scaffold4111 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4111 |
40 |
80 |
+ |
(GTA)n |
Simple_repeat |
| scaffold4111 |
333 |
581 |
+ |
RS1 |
Unspecified |
| scaffold4111 |
549 |
602 |
+ |
RS17699 |
Unspecified |
| scaffold4111 |
832 |
861 |
+ |
(T)n |
Simple_repeat |
| scaffold4111 |
934 |
1031 |
- |
RS16382 |
Unspecified |
| scaffold4111 |
1282 |
1431 |
- |
RS12866 |
Unspecified |
| scaffold4111 |
1412 |
1731 |
- |
PL9 |
Unspecified |
| scaffold4111 |
1709 |
1774 |
+ |
RS3123 |
Unspecified |
| scaffold4111 |
1797 |
1832 |
+ |
(CCCTC)n |
Simple_repeat |
| scaffold4111 |
1857 |
2033 |
- |
RS12866 |
Unspecified |
| scaffold4111 |
2005 |
2173 |
- |
RS3806 |
Unspecified |
| scaffold4111 |
2172 |
2436 |
- |
RS356 |
Unspecified |
| scaffold4111 |
2433 |
2501 |
- |
RS3806 |
Unspecified |
| scaffold4111 |
2503 |
2519 |
+ |
(A)n |
Simple_repeat |
| scaffold4111 |
3371 |
3421 |
+ |
(AGTAG)n |
Simple_repeat |
| scaffold4111 |
3436 |
3464 |
+ |
(AGTAGG)n |
Simple_repeat |
| scaffold4111 |
3700 |
3947 |
+ |
RS2217 |
Unspecified |
| scaffold4111 |
3967 |
4000 |
+ |
A-rich |
Low_complexity |
| scaffold4111 |
4324 |
4629 |
- |
RS3677 |
Unspecified |
| scaffold4111 |
5190 |
5206 |
+ |
(T)n |
Simple_repeat |
| scaffold4111 |
5314 |
5350 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4111 |
5480 |
6411 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold4111 |
6599 |
6699 |
+ |
VLINE2_VV |
LINE/L1 |
| scaffold4111 |
7546 |
7600 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4111 |
8075 |
8129 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4111 |
8130 |
8279 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4111 |
9330 |
9573 |
- |
RS4 |
Unspecified |
| scaffold4111 |
10711 |
10795 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold4111 |
11347 |
11478 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold4111 |
12391 |
12421 |
+ |
(T)n |
Simple_repeat |
| scaffold4111 |
12758 |
12819 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold4111 |
12815 |
13647 |
+ |
RS347 |
Unspecified |
| scaffold4111 |
14502 |
14543 |
+ |
(T)n |
Simple_repeat |
| scaffold4111 |
15034 |
15061 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold4111 |
15376 |
15456 |
+ |
(TATCT)n |
Simple_repeat |
| scaffold4111 |
15437 |
15460 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4111 |
16668 |
17133 |
+ |
PL582 |
Unspecified |
| scaffold4111 |
19466 |
19482 |
+ |
(T)n |
Simple_repeat |
| scaffold4111 |
20094 |
20153 |
+ |
Helitron-2_SMo |
RC/Helitron |
| scaffold4111 |
20323 |
20604 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold4111 |
20428 |
20602 |
- |
Gypsy-9_TA-I |
LTR/Gypsy |
| scaffold4111 |
21070 |
21171 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold4111 |
21624 |
21664 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold4111 |
21905 |
21964 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4111 |
22871 |
22931 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold4111 |
24289 |
24540 |
- |
RS581 |
Unspecified |
| scaffold4111 |
28557 |
28640 |
- |
L1-14_GM |
LINE/L1 |