scaffold439 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold439 |
582 |
622 |
+ |
(TATAAT)n |
Simple_repeat |
scaffold439 |
657 |
715 |
+ |
PL296 |
Unspecified |
scaffold439 |
813 |
968 |
+ |
A-rich |
Low_complexity |
scaffold439 |
1051 |
1083 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
1484 |
1625 |
- |
RS5579 |
Unspecified |
scaffold439 |
1643 |
2064 |
+ |
RS2556 |
Unspecified |
scaffold439 |
1950 |
2258 |
- |
RS3645 |
Unspecified |
scaffold439 |
3067 |
3328 |
- |
RS3507 |
Unspecified |
scaffold439 |
3334 |
3575 |
- |
RS4477 |
Unspecified |
scaffold439 |
3456 |
3631 |
- |
RS4124 |
Unspecified |
scaffold439 |
4784 |
4807 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
4928 |
5019 |
- |
RS966 |
Unspecified |
scaffold439 |
4992 |
5126 |
- |
RS924 |
Unspecified |
scaffold439 |
5704 |
5839 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold439 |
5909 |
5959 |
+ |
(TTC)n |
Simple_repeat |
scaffold439 |
5974 |
6007 |
+ |
(TCATTA)n |
Simple_repeat |
scaffold439 |
7090 |
7122 |
+ |
COP3_I_MT-int |
LTR/Copia |
scaffold439 |
8488 |
8579 |
- |
RS3818 |
Unspecified |
scaffold439 |
8611 |
9013 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold439 |
9415 |
9531 |
+ |
(AT)n |
Simple_repeat |
scaffold439 |
9415 |
9445 |
+ |
(AT)n |
Simple_repeat |
scaffold439 |
9431 |
9531 |
- |
RS4315 |
Unspecified |
scaffold439 |
9672 |
9848 |
- |
RS2414 |
Unspecified |
scaffold439 |
10678 |
10706 |
+ |
(T)n |
Simple_repeat |
scaffold439 |
11230 |
11396 |
+ |
RS13351 |
Unspecified |
scaffold439 |
11457 |
11531 |
- |
RS1864 |
Unspecified |
scaffold439 |
15289 |
15462 |
- |
RS13354 |
Unspecified |
scaffold439 |
15960 |
15977 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
16033 |
16091 |
+ |
RS38 |
Unspecified |
scaffold439 |
16121 |
16215 |
- |
PL754 |
Unspecified |
scaffold439 |
16771 |
16816 |
+ |
A-rich |
Low_complexity |
scaffold439 |
17146 |
17167 |
+ |
(ATA)n |
Simple_repeat |
scaffold439 |
17592 |
17618 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
17759 |
18003 |
+ |
RS518 |
Unspecified |
scaffold439 |
18658 |
18681 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
18880 |
19001 |
+ |
PL754 |
Unspecified |
scaffold439 |
18902 |
18995 |
+ |
RS16382 |
Unspecified |
scaffold439 |
19402 |
19454 |
+ |
A-rich |
Low_complexity |
scaffold439 |
19647 |
19892 |
- |
RS10781 |
Unspecified |
scaffold439 |
19898 |
19934 |
- |
RS6280 |
Unspecified |
scaffold439 |
20131 |
20233 |
- |
RS7616 |
Unspecified |
scaffold439 |
20420 |
20592 |
- |
RS7762 |
Unspecified |
scaffold439 |
20622 |
20989 |
- |
RS10430 |
Unspecified |
scaffold439 |
21025 |
21343 |
+ |
RS5796 |
Unspecified |
scaffold439 |
21399 |
21642 |
- |
RS9971 |
Unspecified |
scaffold439 |
21664 |
21782 |
- |
RS7805 |
Unspecified |
scaffold439 |
21941 |
21961 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
21968 |
22222 |
+ |
RS3048 |
Unspecified |
scaffold439 |
22203 |
22313 |
+ |
RS5544 |
Unspecified |
scaffold439 |
22600 |
22641 |
- |
EnSpm-1_HV |
DNA/CMC-EnSpm |
scaffold439 |
22884 |
22992 |
- |
RS4633 |
Unspecified |
scaffold439 |
23207 |
23240 |
+ |
(TAGGAT)n |
Simple_repeat |
scaffold439 |
23508 |
23615 |
- |
PL101 |
Unspecified |
scaffold439 |
23631 |
23749 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold439 |
24072 |
24346 |
+ |
RS11001 |
Unspecified |
scaffold439 |
25043 |
25106 |
+ |
(TTATTAT)n |
Simple_repeat |
scaffold439 |
26233 |
26268 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
26252 |
26288 |
+ |
A-rich |
Low_complexity |
scaffold439 |
26532 |
26723 |
+ |
(TATTA)n |
Simple_repeat |
scaffold439 |
26927 |
27119 |
+ |
RS10397 |
Unspecified |
scaffold439 |
27121 |
27217 |
+ |
(TGG)n |
Simple_repeat |
scaffold439 |
27782 |
27935 |
+ |
RS3465 |
Unspecified |
scaffold439 |
28263 |
28302 |
+ |
A-rich |
Low_complexity |
scaffold439 |
29076 |
29170 |
+ |
A-rich |
Low_complexity |
scaffold439 |
29221 |
29366 |
- |
Helitron5 |
RC/Helitron |
scaffold439 |
29425 |
29459 |
+ |
A-rich |
Low_complexity |
scaffold439 |
29815 |
30029 |
- |
RS4 |
Unspecified |
scaffold439 |
30208 |
30349 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold439 |
30428 |
30656 |
- |
RS5028 |
Unspecified |
scaffold439 |
30672 |
30858 |
+ |
(AAT)n |
Simple_repeat |
scaffold439 |
30746 |
30858 |
+ |
(AAT)n |
Simple_repeat |
scaffold439 |
31003 |
31119 |
+ |
RS9080 |
Unspecified |
scaffold439 |
31497 |
31583 |
+ |
RS8229 |
Unspecified |
scaffold439 |
31559 |
31632 |
+ |
RS9747 |
Unspecified |
scaffold439 |
31950 |
31977 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
32244 |
32294 |
+ |
GA-rich |
Low_complexity |
scaffold439 |
32413 |
32474 |
+ |
RS9298 |
Unspecified |
scaffold439 |
32487 |
32751 |
- |
RS356 |
Unspecified |
scaffold439 |
33151 |
33762 |
+ |
RS546 |
Unspecified |
scaffold439 |
33270 |
33962 |
- |
RS325 |
Unspecified |
scaffold439 |
34144 |
34289 |
- |
PL859 |
Unspecified |
scaffold439 |
34549 |
34598 |
+ |
(T)n |
Simple_repeat |
scaffold439 |
35026 |
35074 |
+ |
(ATT)n |
Simple_repeat |
scaffold439 |
35228 |
35373 |
- |
RS1329 |
Unspecified |
scaffold439 |
35416 |
35667 |
- |
PL774 |
Unspecified |
scaffold439 |
36807 |
36842 |
+ |
A-rich |
Low_complexity |
scaffold439 |
36909 |
36981 |
+ |
RS2160 |
Unspecified |
scaffold439 |
37112 |
37138 |
+ |
(GCC)n |
Simple_repeat |
scaffold439 |
37872 |
37928 |
+ |
RS38 |
Unspecified |
scaffold439 |
37958 |
38053 |
- |
PL754 |
Unspecified |
scaffold439 |
39402 |
39428 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
39941 |
40076 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold439 |
40397 |
40421 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
40837 |
41114 |
+ |
RS17600 |
Unspecified |
scaffold439 |
41564 |
41601 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold439 |
41890 |
41940 |
+ |
A-rich |
Low_complexity |
scaffold439 |
42218 |
42254 |
+ |
(ATTAAT)n |
Simple_repeat |
scaffold439 |
42545 |
42626 |
+ |
(AACTG)n |
Simple_repeat |
scaffold439 |
46419 |
46494 |
- |
RS79 |
Unspecified |
scaffold439 |
46717 |
46737 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
50235 |
50341 |
- |
RS10094 |
Unspecified |
scaffold439 |
50666 |
50827 |
- |
RS7503 |
Unspecified |
scaffold439 |
51192 |
51315 |
- |
RS8639 |
Unspecified |
scaffold439 |
51501 |
51651 |
+ |
RS9080 |
Unspecified |
scaffold439 |
51641 |
51780 |
+ |
RS8229 |
Unspecified |
scaffold439 |
52271 |
52428 |
+ |
RS9747 |
Unspecified |
scaffold439 |
52444 |
52512 |
+ |
(ACAATATG)n |
Simple_repeat |
scaffold439 |
52512 |
52789 |
- |
RS7639 |
Unspecified |
scaffold439 |
52572 |
52854 |
+ |
RS6438 |
Unspecified |
scaffold439 |
52958 |
53116 |
+ |
RS8004 |
Unspecified |
scaffold439 |
53189 |
53225 |
+ |
A-rich |
Low_complexity |
scaffold439 |
53264 |
53503 |
- |
RS6658 |
Unspecified |
scaffold439 |
53537 |
53574 |
+ |
(AAAATTA)n |
Simple_repeat |
scaffold439 |
53715 |
53744 |
+ |
(ATTCAA)n |
Simple_repeat |
scaffold439 |
53769 |
53796 |
+ |
(AATAAC)n |
Simple_repeat |
scaffold439 |
54555 |
54576 |
+ |
(A)n |
Simple_repeat |
scaffold439 |
54919 |
54959 |
+ |
(TTGGAA)n |
Simple_repeat |
scaffold439 |
54919 |
55321 |
+ |
(TTGGAA)n |
Simple_repeat |
scaffold439 |
54941 |
55321 |
+ |
PL774 |
Unspecified |
scaffold439 |
56305 |
56840 |
+ |
RS1257 |
Unspecified |
scaffold439 |
56957 |
56991 |
+ |
(CGGAC)n |
Simple_repeat |
scaffold439 |
57405 |
57741 |
- |
RS2012 |
Unspecified |
scaffold439 |
57918 |
58099 |
+ |
RS326 |
Unspecified |
scaffold439 |
58067 |
58354 |
+ |
RS326 |
Unspecified |
scaffold439 |
58167 |
58386 |
+ |
RS10338 |
Unspecified |
scaffold439 |
59749 |
60038 |
+ |
RS326 |
Unspecified |
scaffold439 |
59850 |
60070 |
+ |
RS10338 |
Unspecified |
scaffold439 |
60398 |
60443 |
+ |
(TTATATT)n |
Simple_repeat |
scaffold439 |
60593 |
60599 |
+ |
(TTTATT)n |
Simple_repeat |
scaffold439 |
147954 |
148009 |
+ |
(A)n |
Simple_repeat |