 |
- |
RS884 |
Unspecified |
| scaffold4010 |
73870 |
74192 |
+ |
RS1502 |
Unspecified |