scaffold4297 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4297 |
2303 |
2349 |
+ |
PL207 |
Unspecified |
| scaffold4297 |
2303 |
2356 |
+ |
RS4362 |
Unspecified |
| scaffold4297 |
2375 |
2414 |
+ |
RS5556 |
Unspecified |
| scaffold4297 |
2385 |
2414 |
+ |
RS4362 |
Unspecified |
| scaffold4297 |
2442 |
2522 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4297 |
2535 |
2633 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4297 |
2676 |
2737 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4297 |
2775 |
2804 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4297 |
3754 |
3796 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold4297 |
4644 |
4904 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
5135 |
5178 |
- |
RS15742 |
Unspecified |
| scaffold4297 |
5662 |
5685 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
5746 |
5809 |
+ |
(ATTTTGG)n |
Simple_repeat |
| scaffold4297 |
7237 |
7371 |
+ |
RS620 |
Unspecified |
| scaffold4297 |
11103 |
11136 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold4297 |
11234 |
11579 |
- |
RS8 |
Unspecified |
| scaffold4297 |
12455 |
12473 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
14163 |
14190 |
+ |
(TC)n |
Simple_repeat |
| scaffold4297 |
14191 |
14237 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
15328 |
15600 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
15831 |
15874 |
- |
RS15742 |
Unspecified |
| scaffold4297 |
17309 |
17374 |
+ |
(TTTGCT)n |
Simple_repeat |
| scaffold4297 |
19294 |
19329 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
19699 |
19754 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
21913 |
22058 |
+ |
RS38 |
Unspecified |
| scaffold4297 |
22522 |
22702 |
- |
RS4361 |
Unspecified |
| scaffold4297 |
23459 |
23498 |
+ |
(TTTCTTC)n |
Simple_repeat |
| scaffold4297 |
24551 |
24823 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
25481 |
25516 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
27069 |
27236 |
+ |
RS3972 |
Unspecified |
| scaffold4297 |
28104 |
28141 |
+ |
(CT)n |
Simple_repeat |
| scaffold4297 |
28724 |
28999 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
30445 |
30574 |
+ |
RS3972 |
Unspecified |
| scaffold4297 |
31152 |
31189 |
+ |
(GTCTCTC)n |
Simple_repeat |
| scaffold4297 |
31790 |
31863 |
+ |
ATLINE1_1 |
LINE/L1 |
| scaffold4297 |
32679 |
32719 |
+ |
(TTGATTT)n |
Simple_repeat |
| scaffold4297 |
33978 |
34127 |
+ |
RS3972 |
Unspecified |
| scaffold4297 |
35027 |
35161 |
+ |
RS12902 |
Unspecified |
| scaffold4297 |
35485 |
35710 |
+ |
RS10789 |
Unspecified |
| scaffold4297 |
36124 |
36396 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
38796 |
39050 |
+ |
RS10789 |
Unspecified |
| scaffold4297 |
39471 |
39743 |
+ |
RS2779 |
Unspecified |
| scaffold4297 |
42547 |
42714 |
+ |
RS3972 |
Unspecified |
| scaffold4297 |
44001 |
44023 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
45069 |
45108 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold4297 |
47506 |
47544 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4297 |
47506 |
47650 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4297 |
47533 |
47650 |
- |
PL53 |
Unspecified |
| scaffold4297 |
47546 |
47650 |
+ |
PL536 |
Unspecified |
| scaffold4297 |
47771 |
47892 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold4297 |
49452 |
49522 |
- |
RS18078 |
Unspecified |
| scaffold4297 |
50101 |
50137 |
+ |
A-rich |
Low_complexity |
| scaffold4297 |
51124 |
51235 |
+ |
RS11837 |
Unspecified |
| scaffold4297 |
51332 |
51349 |
+ |
(A)n |
Simple_repeat |
| scaffold4297 |
51737 |
51785 |
+ |
(AATCAT)n |
Simple_repeat |
| scaffold4297 |
52595 |
52676 |
- |
RS12244 |
Unspecified |
| scaffold4297 |
53002 |
53275 |
+ |
RS109 |
Unspecified |
| scaffold4297 |
54062 |
54143 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold4297 |
54475 |
54501 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold4297 |
54505 |
54982 |
+ |
(TT)n |
Simple_repeat |
| scaffold4297 |
54943 |
54982 |
+ |
(TT)n |
Simple_repeat |
| scaffold4297 |
54980 |
55265 |
- |
PL438 |
Unspecified |
| scaffold4297 |
56270 |
56329 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold4297 |
56737 |
56974 |
- |
RS446 |
Unspecified |
| scaffold4297 |
58120 |
58265 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
58120 |
58161 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
58146 |
58265 |
- |
RS17927 |
Unspecified |
| scaffold4297 |
58530 |
58559 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
58861 |
58907 |
+ |
(ATTATTT)n |
Simple_repeat |
| scaffold4297 |
58939 |
58974 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
59651 |
59686 |
+ |
RS5952 |
Unspecified |
| scaffold4297 |
59717 |
59911 |
+ |
RS5952 |
Unspecified |
| scaffold4297 |
60096 |
60117 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4297 |
61292 |
61557 |
- |
RS356 |
Unspecified |
| scaffold4297 |
61573 |
61637 |
- |
RS18072 |
Unspecified |
| scaffold4297 |
61804 |
61820 |
+ |
(A)n |
Simple_repeat |
| scaffold4297 |
62133 |
62159 |
+ |
(TTC)n |
Simple_repeat |
| scaffold4297 |
62177 |
62250 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4297 |
62251 |
62258 |
+ |
(TGATAA)n |
Simple_repeat |
| scaffold4297 |
62358 |
62400 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
66712 |
66809 |
- |
RS38 |
Unspecified |
| scaffold4297 |
67772 |
67800 |
+ |
G-rich |
Low_complexity |
| scaffold4297 |
72891 |
72937 |
+ |
A-rich |
Low_complexity |
| scaffold4297 |
74615 |
74652 |
+ |
A-rich |
Low_complexity |
| scaffold4297 |
74755 |
74824 |
+ |
A-rich |
Low_complexity |
| scaffold4297 |
74795 |
74826 |
+ |
(GAAAT)n |
Simple_repeat |
| scaffold4297 |
74841 |
74889 |
+ |
(ACAGT)n |
Simple_repeat |
| scaffold4297 |
74904 |
74939 |
+ |
(T)n |
Simple_repeat |
| scaffold4297 |
75207 |
75237 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4297 |
75519 |
75573 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold4297 |
75893 |
75961 |
+ |
(GTG)n |
Simple_repeat |
| scaffold4297 |
76028 |
76083 |
+ |
(AGCTCG)n |
Simple_repeat |
| scaffold4297 |
76335 |
76377 |
- |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold4297 |
76378 |
76507 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold4297 |
76518 |
76593 |
+ |
(GTG)n |
Simple_repeat |