scaffold4336 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4336 |
6 |
834 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold4336 |
1091 |
2955 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold4336 |
3082 |
3644 |
+ |
RS1275 |
Unspecified |
| scaffold4336 |
3480 |
3687 |
- |
RS8043 |
Unspecified |
| scaffold4336 |
3993 |
4087 |
- |
RS91 |
Unspecified |
| scaffold4336 |
4004 |
4087 |
+ |
RS1275 |
Unspecified |
| scaffold4336 |
4220 |
4236 |
+ |
(T)n |
Simple_repeat |
| scaffold4336 |
4812 |
4850 |
+ |
(GTTTGG)n |
Simple_repeat |
| scaffold4336 |
4898 |
4937 |
+ |
GA-rich |
Low_complexity |
| scaffold4336 |
5404 |
5430 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4336 |
6802 |
6837 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold4336 |
7151 |
7393 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
7571 |
7786 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
8039 |
8063 |
+ |
(T)n |
Simple_repeat |
| scaffold4336 |
8097 |
8190 |
+ |
RS4475 |
Unspecified |
| scaffold4336 |
13328 |
13356 |
+ |
GA-rich |
Low_complexity |
| scaffold4336 |
13554 |
13601 |
+ |
G-rich |
Low_complexity |
| scaffold4336 |
14009 |
14044 |
+ |
(TCAGG)n |
Simple_repeat |
| scaffold4336 |
14169 |
14210 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
15451 |
15491 |
+ |
RS1496 |
Unspecified |
| scaffold4336 |
16621 |
16910 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold4336 |
17658 |
17705 |
+ |
GA-rich |
Low_complexity |
| scaffold4336 |
17706 |
17725 |
+ |
(AAGAAC)n |
Simple_repeat |
| scaffold4336 |
17726 |
17751 |
+ |
(AAGGAC)n |
Simple_repeat |
| scaffold4336 |
18366 |
18509 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold4336 |
19333 |
19409 |
+ |
(AACGAAC)n |
Simple_repeat |
| scaffold4336 |
19595 |
20016 |
+ |
RS850 |
Unspecified |
| scaffold4336 |
19970 |
20057 |
+ |
RS850 |
Unspecified |
| scaffold4336 |
20004 |
20226 |
+ |
RS1457 |
Unspecified |
| scaffold4336 |
20143 |
20987 |
+ |
RS397 |
Unspecified |
| scaffold4336 |
20271 |
20988 |
+ |
RS695 |
Unspecified |
| scaffold4336 |
21029 |
21874 |
+ |
Ogre-PT2_I-int |
LTR/Gypsy |
| scaffold4336 |
21873 |
22539 |
+ |
PL747 |
Unspecified |
| scaffold4336 |
24971 |
25691 |
+ |
RS695 |
Unspecified |
| scaffold4336 |
26466 |
26664 |
+ |
(CCA)n |
Simple_repeat |
| scaffold4336 |
26680 |
26786 |
- |
RS13112 |
Unspecified |
| scaffold4336 |
27086 |
27152 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold4336 |
27525 |
27713 |
- |
HARB-1_STu |
DNA/PIF-Harbinger |
| scaffold4336 |
28027 |
28134 |
+ |
RS2291 |
Unspecified |
| scaffold4336 |
28592 |
29369 |
- |
HARB-1_OS |
DNA/PIF-Harbinger |
| scaffold4336 |
29560 |
29588 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
29676 |
29721 |
+ |
(ACT)n |
Simple_repeat |
| scaffold4336 |
29876 |
30012 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4336 |
31402 |
31603 |
+ |
RS5468 |
Unspecified |
| scaffold4336 |
31664 |
31790 |
- |
RS11170 |
Unspecified |
| scaffold4336 |
31925 |
32094 |
+ |
RS13582 |
Unspecified |
| scaffold4336 |
32218 |
32331 |
- |
RS3682 |
Unspecified |
| scaffold4336 |
32921 |
33127 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
33274 |
33462 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
33750 |
33849 |
- |
RS16960 |
Unspecified |
| scaffold4336 |
33853 |
33987 |
- |
RS16018 |
Unspecified |
| scaffold4336 |
34164 |
34280 |
- |
RS16279 |
Unspecified |
| scaffold4336 |
34284 |
34392 |
- |
RS15128 |
Unspecified |
| scaffold4336 |
34622 |
34667 |
+ |
(AGAACCA)n |
Simple_repeat |
| scaffold4336 |
35658 |
35782 |
+ |
RS1298 |
Unspecified |
| scaffold4336 |
36081 |
36288 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
36404 |
36507 |
+ |
(T)n |
Simple_repeat |
| scaffold4336 |
36524 |
36805 |
- |
RS1779 |
Unspecified |
| scaffold4336 |
36913 |
37125 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4336 |
37255 |
37293 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
37354 |
37397 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
42015 |
42046 |
+ |
Gret1_I-int |
LTR/Gypsy |
| scaffold4336 |
44692 |
44821 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold4336 |
44939 |
44977 |
+ |
(CACCGC)n |
Simple_repeat |
| scaffold4336 |
45126 |
45165 |
+ |
(ATGATTA)n |
Simple_repeat |
| scaffold4336 |
45163 |
45181 |
+ |
(A)n |
Simple_repeat |
| scaffold4336 |
45306 |
45329 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4336 |
45362 |
45385 |
+ |
(A)n |
Simple_repeat |
| scaffold4336 |
45607 |
45670 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold4336 |
45706 |
45952 |
+ |
RS4 |
Unspecified |
| scaffold4336 |
46540 |
46608 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold4336 |
46751 |
46796 |
+ |
(A)n |
Simple_repeat |
| scaffold4336 |
47045 |
47068 |
+ |
(T)n |
Simple_repeat |
| scaffold4336 |
47131 |
47190 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold4336 |
48951 |
49117 |
+ |
RS16030 |
Unspecified |
| scaffold4336 |
49383 |
49575 |
+ |
RS16772 |
Unspecified |
| scaffold4336 |
54616 |
54676 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4336 |
54785 |
54894 |
- |
PL517 |
Unspecified |
| scaffold4336 |
55712 |
55754 |
+ |
(ATTTTAAT)n |
Simple_repeat |
| scaffold4336 |
55911 |
55981 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold4336 |
57025 |
57066 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold4336 |
57470 |
57513 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
57585 |
57615 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold4336 |
58356 |
58466 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4336 |
58899 |
58938 |
+ |
(CGGGT)n |
Simple_repeat |
| scaffold4336 |
59112 |
59448 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4336 |
59513 |
59594 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4336 |
59595 |
59606 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold4336 |
59882 |
59936 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4336 |
61218 |
61598 |
- |
RS614 |
Unspecified |
| scaffold4336 |
62024 |
62065 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
62666 |
62723 |
+ |
(AGTATGT)n |
Simple_repeat |
| scaffold4336 |
71489 |
71506 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4336 |
72212 |
72232 |
+ |
(T)n |
Simple_repeat |
| scaffold4336 |
72344 |
72375 |
+ |
(ATTAC)n |
Simple_repeat |
| scaffold4336 |
72497 |
72532 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold4336 |
72535 |
72787 |
+ |
RS356 |
Unspecified |
| scaffold4336 |
72845 |
73080 |
+ |
RS4 |
Unspecified |
| scaffold4336 |
73087 |
73506 |
- |
PL3 |
Unspecified |
| scaffold4336 |
73782 |
74033 |
+ |
RS581 |
Unspecified |
| scaffold4336 |
74500 |
74710 |
+ |
RS1272 |
Unspecified |
| scaffold4336 |
74730 |
74818 |
+ |
RS1272 |
Unspecified |
| scaffold4336 |
74877 |
74918 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold4336 |
74966 |
75018 |
+ |
(ATGTA)n |
Simple_repeat |
| scaffold4336 |
75111 |
75180 |
+ |
A-rich |
Low_complexity |
| scaffold4336 |
75236 |
75273 |
+ |
(AATGGAG)n |
Simple_repeat |
| scaffold4336 |
78364 |
78385 |
+ |
(A)n |
Simple_repeat |