scaffold4072 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold4072 |
1 |
372 |
+ |
PL919 |
Unspecified |
scaffold4072 |
1729 |
1766 |
+ |
(TAATAG)n |
Simple_repeat |
scaffold4072 |
1748 |
1805 |
+ |
(ATTAATT)n |
Simple_repeat |
scaffold4072 |
2607 |
3110 |
+ |
LINE |
LINE(TransposonPSI) |
scaffold4072 |
4809 |
4865 |
+ |
(GTT)n |
Simple_repeat |
scaffold4072 |
5064 |
5142 |
+ |
(ATGGTG)n |
Simple_repeat |
scaffold4072 |
5856 |
5912 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
6083 |
6665 |
- |
PL510 |
Unspecified |
scaffold4072 |
7033 |
7795 |
+ |
RS2725 |
Unspecified |
scaffold4072 |
8771 |
8792 |
+ |
(GA)n |
Simple_repeat |
scaffold4072 |
8819 |
8885 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold4072 |
8856 |
8900 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold4072 |
10018 |
10183 |
+ |
RS12195 |
Unspecified |
scaffold4072 |
12014 |
12043 |
+ |
(T)n |
Simple_repeat |
scaffold4072 |
12125 |
12197 |
+ |
RS15131 |
Unspecified |
scaffold4072 |
12253 |
12436 |
+ |
RS870 |
Unspecified |
scaffold4072 |
16742 |
16903 |
- |
RS2719 |
Unspecified |
scaffold4072 |
16749 |
16922 |
+ |
RS233 |
Unspecified |
scaffold4072 |
18114 |
18144 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
18426 |
18690 |
+ |
RS311 |
Unspecified |
scaffold4072 |
18686 |
19741 |
+ |
PL571 |
Unspecified |
scaffold4072 |
21360 |
22964 |
+ |
Gypsy-36_BD-I |
LTR/Gypsy |
scaffold4072 |
23397 |
24049 |
+ |
Gypsy-36_BD-I |
LTR/Gypsy |
scaffold4072 |
24456 |
24720 |
+ |
RS4281 |
Unspecified |
scaffold4072 |
24700 |
24782 |
+ |
RS4281 |
Unspecified |
scaffold4072 |
24757 |
24837 |
+ |
RS4281 |
Unspecified |
scaffold4072 |
24814 |
24896 |
+ |
RS4281 |
Unspecified |
scaffold4072 |
24956 |
25264 |
+ |
RS5571 |
Unspecified |
scaffold4072 |
25127 |
26427 |
+ |
RS2212 |
Unspecified |
scaffold4072 |
28263 |
28732 |
+ |
PL571 |
Unspecified |
scaffold4072 |
28732 |
28843 |
+ |
RS8 |
Unspecified |
scaffold4072 |
29007 |
29033 |
+ |
(T)n |
Simple_repeat |
scaffold4072 |
29185 |
29243 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
scaffold4072 |
29262 |
29336 |
+ |
(AAT)n |
Simple_repeat |
scaffold4072 |
29337 |
31622 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
scaffold4072 |
31683 |
31803 |
- |
RS5848 |
Unspecified |
scaffold4072 |
31880 |
31915 |
+ |
(T)n |
Simple_repeat |
scaffold4072 |
32050 |
32095 |
+ |
(AAATTCCCAG)n |
Simple_repeat |
scaffold4072 |
32269 |
32944 |
+ |
Copia-10_ST-I |
LTR/Copia |
scaffold4072 |
33210 |
33605 |
+ |
Copia-10_ST-I |
LTR/Copia |
scaffold4072 |
33676 |
34582 |
+ |
Copia-27_ST-I |
LTR/Copia |
scaffold4072 |
35004 |
36535 |
+ |
Copia-27_ST-I |
LTR/Copia |
scaffold4072 |
36736 |
36856 |
- |
RS5848 |
Unspecified |
scaffold4072 |
37079 |
37209 |
- |
hAT-1_STu |
DNA/hAT-Tip100 |
scaffold4072 |
37238 |
37279 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
37910 |
39047 |
- |
RS534 |
Unspecified |
scaffold4072 |
40729 |
40963 |
+ |
RS15131 |
Unspecified |
scaffold4072 |
41056 |
41118 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
41093 |
41157 |
+ |
(AATTC)n |
Simple_repeat |
scaffold4072 |
41587 |
41680 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold4072 |
41755 |
41811 |
+ |
(TAA)n |
Simple_repeat |
scaffold4072 |
42249 |
42853 |
- |
RS1858 |
Unspecified |
scaffold4072 |
42878 |
43012 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
scaffold4072 |
43015 |
43060 |
+ |
(TTATTG)n |
Simple_repeat |
scaffold4072 |
43015 |
43409 |
+ |
(TTATTG)n |
Simple_repeat |
scaffold4072 |
43040 |
43447 |
+ |
(TAT)n |
Simple_repeat |
scaffold4072 |
43396 |
43447 |
+ |
(TAT)n |
Simple_repeat |
scaffold4072 |
43533 |
43625 |
+ |
(TTA)n |
Simple_repeat |
scaffold4072 |
43646 |
43751 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
scaffold4072 |
43950 |
44030 |
+ |
RS2499 |
Unspecified |
scaffold4072 |
44033 |
44223 |
+ |
RS1921 |
Unspecified |
scaffold4072 |
44277 |
44394 |
+ |
RS6586 |
Unspecified |
scaffold4072 |
44663 |
44734 |
+ |
(ATAAT)n |
Simple_repeat |
scaffold4072 |
44693 |
44734 |
+ |
(ATAAT)n |
Simple_repeat |
scaffold4072 |
44730 |
44834 |
+ |
RS13764 |
Unspecified |
scaffold4072 |
44835 |
44861 |
+ |
(A)n |
Simple_repeat |
scaffold4072 |
45029 |
45372 |
- |
RS3823 |
Unspecified |
scaffold4072 |
45280 |
45561 |
+ |
RS963 |
Unspecified |
scaffold4072 |
45570 |
45859 |
+ |
RS9620 |
Unspecified |
scaffold4072 |
45790 |
45875 |
- |
RS3355 |
Unspecified |
scaffold4072 |
46069 |
46201 |
+ |
RS8312 |
Unspecified |
scaffold4072 |
46158 |
46770 |
- |
RS439 |
Unspecified |
scaffold4072 |
46880 |
46899 |
+ |
(CCA)n |
Simple_repeat |
scaffold4072 |
47306 |
47358 |
+ |
(T)n |
Simple_repeat |
scaffold4072 |
51054 |
51100 |
+ |
(TCCACA)n |
Simple_repeat |
scaffold4072 |
51437 |
51451 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
51452 |
51490 |
+ |
(AATGTAA)n |
Simple_repeat |
scaffold4072 |
51491 |
51503 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
51561 |
51598 |
+ |
GA-rich |
Low_complexity |
scaffold4072 |
52778 |
52818 |
+ |
GA-rich |
Low_complexity |
scaffold4072 |
52819 |
52824 |
+ |
(GAATGAA)n |
Simple_repeat |
scaffold4072 |
53192 |
54521 |
+ |
RS77 |
Unspecified |
scaffold4072 |
56345 |
56514 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
scaffold4072 |
56611 |
56691 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold4072 |
56961 |
57798 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold4072 |
57810 |
59523 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold4072 |
59972 |
61166 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold4072 |
61190 |
61244 |
+ |
Gypsy-38_Mad-LTR |
LTR/Gypsy |
scaffold4072 |
61508 |
61541 |
+ |
(ACAT)n |
Simple_repeat |
scaffold4072 |
63749 |
64029 |
- |
RS478 |
Unspecified |
scaffold4072 |
63953 |
64820 |
+ |
RS77 |
Unspecified |
scaffold4072 |
66447 |
66490 |
+ |
(A)n |
Simple_repeat |
scaffold4072 |
68444 |
68513 |
+ |
Caulimovirus-2_GM |
LTR/Caulimovirus |
scaffold4072 |
68831 |
68857 |
+ |
(A)n |
Simple_repeat |
scaffold4072 |
70534 |
70582 |
+ |
A-rich |
Low_complexity |
scaffold4072 |
70912 |
70957 |
+ |
(ACA)n |
Simple_repeat |
scaffold4072 |
72064 |
72107 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold4072 |
72333 |
73822 |
+ |
RS3148 |
Unspecified |
scaffold4072 |
76098 |
76203 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold4072 |
77016 |
78599 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold4072 |
79393 |
80280 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
scaffold4072 |
80306 |
80444 |
+ |
Gypsy-29_VV-I |
LTR/Gypsy |
scaffold4072 |
80593 |
80693 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold4072 |
80932 |
81217 |
- |
RS6828 |
Unspecified |
scaffold4072 |
81508 |
81923 |
- |
PL910 |
Unspecified |
scaffold4072 |
82572 |
82611 |
+ |
G-rich |
Low_complexity |
scaffold4072 |
83118 |
83761 |
- |
RS122 |
Unspecified |