scaffold4229 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4229 |
470 |
509 |
+ |
(AAG)n |
Simple_repeat |
| scaffold4229 |
697 |
785 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4229 |
788 |
986 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4229 |
1604 |
1683 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4229 |
1696 |
1984 |
- |
RS810 |
Unspecified |
| scaffold4229 |
3410 |
3678 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4229 |
3758 |
4065 |
+ |
RS2931 |
Unspecified |
| scaffold4229 |
5370 |
5395 |
+ |
(TA)n |
Simple_repeat |
| scaffold4229 |
7296 |
7391 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
7495 |
7524 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold4229 |
7681 |
7713 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold4229 |
7876 |
7943 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4229 |
8031 |
8060 |
+ |
(TA)n |
Simple_repeat |
| scaffold4229 |
8146 |
8172 |
+ |
(T)n |
Simple_repeat |
| scaffold4229 |
8555 |
8596 |
+ |
(TA)n |
Simple_repeat |
| scaffold4229 |
8555 |
8705 |
+ |
(TA)n |
Simple_repeat |
| scaffold4229 |
8589 |
8705 |
+ |
RS5460 |
Unspecified |
| scaffold4229 |
8704 |
8916 |
- |
RS810 |
Unspecified |
| scaffold4229 |
10144 |
10180 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
10476 |
10746 |
- |
RS1 |
Unspecified |
| scaffold4229 |
11434 |
11985 |
- |
PL398 |
Unspecified |
| scaffold4229 |
11987 |
12391 |
- |
RS458 |
Unspecified |
| scaffold4229 |
12903 |
13058 |
- |
RS4164 |
Unspecified |
| scaffold4229 |
13195 |
13221 |
+ |
(T)n |
Simple_repeat |
| scaffold4229 |
13418 |
13552 |
+ |
RS1632 |
Unspecified |
| scaffold4229 |
13541 |
13754 |
+ |
RS1632 |
Unspecified |
| scaffold4229 |
13917 |
14193 |
+ |
RS167 |
Unspecified |
| scaffold4229 |
14766 |
14799 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
15774 |
15846 |
+ |
G-rich |
Low_complexity |
| scaffold4229 |
15989 |
16411 |
- |
RS2626 |
Unspecified |
| scaffold4229 |
16812 |
16833 |
+ |
(TTC)n |
Simple_repeat |
| scaffold4229 |
18816 |
18831 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold4229 |
18832 |
18863 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4229 |
20580 |
20700 |
+ |
RS43 |
Unspecified |
| scaffold4229 |
20997 |
21266 |
+ |
RS356 |
Unspecified |
| scaffold4229 |
22478 |
22645 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold4229 |
23565 |
23594 |
+ |
(A)n |
Simple_repeat |
| scaffold4229 |
23669 |
23802 |
- |
RS4200 |
Unspecified |
| scaffold4229 |
23838 |
25473 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold4229 |
24994 |
25169 |
- |
PL255 |
Unspecified |
| scaffold4229 |
25807 |
26282 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold4229 |
27120 |
28268 |
- |
hAT-3_GM |
DNA/hAT-Ac |
| scaffold4229 |
28659 |
28694 |
+ |
(A)n |
Simple_repeat |
| scaffold4229 |
29463 |
29519 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold4229 |
29648 |
29703 |
+ |
(GAGTT)n |
Simple_repeat |
| scaffold4229 |
29945 |
29974 |
+ |
(AATATC)n |
Simple_repeat |
| scaffold4229 |
30586 |
31368 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4229 |
30636 |
30942 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold4229 |
31455 |
31644 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold4229 |
32054 |
32084 |
+ |
(GAA)n |
Simple_repeat |
| scaffold4229 |
32123 |
32171 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold4229 |
34877 |
34947 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
35210 |
35280 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold4229 |
36116 |
36336 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold4229 |
36335 |
36527 |
+ |
RS5318 |
Unspecified |
| scaffold4229 |
36740 |
37357 |
- |
RS830 |
Unspecified |
| scaffold4229 |
37423 |
38046 |
+ |
PL219 |
Unspecified |
| scaffold4229 |
38062 |
38117 |
+ |
(GTAGAA)n |
Simple_repeat |
| scaffold4229 |
38432 |
38527 |
- |
RS261 |
Unspecified |
| scaffold4229 |
38582 |
38677 |
- |
RS261 |
Unspecified |
| scaffold4229 |
39115 |
39168 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
39510 |
39533 |
+ |
(G)n |
Simple_repeat |
| scaffold4229 |
39772 |
42067 |
- |
RS387 |
Unspecified |
| scaffold4229 |
43889 |
44039 |
- |
RS1627 |
Unspecified |
| scaffold4229 |
45358 |
45399 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold4229 |
45639 |
45680 |
+ |
(T)n |
Simple_repeat |
| scaffold4229 |
46227 |
46389 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4229 |
46769 |
46802 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
47281 |
47774 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4229 |
47767 |
47968 |
- |
RS6781 |
Unspecified |
| scaffold4229 |
48838 |
49010 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4229 |
49148 |
49730 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold4229 |
49660 |
49730 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold4229 |
50465 |
50510 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
50593 |
50635 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold4229 |
50967 |
51357 |
- |
PL495 |
Unspecified |
| scaffold4229 |
51898 |
52708 |
- |
PL921 |
Unspecified |
| scaffold4229 |
52747 |
54244 |
+ |
PL888 |
Unspecified |
| scaffold4229 |
54308 |
55341 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold4229 |
55797 |
56937 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold4229 |
56963 |
57120 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold4229 |
57145 |
58823 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold4229 |
59008 |
59022 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold4229 |
59023 |
59067 |
+ |
(TTGTTTG)n |
Simple_repeat |
| scaffold4229 |
59955 |
60064 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold4229 |
60717 |
60755 |
+ |
(CTT)n |
Simple_repeat |
| scaffold4229 |
62150 |
62337 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4229 |
62947 |
62986 |
+ |
(CGCCT)n |
Simple_repeat |
| scaffold4229 |
63928 |
63990 |
+ |
EnSpm-3_TA |
DNA/CMC-EnSpm |
| scaffold4229 |
65059 |
65130 |
+ |
A-rich |
Low_complexity |
| scaffold4229 |
66016 |
66512 |
- |
PL271 |
Unspecified |
| scaffold4229 |
70153 |
70191 |
+ |
(GAAGAAT)n |
Simple_repeat |
| scaffold4229 |
70478 |
70823 |
+ |
PL632 |
Unspecified |
| scaffold4229 |
70809 |
70926 |
+ |
PL124 |
Unspecified |
| scaffold4229 |
70824 |
70926 |
- |
RS254 |
Unspecified |
| scaffold4229 |
72775 |
72848 |
+ |
(GTGCTT)n |
Simple_repeat |
| scaffold4229 |
72902 |
72933 |
+ |
(TGTAGG)n |
Simple_repeat |
| scaffold4229 |
72931 |
73753 |
- |
RS3815 |
Unspecified |
| scaffold4229 |
73052 |
73753 |
- |
RS254 |
Unspecified |
| scaffold4229 |
77061 |
77138 |
+ |
(TTGTTT)n |
Simple_repeat |