scaffold4524 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4524 |
314 |
351 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
709 |
959 |
+ |
RS3761 |
Unspecified |
| scaffold4524 |
816 |
990 |
- |
RS3889 |
Unspecified |
| scaffold4524 |
848 |
1342 |
- |
RS1908 |
Unspecified |
| scaffold4524 |
2626 |
2736 |
+ |
RS11455 |
Unspecified |
| scaffold4524 |
2958 |
3094 |
- |
RS17298 |
Unspecified |
| scaffold4524 |
3743 |
3893 |
+ |
RS16930 |
Unspecified |
| scaffold4524 |
4136 |
4186 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4524 |
4399 |
4689 |
- |
RS631 |
Unspecified |
| scaffold4524 |
4692 |
4801 |
+ |
RS18024 |
Unspecified |
| scaffold4524 |
4805 |
4874 |
- |
RS1452 |
Unspecified |
| scaffold4524 |
4871 |
4923 |
- |
IBGypsy1_I-int |
LTR/Gypsy |
| scaffold4524 |
5109 |
5398 |
- |
RS631 |
Unspecified |
| scaffold4524 |
5401 |
5510 |
+ |
RS18024 |
Unspecified |
| scaffold4524 |
5508 |
5570 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold4524 |
5582 |
5790 |
+ |
MtPH-A5-Ia |
DNA/PIF-Harbinger |
| scaffold4524 |
5815 |
5877 |
+ |
(ATGATG)n |
Simple_repeat |
| scaffold4524 |
6858 |
6883 |
+ |
(AAGA)n |
Simple_repeat |
| scaffold4524 |
7157 |
7328 |
+ |
RS2517 |
Unspecified |
| scaffold4524 |
12308 |
12401 |
- |
RS549 |
Unspecified |
| scaffold4524 |
12425 |
12578 |
+ |
PL233 |
Unspecified |
| scaffold4524 |
12560 |
12770 |
+ |
PL233 |
Unspecified |
| scaffold4524 |
12998 |
13166 |
- |
RS18 |
Unspecified |
| scaffold4524 |
13261 |
13308 |
- |
RS146 |
Unspecified |
| scaffold4524 |
13810 |
13960 |
+ |
RS1082 |
Unspecified |
| scaffold4524 |
14085 |
14118 |
+ |
(CCAC)n |
Simple_repeat |
| scaffold4524 |
14591 |
14644 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
14791 |
15091 |
+ |
RS7727 |
Unspecified |
| scaffold4524 |
15227 |
15274 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
15276 |
15500 |
+ |
PL438 |
Unspecified |
| scaffold4524 |
15859 |
15896 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
15895 |
16147 |
- |
RS356 |
Unspecified |
| scaffold4524 |
16003 |
16166 |
- |
RS18072 |
Unspecified |
| scaffold4524 |
16705 |
16961 |
+ |
RS1 |
Unspecified |
| scaffold4524 |
17029 |
17085 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold4524 |
17832 |
17927 |
- |
RS16382 |
Unspecified |
| scaffold4524 |
18164 |
18201 |
- |
RS1 |
Unspecified |
| scaffold4524 |
18171 |
18442 |
+ |
RS1 |
Unspecified |
| scaffold4524 |
19241 |
19275 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
19551 |
19606 |
+ |
(CCT)n |
Simple_repeat |
| scaffold4524 |
20292 |
20715 |
+ |
RS343 |
Unspecified |
| scaffold4524 |
20705 |
21076 |
+ |
RS2649 |
Unspecified |
| scaffold4524 |
21078 |
21190 |
- |
RS12391 |
Unspecified |
| scaffold4524 |
21223 |
21633 |
- |
RS343 |
Unspecified |
| scaffold4524 |
21686 |
21991 |
+ |
RS1452 |
Unspecified |
| scaffold4524 |
21995 |
22216 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4524 |
22458 |
22479 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
22484 |
22808 |
- |
RS656 |
Unspecified |
| scaffold4524 |
22806 |
22906 |
+ |
RS2649 |
Unspecified |
| scaffold4524 |
22806 |
22934 |
- |
RS486 |
Unspecified |
| scaffold4524 |
23261 |
23503 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold4524 |
23490 |
23902 |
- |
RS343 |
Unspecified |
| scaffold4524 |
23955 |
24260 |
+ |
RS1452 |
Unspecified |
| scaffold4524 |
24226 |
24491 |
- |
RS1221 |
Unspecified |
| scaffold4524 |
24656 |
24756 |
- |
PL779 |
Unspecified |
| scaffold4524 |
24756 |
24986 |
- |
RS1085 |
Unspecified |
| scaffold4524 |
25393 |
25402 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold4524 |
25403 |
25455 |
+ |
(ATATGAT)n |
Simple_repeat |
| scaffold4524 |
25456 |
25462 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold4524 |
25578 |
25700 |
+ |
RS10414 |
Unspecified |
| scaffold4524 |
25715 |
25901 |
+ |
RS222 |
Unspecified |
| scaffold4524 |
25961 |
26377 |
+ |
PL3 |
Unspecified |
| scaffold4524 |
26105 |
26136 |
+ |
(AACCAA)n |
Simple_repeat |
| scaffold4524 |
28642 |
28678 |
+ |
(AAAAAC)n |
Simple_repeat |
| scaffold4524 |
31412 |
31443 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold4524 |
31535 |
31751 |
- |
RS376 |
Unspecified |
| scaffold4524 |
31773 |
31872 |
+ |
PL699 |
Unspecified |
| scaffold4524 |
32820 |
32883 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
33282 |
33440 |
+ |
(CAT)n |
Simple_repeat |
| scaffold4524 |
33838 |
33852 |
+ |
(CAGCAAC)n |
Simple_repeat |
| scaffold4524 |
33853 |
33877 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4524 |
33878 |
33889 |
+ |
(CAGCAAC)n |
Simple_repeat |
| scaffold4524 |
34049 |
34171 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold4524 |
34912 |
36251 |
- |
RAM9B_I-int |
LTR/Gypsy |
| scaffold4524 |
36477 |
36599 |
- |
DEA1 |
LTR/Gypsy |
| scaffold4524 |
36598 |
36772 |
+ |
RS6502 |
Unspecified |
| scaffold4524 |
38108 |
38374 |
- |
RS3269 |
Unspecified |
| scaffold4524 |
38242 |
38927 |
+ |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
38430 |
38927 |
+ |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
38913 |
39026 |
- |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
39027 |
39233 |
- |
RS22 |
Unspecified |
| scaffold4524 |
39235 |
39383 |
- |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
39375 |
41042 |
+ |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
41277 |
41610 |
+ |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
41804 |
41833 |
+ |
(AT)n |
Simple_repeat |
| scaffold4524 |
42042 |
43306 |
+ |
COP18_I_MT-int |
LTR/Copia |
| scaffold4524 |
43747 |
43842 |
+ |
RS10787 |
Unspecified |
| scaffold4524 |
44017 |
44074 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4524 |
44046 |
44078 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
44482 |
44588 |
+ |
(TTATTAC)n |
Simple_repeat |
| scaffold4524 |
45183 |
45443 |
+ |
RS26 |
Unspecified |
| scaffold4524 |
45472 |
45613 |
- |
RS3269 |
Unspecified |
| scaffold4524 |
45613 |
46189 |
- |
PL301 |
Unspecified |
| scaffold4524 |
46258 |
46395 |
+ |
RS3946 |
Unspecified |
| scaffold4524 |
46298 |
46458 |
+ |
RS13246 |
Unspecified |
| scaffold4524 |
47088 |
47113 |
+ |
GA-rich |
Low_complexity |
| scaffold4524 |
47114 |
47153 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
47200 |
47339 |
- |
RS13246 |
Unspecified |
| scaffold4524 |
47246 |
47386 |
- |
RS3946 |
Unspecified |
| scaffold4524 |
48061 |
48148 |
+ |
(AT)n |
Simple_repeat |
| scaffold4524 |
48482 |
48529 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
48703 |
48733 |
+ |
(CTTCAA)n |
Simple_repeat |
| scaffold4524 |
49787 |
49831 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4524 |
50780 |
50806 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
51118 |
51157 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
51226 |
51654 |
- |
PL439 |
Unspecified |
| scaffold4524 |
51655 |
52221 |
+ |
RS3121 |
Unspecified |
| scaffold4524 |
51990 |
52892 |
+ |
RS1367 |
Unspecified |
| scaffold4524 |
53453 |
53490 |
+ |
(GAA)n |
Simple_repeat |
| scaffold4524 |
53613 |
53663 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold4524 |
53666 |
53823 |
+ |
PL232 |
Unspecified |
| scaffold4524 |
53930 |
54123 |
+ |
RS586 |
Unspecified |
| scaffold4524 |
54691 |
54727 |
+ |
(TGT)n |
Simple_repeat |
| scaffold4524 |
55387 |
55421 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
55684 |
55879 |
+ |
RS163 |
Unspecified |
| scaffold4524 |
56381 |
56576 |
- |
RS132 |
Unspecified |
| scaffold4524 |
56586 |
56814 |
- |
RS4 |
Unspecified |
| scaffold4524 |
61479 |
61525 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold4524 |
63087 |
63165 |
+ |
(ATATTG)n |
Simple_repeat |
| scaffold4524 |
63705 |
64009 |
+ |
PL2 |
Unspecified |
| scaffold4524 |
64259 |
64339 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold4524 |
70299 |
70351 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
70513 |
70556 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold4524 |
70819 |
70986 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4524 |
71080 |
71127 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold4524 |
71145 |
71361 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold4524 |
71637 |
71694 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
72615 |
72701 |
- |
RS4 |
Unspecified |
| scaffold4524 |
73192 |
73249 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4524 |
73259 |
73304 |
+ |
RS499 |
Unspecified |
| scaffold4524 |
73264 |
73552 |
- |
RS499 |
Unspecified |
| scaffold4524 |
74170 |
74197 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold4524 |
76087 |
76118 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
76155 |
76192 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold4524 |
77253 |
77481 |
- |
ANGELA6_TM-int |
LTR/Copia |
| scaffold4524 |
78585 |
78616 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
78849 |
78893 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
79391 |
79459 |
+ |
(AATC)n |
Simple_repeat |
| scaffold4524 |
79841 |
79872 |
+ |
(TAGAAT)n |
Simple_repeat |
| scaffold4524 |
80060 |
80109 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold4524 |
80604 |
81950 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold4524 |
80641 |
80884 |
- |
L1-14_GM |
LINE/L1 |
| scaffold4524 |
80938 |
81570 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold4524 |
82151 |
82190 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold4524 |
82254 |
82280 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold4524 |
84210 |
84324 |
- |
L1-5_STu |
LINE/L1 |
| scaffold4524 |
85453 |
85477 |
+ |
(AGA)n |
Simple_repeat |
| scaffold4524 |
85725 |
85741 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
86522 |
87875 |
+ |
RS465 |
Unspecified |
| scaffold4524 |
89714 |
89736 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
89890 |
89953 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4524 |
89890 |
90160 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4524 |
89924 |
90160 |
+ |
PL619 |
Unspecified |
| scaffold4524 |
90727 |
91064 |
+ |
RS2219 |
Unspecified |
| scaffold4524 |
91069 |
91306 |
- |
RS98 |
Unspecified |
| scaffold4524 |
91308 |
91602 |
+ |
RS1746 |
Unspecified |
| scaffold4524 |
91376 |
91657 |
- |
RS1746 |
Unspecified |
| scaffold4524 |
91657 |
91752 |
- |
RS98 |
Unspecified |
| scaffold4524 |
91953 |
92009 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold4524 |
93965 |
93994 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
94142 |
94671 |
+ |
PL728 |
Unspecified |
| scaffold4524 |
94771 |
94812 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
96067 |
96269 |
+ |
RS163 |
Unspecified |
| scaffold4524 |
97863 |
98006 |
+ |
RS934 |
Unspecified |
| scaffold4524 |
98007 |
99752 |
+ |
RS934 |
Unspecified |
| scaffold4524 |
99249 |
101971 |
+ |
RS150 |
Unspecified |
| scaffold4524 |
101978 |
102286 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold4524 |
102889 |
102932 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
103459 |
103482 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
104493 |
104537 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4524 |
108354 |
108377 |
+ |
(CTG)n |
Simple_repeat |
| scaffold4524 |
109329 |
109406 |
+ |
(TGAGC)n |
Simple_repeat |
| scaffold4524 |
109787 |
110050 |
+ |
RS68 |
Unspecified |
| scaffold4524 |
110232 |
110258 |
+ |
(ATCCG)n |
Simple_repeat |
| scaffold4524 |
110288 |
110339 |
+ |
(ATCGG)n |
Simple_repeat |
| scaffold4524 |
110538 |
110593 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold4524 |
110594 |
110611 |
+ |
(TCTTTTT)n |
Simple_repeat |
| scaffold4524 |
111076 |
111133 |
+ |
(GATATCA)n |
Simple_repeat |
| scaffold4524 |
111222 |
111310 |
+ |
Copia-81_ST-I |
LTR/Copia |
| scaffold4524 |
112877 |
113167 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4524 |
112879 |
112911 |
+ |
Copia-81_ST-I |
LTR/Copia |
| scaffold4524 |
113033 |
113099 |
+ |
COP8_I_MT-int |
LTR/Copia |
| scaffold4524 |
113167 |
113206 |
+ |
(AAGATCCG)n |
Simple_repeat |
| scaffold4524 |
114300 |
114409 |
+ |
RS2014 |
Unspecified |
| scaffold4524 |
114409 |
114821 |
+ |
RS63 |
Unspecified |
| scaffold4524 |
116469 |
116496 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
118341 |
118742 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold4524 |
120534 |
120824 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4524 |
120821 |
120930 |
- |
RS2897 |
Unspecified |
| scaffold4524 |
121770 |
121892 |
- |
MUDRAVI2 |
DNA/MULE-MuDR |
| scaffold4524 |
123189 |
123229 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4524 |
123230 |
123250 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
123333 |
123351 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
127409 |
127435 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4524 |
127937 |
127983 |
+ |
(GCTCGG)n |
Simple_repeat |
| scaffold4524 |
128148 |
128489 |
+ |
RS805 |
Unspecified |
| scaffold4524 |
129098 |
129164 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
129198 |
129250 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold4524 |
129397 |
129889 |
+ |
Copia-6_ST-I |
LTR/Copia |
| scaffold4524 |
130161 |
130184 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
130424 |
130673 |
+ |
RS356 |
Unspecified |
| scaffold4524 |
130651 |
130724 |
- |
RS581 |
Unspecified |
| scaffold4524 |
130751 |
130787 |
- |
PL214 |
Unspecified |
| scaffold4524 |
131477 |
131500 |
+ |
(CGG)n |
Simple_repeat |
| scaffold4524 |
131606 |
131650 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
136490 |
136560 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold4524 |
137140 |
137168 |
+ |
(GTT)n |
Simple_repeat |
| scaffold4524 |
137624 |
137904 |
- |
SHALINE2_MT |
LINE/L1 |
| scaffold4524 |
138964 |
139211 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold4524 |
139597 |
139988 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold4524 |
140023 |
140124 |
+ |
RS16382 |
Unspecified |
| scaffold4524 |
140513 |
140723 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4524 |
142036 |
142195 |
- |
RS2719 |
Unspecified |
| scaffold4524 |
142042 |
142214 |
+ |
RS233 |
Unspecified |
| scaffold4524 |
142233 |
142588 |
- |
RS4042 |
Unspecified |
| scaffold4524 |
142727 |
142870 |
- |
RS115 |
Unspecified |
| scaffold4524 |
143268 |
143382 |
- |
RS606 |
Unspecified |
| scaffold4524 |
143552 |
143577 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4524 |
143666 |
143713 |
+ |
(TATA)n |
Simple_repeat |
| scaffold4524 |
144549 |
144587 |
+ |
(AAAAG)n |
Simple_repeat |
| scaffold4524 |
144648 |
144742 |
+ |
(TAATGT)n |
Simple_repeat |
| scaffold4524 |
144857 |
144887 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
145756 |
145864 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
146469 |
146493 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
146973 |
147080 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4524 |
146973 |
147027 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4524 |
147016 |
147080 |
- |
PL153 |
Unspecified |
| scaffold4524 |
147035 |
147369 |
- |
RS1010 |
Unspecified |
| scaffold4524 |
147369 |
147426 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4524 |
147995 |
148017 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
148092 |
148141 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
148773 |
148809 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
149249 |
149326 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
149722 |
149943 |
+ |
RS16888 |
Unspecified |
| scaffold4524 |
150077 |
150799 |
- |
RS18353 |
Unspecified |
| scaffold4524 |
151010 |
151055 |
+ |
(TCTTCCT)n |
Simple_repeat |
| scaffold4524 |
151174 |
151298 |
- |
RS250 |
Unspecified |
| scaffold4524 |
151515 |
151620 |
+ |
RS250 |
Unspecified |
| scaffold4524 |
152127 |
155526 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold4524 |
155771 |
156456 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold4524 |
157438 |
157831 |
- |
RS1279 |
Unspecified |
| scaffold4524 |
158970 |
159103 |
+ |
RS9372 |
Unspecified |
| scaffold4524 |
159402 |
159435 |
+ |
(CCT)n |
Simple_repeat |
| scaffold4524 |
159971 |
160006 |
+ |
(TTTCCC)n |
Simple_repeat |
| scaffold4524 |
160712 |
160736 |
+ |
(GAATTG)n |
Simple_repeat |
| scaffold4524 |
161006 |
161062 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold4524 |
161173 |
161294 |
- |
PL764 |
Unspecified |
| scaffold4524 |
162547 |
162632 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold4524 |
162808 |
162840 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
162808 |
162955 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
162831 |
162955 |
- |
RS520 |
Unspecified |
| scaffold4524 |
163551 |
163581 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
163822 |
163865 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
163845 |
163876 |
+ |
(TATCAA)n |
Simple_repeat |
| scaffold4524 |
163881 |
163985 |
+ |
RS13405 |
Unspecified |
| scaffold4524 |
163981 |
164249 |
- |
RS1 |
Unspecified |
| scaffold4524 |
164153 |
164277 |
+ |
RS15138 |
Unspecified |
| scaffold4524 |
164245 |
164404 |
+ |
RS13405 |
Unspecified |
| scaffold4524 |
164846 |
164869 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
165296 |
165356 |
+ |
(CATC)n |
Simple_repeat |
| scaffold4524 |
165553 |
165816 |
- |
RS1 |
Unspecified |
| scaffold4524 |
165943 |
166134 |
+ |
RS1167 |
Unspecified |
| scaffold4524 |
165974 |
166160 |
+ |
RS12788 |
Unspecified |
| scaffold4524 |
166297 |
166328 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
167261 |
167372 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4524 |
167536 |
167628 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4524 |
168193 |
168299 |
- |
RS356 |
Unspecified |
| scaffold4524 |
168312 |
168353 |
+ |
(ATCCGAA)n |
Simple_repeat |
| scaffold4524 |
168354 |
168369 |
+ |
(ATATCCG)n |
Simple_repeat |
| scaffold4524 |
168390 |
168537 |
- |
hAT-17_ZM |
DNA/hAT-Ac |
| scaffold4524 |
168576 |
168606 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
168955 |
168993 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold4524 |
169091 |
169227 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold4524 |
169245 |
169408 |
- |
RS2496 |
Unspecified |
| scaffold4524 |
169927 |
169964 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
170959 |
170993 |
+ |
(TGTAAT)n |
Simple_repeat |
| scaffold4524 |
171118 |
171173 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4524 |
171365 |
171591 |
- |
RS376 |
Unspecified |
| scaffold4524 |
175941 |
175967 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
176067 |
176189 |
+ |
RS152 |
Unspecified |
| scaffold4524 |
176185 |
176324 |
- |
RS14541 |
Unspecified |
| scaffold4524 |
176186 |
176298 |
- |
RS503 |
Unspecified |
| scaffold4524 |
176366 |
176409 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4524 |
176448 |
176482 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
177271 |
177512 |
+ |
PL469 |
Unspecified |
| scaffold4524 |
177503 |
177571 |
- |
RS503 |
Unspecified |
| scaffold4524 |
177536 |
177576 |
- |
RS15122 |
Unspecified |
| scaffold4524 |
177665 |
177737 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold4524 |
178159 |
178192 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold4524 |
178895 |
178940 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold4524 |
179868 |
179982 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
179868 |
179888 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
179882 |
179982 |
+ |
RS4475 |
Unspecified |
| scaffold4524 |
180709 |
180802 |
- |
RS18358 |
Unspecified |
| scaffold4524 |
180957 |
180986 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
180987 |
181010 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
181123 |
181159 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold4524 |
181315 |
181399 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4524 |
182353 |
182487 |
- |
RS6506 |
Unspecified |
| scaffold4524 |
182605 |
182869 |
- |
RS356 |
Unspecified |
| scaffold4524 |
183172 |
183902 |
+ |
PL206 |
Unspecified |
| scaffold4524 |
183913 |
184475 |
+ |
RS1029 |
Unspecified |
| scaffold4524 |
184512 |
184552 |
+ |
hAT-5_STu |
DNA/hAT-Tip100 |
| scaffold4524 |
185035 |
185103 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4524 |
185376 |
185460 |
+ |
RS1029 |
Unspecified |
| scaffold4524 |
185845 |
185968 |
- |
PL654 |
Unspecified |
| scaffold4524 |
185859 |
185977 |
+ |
RS1010 |
Unspecified |
| scaffold4524 |
185974 |
186032 |
- |
PL654 |
Unspecified |
| scaffold4524 |
185983 |
186109 |
+ |
PL400 |
Unspecified |
| scaffold4524 |
186002 |
186109 |
+ |
PL654 |
Unspecified |
| scaffold4524 |
187235 |
187264 |
+ |
(CTTTCA)n |
Simple_repeat |
| scaffold4524 |
187297 |
187371 |
+ |
(TCC)n |
Simple_repeat |
| scaffold4524 |
187502 |
187543 |
+ |
RS17 |
Unspecified |
| scaffold4524 |
187858 |
187883 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
188228 |
188270 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4524 |
188828 |
188868 |
+ |
(TTATTCT)n |
Simple_repeat |
| scaffold4524 |
189144 |
189207 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold4524 |
189489 |
189550 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4524 |
190341 |
190417 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4524 |
192026 |
192069 |
+ |
(ATTATAC)n |
Simple_repeat |
| scaffold4524 |
193312 |
194152 |
+ |
RS402 |
Unspecified |
| scaffold4524 |
197633 |
197677 |
+ |
(GTTCGA)n |
Simple_repeat |
| scaffold4524 |
198260 |
198333 |
+ |
L1-16_STu |
LINE/L1 |
| scaffold4524 |
198355 |
198443 |
+ |
L1-17_Mad |
LINE/L1 |
| scaffold4524 |
198427 |
198578 |
+ |
L1-5_Mad |
LINE/L1 |
| scaffold4524 |
199651 |
199887 |
+ |
RS4699 |
Unspecified |
| scaffold4524 |
199997 |
200127 |
- |
RS6808 |
Unspecified |
| scaffold4524 |
200130 |
200206 |
- |
RS132 |
Unspecified |
| scaffold4524 |
200420 |
200447 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4524 |
200448 |
200627 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4524 |
200628 |
200770 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4524 |
200628 |
200666 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4524 |
200656 |
200770 |
- |
RS17927 |
Unspecified |
| scaffold4524 |
200916 |
200994 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4524 |
201158 |
201217 |
+ |
(AATATC)n |
Simple_repeat |
| scaffold4524 |
201231 |
201264 |
+ |
(GTGCCG)n |
Simple_repeat |
| scaffold4524 |
201277 |
201373 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
201575 |
201767 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
202768 |
202784 |
+ |
(TAC)n |
Simple_repeat |
| scaffold4524 |
203571 |
203626 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
203947 |
204015 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4524 |
206516 |
206566 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold4524 |
206671 |
206885 |
+ |
Gypsy18-PTR_LTR |
LTR/Gypsy |
| scaffold4524 |
209039 |
209313 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold4524 |
209387 |
209453 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
211411 |
211820 |
+ |
RS827 |
Unspecified |
| scaffold4524 |
213843 |
213947 |
+ |
RS10274 |
Unspecified |
| scaffold4524 |
214412 |
214463 |
- |
TOTO1_LP_LTR |
LTR/Copia |
| scaffold4524 |
215026 |
215052 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4524 |
215188 |
215517 |
- |
RS17793 |
Unspecified |
| scaffold4524 |
215416 |
215634 |
- |
RS2228 |
Unspecified |
| scaffold4524 |
215853 |
216053 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
216238 |
216471 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
216707 |
216723 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
217223 |
217302 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold4524 |
217890 |
217946 |
+ |
(AT)n |
Simple_repeat |
| scaffold4524 |
218084 |
218145 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4524 |
223831 |
223866 |
+ |
(TCG)n |
Simple_repeat |
| scaffold4524 |
227638 |
227678 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
228970 |
229012 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
229985 |
230165 |
+ |
RS5 |
Unspecified |
| scaffold4524 |
230314 |
230352 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold4524 |
230390 |
230481 |
- |
RS4475 |
Unspecified |
| scaffold4524 |
231086 |
231132 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
231274 |
231436 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
231657 |
231891 |
+ |
RS356 |
Unspecified |
| scaffold4524 |
231976 |
231992 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
232121 |
232208 |
+ |
RS361 |
Unspecified |
| scaffold4524 |
232240 |
232322 |
+ |
(TA)n |
Simple_repeat |
| scaffold4524 |
232351 |
232370 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
233162 |
233308 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4524 |
233236 |
233325 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold4524 |
233634 |
233753 |
+ |
(CCCGAA)n |
Simple_repeat |
| scaffold4524 |
234497 |
234630 |
+ |
RS4871 |
Unspecified |
| scaffold4524 |
235004 |
235201 |
+ |
RS7194 |
Unspecified |
| scaffold4524 |
235547 |
235583 |
+ |
A-rich |
Low_complexity |
| scaffold4524 |
236909 |
237355 |
- |
RS1814 |
Unspecified |
| scaffold4524 |
237317 |
237363 |
- |
PL539 |
Unspecified |
| scaffold4524 |
237726 |
238399 |
+ |
RS334 |
Unspecified |
| scaffold4524 |
238577 |
238596 |
+ |
(T)n |
Simple_repeat |
| scaffold4524 |
238969 |
239041 |
+ |
RS4338 |
Unspecified |
| scaffold4524 |
240029 |
240262 |
- |
RS3629 |
Unspecified |
| scaffold4524 |
240607 |
241339 |
+ |
Mariner-1_GM |
DNA/TcMar-Stowaway |
| scaffold4524 |
241583 |
241654 |
+ |
(TGTAA)n |
Simple_repeat |
| scaffold4524 |
242055 |
242197 |
- |
RS501 |
Unspecified |
| scaffold4524 |
242588 |
242917 |
- |
RS1142 |
Unspecified |
| scaffold4524 |
242799 |
243565 |
+ |
RS1235 |
Unspecified |
| scaffold4524 |
244793 |
244831 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
245443 |
245501 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold4524 |
246815 |
248644 |
- |
ATLINE1_12 |
LINE/L1 |
| scaffold4524 |
251730 |
252040 |
+ |
HARB6_ZM |
DNA/PIF-Harbinger |
| scaffold4524 |
252704 |
252834 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold4524 |
252796 |
252834 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold4524 |
256594 |
256701 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
256891 |
256919 |
+ |
(AAG)n |
Simple_repeat |
| scaffold4524 |
259368 |
259443 |
- |
Copia-42_SB-I |
LTR/Copia |
| scaffold4524 |
259395 |
259460 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold4524 |
260789 |
260853 |
+ |
GA-rich |
Low_complexity |
| scaffold4524 |
261230 |
261277 |
+ |
RS1172 |
Unspecified |
| scaffold4524 |
261237 |
261337 |
+ |
RS4475 |
Unspecified |
| scaffold4524 |
261389 |
261609 |
- |
PL789 |
Unspecified |
| scaffold4524 |
262190 |
262230 |
+ |
G-rich |
Low_complexity |
| scaffold4524 |
263334 |
263354 |
+ |
(A)n |
Simple_repeat |
| scaffold4524 |
263738 |
264010 |
+ |
hAT-6_SBi |
DNA/hAT-Tip100 |
| scaffold4524 |
264031 |
264116 |
- |
PL104 |
Unspecified |
| scaffold4524 |
266058 |
266108 |
- |
DNA9-19_Mad |
DNA/MULE-MuDR |
| scaffold4524 |
266140 |
266504 |
+ |
RS5224 |
Unspecified |
| scaffold4524 |
266505 |
267358 |
+ |
PL706 |
Unspecified |
| scaffold4524 |
268611 |
268656 |
+ |
G-rich |
Low_complexity |
| scaffold4524 |
269583 |
269714 |
- |
RS12137 |
Unspecified |
| scaffold4524 |
269780 |
270014 |
- |
RS690 |
Unspecified |
| scaffold4524 |
270034 |
270165 |
- |
RS12137 |
Unspecified |
| scaffold4524 |
270169 |
270287 |
- |
RS11663 |
Unspecified |
| scaffold4524 |
270228 |
270560 |
+ |
RS238 |
Unspecified |
| scaffold4524 |
270326 |
270613 |
+ |
RS249 |
Unspecified |
| scaffold4524 |
270564 |
270848 |
- |
RS2162 |
Unspecified |