scaffold4087 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4087 |
2 |
268 |
- |
PL834 |
Unspecified |
| scaffold4087 |
657 |
690 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
834 |
906 |
+ |
RS17600 |
Unspecified |
| scaffold4087 |
907 |
1414 |
- |
PL678 |
Unspecified |
| scaffold4087 |
1728 |
1788 |
+ |
A-rich |
Low_complexity |
| scaffold4087 |
1919 |
1950 |
+ |
(ATTATG)n |
Simple_repeat |
| scaffold4087 |
2150 |
2350 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4087 |
2150 |
2205 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4087 |
2189 |
2350 |
+ |
PL296 |
Unspecified |
| scaffold4087 |
2293 |
2592 |
- |
RS861 |
Unspecified |
| scaffold4087 |
2350 |
2866 |
+ |
RS1100 |
Unspecified |
| scaffold4087 |
3319 |
3516 |
+ |
RS5434 |
Unspecified |
| scaffold4087 |
4561 |
4650 |
+ |
(GATCCA)n |
Simple_repeat |
| scaffold4087 |
6101 |
6135 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4087 |
6203 |
6255 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4087 |
6965 |
7014 |
+ |
A-rich |
Low_complexity |
| scaffold4087 |
7293 |
7347 |
+ |
(ATATTTAT)n |
Simple_repeat |
| scaffold4087 |
8211 |
8261 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold4087 |
8556 |
8589 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
9812 |
9863 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold4087 |
10425 |
10929 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold4087 |
11456 |
11505 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold4087 |
12614 |
13552 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold4087 |
13765 |
13977 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold4087 |
16355 |
16392 |
+ |
(AACGAAA)n |
Simple_repeat |
| scaffold4087 |
17070 |
17287 |
+ |
PL475 |
Unspecified |
| scaffold4087 |
18293 |
18353 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold4087 |
18354 |
18368 |
+ |
(TAATTTA)n |
Simple_repeat |
| scaffold4087 |
18811 |
19019 |
+ |
RS16679 |
Unspecified |
| scaffold4087 |
19686 |
20250 |
+ |
RS2712 |
Unspecified |
| scaffold4087 |
20252 |
20447 |
+ |
RS550 |
Unspecified |
| scaffold4087 |
20456 |
20650 |
+ |
RS11846 |
Unspecified |
| scaffold4087 |
21559 |
21622 |
+ |
(CGACT)n |
Simple_repeat |
| scaffold4087 |
22143 |
22225 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4087 |
23120 |
23885 |
- |
RS172 |
Unspecified |
| scaffold4087 |
23881 |
24058 |
+ |
RS3106 |
Unspecified |
| scaffold4087 |
25010 |
25115 |
+ |
RS469 |
Unspecified |
| scaffold4087 |
25269 |
25478 |
- |
RS11986 |
Unspecified |
| scaffold4087 |
25352 |
25477 |
+ |
RS2008 |
Unspecified |
| scaffold4087 |
25479 |
27146 |
- |
RS254 |
Unspecified |
| scaffold4087 |
27167 |
27211 |
- |
Copia-84_VV-I |
LTR/Copia |
| scaffold4087 |
27265 |
27445 |
- |
Copia-84_VV-LTR |
LTR/Copia |
| scaffold4087 |
27468 |
27745 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4087 |
27815 |
29954 |
- |
Copia-84_VV-I |
LTR/Copia |
| scaffold4087 |
27973 |
28020 |
+ |
(CAA)n |
Simple_repeat |
| scaffold4087 |
30042 |
31142 |
- |
Copia-84_VV-I |
LTR/Copia |
| scaffold4087 |
31127 |
31282 |
+ |
PL209 |
Unspecified |
| scaffold4087 |
32306 |
33595 |
+ |
hAT-3_PTr |
DNA/hAT-Ac |
| scaffold4087 |
33835 |
34208 |
+ |
hAT-6_STu |
DNA/hAT-Ac |
| scaffold4087 |
34793 |
35951 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold4087 |
35954 |
36409 |
+ |
RS1594 |
Unspecified |
| scaffold4087 |
36616 |
36635 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4087 |
36636 |
36665 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
36904 |
36964 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold4087 |
39884 |
40111 |
+ |
RS18 |
Unspecified |
| scaffold4087 |
40374 |
40535 |
+ |
RS18377 |
Unspecified |
| scaffold4087 |
40395 |
40535 |
+ |
RS10706 |
Unspecified |
| scaffold4087 |
40410 |
40535 |
+ |
RS895 |
Unspecified |
| scaffold4087 |
40533 |
40757 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold4087 |
41063 |
41121 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold4087 |
41946 |
41962 |
+ |
(TA)n |
Simple_repeat |
| scaffold4087 |
41995 |
42023 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold4087 |
42286 |
42320 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
42810 |
42996 |
- |
RS429 |
Unspecified |
| scaffold4087 |
43072 |
43121 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4087 |
43380 |
43545 |
- |
RS5179 |
Unspecified |
| scaffold4087 |
43553 |
43616 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4087 |
43636 |
43697 |
+ |
(TCT)n |
Simple_repeat |
| scaffold4087 |
43979 |
44186 |
- |
RS4183 |
Unspecified |
| scaffold4087 |
44222 |
44273 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
44372 |
44438 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
44513 |
44640 |
+ |
RS1599 |
Unspecified |
| scaffold4087 |
45006 |
45160 |
- |
RS1258 |
Unspecified |
| scaffold4087 |
45675 |
45703 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold4087 |
46368 |
46407 |
+ |
A-rich |
Low_complexity |
| scaffold4087 |
46785 |
47432 |
- |
PL211 |
Unspecified |
| scaffold4087 |
47430 |
47452 |
+ |
(AT)n |
Simple_repeat |
| scaffold4087 |
47453 |
47498 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4087 |
47569 |
47768 |
- |
RS1372 |
Unspecified |
| scaffold4087 |
48609 |
48808 |
- |
RS1372 |
Unspecified |
| scaffold4087 |
48879 |
48895 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
50013 |
50204 |
+ |
RS356 |
Unspecified |
| scaffold4087 |
50800 |
50835 |
+ |
(A)n |
Simple_repeat |
| scaffold4087 |
51243 |
51468 |
+ |
RS549 |
Unspecified |
| scaffold4087 |
52083 |
52124 |
+ |
(TTTTTTTA)n |
Simple_repeat |
| scaffold4087 |
52305 |
52569 |
+ |
RS26 |
Unspecified |
| scaffold4087 |
52639 |
52799 |
+ |
RS736 |
Unspecified |
| scaffold4087 |
52801 |
53039 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold4087 |
53145 |
53225 |
+ |
RS736 |
Unspecified |
| scaffold4087 |
53783 |
53808 |
+ |
(A)n |
Simple_repeat |
| scaffold4087 |
54002 |
54037 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4087 |
54175 |
54200 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
54943 |
54969 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
55414 |
55431 |
+ |
(A)n |
Simple_repeat |
| scaffold4087 |
55529 |
55555 |
+ |
(A)n |
Simple_repeat |
| scaffold4087 |
55889 |
55911 |
+ |
(T)n |
Simple_repeat |
| scaffold4087 |
57406 |
57522 |
- |
RS18363 |
Unspecified |
| scaffold4087 |
57425 |
57520 |
- |
RS3146 |
Unspecified |