scaffold4534 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4534 |
3 |
215 |
- |
L1-3_Mad |
LINE/L1 |
| scaffold4534 |
645 |
708 |
- |
PL136 |
Unspecified |
| scaffold4534 |
723 |
982 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold4534 |
928 |
991 |
+ |
TNR3_OS |
DNA/CMC-EnSpm |
| scaffold4534 |
1218 |
1284 |
- |
RAM9B_LTR |
LTR/Gypsy |
| scaffold4534 |
1359 |
1391 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
1783 |
1872 |
+ |
PL111 |
Unspecified |
| scaffold4534 |
1797 |
1872 |
- |
RS254 |
Unspecified |
| scaffold4534 |
3183 |
3446 |
+ |
PL167 |
Unspecified |
| scaffold4534 |
3665 |
3723 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
3760 |
3801 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold4534 |
4580 |
5047 |
+ |
RS5815 |
Unspecified |
| scaffold4534 |
5112 |
5189 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4534 |
5738 |
5778 |
+ |
(GTGAGT)n |
Simple_repeat |
| scaffold4534 |
5897 |
6089 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4534 |
6716 |
6769 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
7831 |
7921 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4534 |
7831 |
7954 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4534 |
7917 |
7954 |
- |
PL301 |
Unspecified |
| scaffold4534 |
7923 |
7958 |
- |
PL503 |
Unspecified |
| scaffold4534 |
7923 |
7963 |
- |
PL473 |
Unspecified |
| scaffold4534 |
8062 |
8091 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold4534 |
10633 |
10652 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4534 |
10870 |
10910 |
+ |
(TGGAG)n |
Simple_repeat |
| scaffold4534 |
11031 |
11079 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold4534 |
13161 |
13182 |
+ |
(A)n |
Simple_repeat |
| scaffold4534 |
13481 |
13780 |
- |
PL803 |
Unspecified |
| scaffold4534 |
16100 |
16222 |
+ |
PL276 |
Unspecified |
| scaffold4534 |
16333 |
16378 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
16519 |
16591 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
16634 |
16655 |
+ |
(A)n |
Simple_repeat |
| scaffold4534 |
16686 |
16763 |
+ |
(CCACCTT)n |
Simple_repeat |
| scaffold4534 |
16767 |
16847 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
17162 |
17241 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
17373 |
17410 |
+ |
(TATATCA)n |
Simple_repeat |
| scaffold4534 |
17619 |
17660 |
+ |
(TTAATTA)n |
Simple_repeat |
| scaffold4534 |
17661 |
17736 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold4534 |
20298 |
20370 |
+ |
PL543 |
Unspecified |
| scaffold4534 |
20309 |
20370 |
- |
PL646 |
Unspecified |
| scaffold4534 |
20660 |
20687 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold4534 |
21692 |
21721 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold4534 |
22321 |
22351 |
+ |
(AACCC)n |
Simple_repeat |
| scaffold4534 |
22440 |
22469 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold4534 |
22917 |
22968 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4534 |
23739 |
23843 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold4534 |
25289 |
25361 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4534 |
25326 |
25428 |
+ |
(TCGTAT)n |
Simple_repeat |
| scaffold4534 |
25830 |
25849 |
+ |
(A)n |
Simple_repeat |
| scaffold4534 |
26081 |
26115 |
+ |
(A)n |
Simple_repeat |
| scaffold4534 |
26348 |
26402 |
+ |
(AATT)n |
Simple_repeat |
| scaffold4534 |
26407 |
26443 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4534 |
26956 |
27124 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4534 |
27183 |
27279 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4534 |
27310 |
27343 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
28310 |
28343 |
- |
RS279 |
Unspecified |
| scaffold4534 |
28840 |
28869 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold4534 |
28846 |
28939 |
+ |
Gypsy-3_PD-I |
LTR/Gypsy |
| scaffold4534 |
29180 |
29315 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4534 |
30203 |
30276 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4534 |
30569 |
30685 |
+ |
EnSpm-1_GM |
DNA/CMC-EnSpm |
| scaffold4534 |
30959 |
31045 |
+ |
(AATTAG)n |
Simple_repeat |
| scaffold4534 |
31349 |
31381 |
+ |
(CAGCC)n |
Simple_repeat |
| scaffold4534 |
31491 |
31542 |
+ |
(AGCCC)n |
Simple_repeat |
| scaffold4534 |
31577 |
31681 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold4534 |
33564 |
33630 |
+ |
(TTTATTG)n |
Simple_repeat |
| scaffold4534 |
33649 |
33708 |
+ |
(T)n |
Simple_repeat |
| scaffold4534 |
35245 |
35259 |
- |
DNA3-8_STu |
DNA |
| scaffold4534 |
35260 |
35330 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4534 |
35331 |
35368 |
- |
DNA3-8_STu |
DNA |
| scaffold4534 |
35369 |
35404 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4534 |
35405 |
35419 |
- |
DNA3-8_STu |
DNA |
| scaffold4534 |
35420 |
35463 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold4534 |
35649 |
35741 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4534 |
35857 |
35949 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4534 |
35951 |
35979 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4534 |
36062 |
36124 |
+ |
RS1120 |
Unspecified |
| scaffold4534 |
36584 |
36612 |
+ |
GA-rich |
Low_complexity |
| scaffold4534 |
36802 |
36866 |
+ |
(TG)n |
Simple_repeat |
| scaffold4534 |
36802 |
37363 |
+ |
(TG)n |
Simple_repeat |
| scaffold4534 |
36843 |
37363 |
- |
RS5503 |
Unspecified |
| scaffold4534 |
37429 |
37487 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold4534 |
37782 |
37933 |
- |
MIDWAY |
DNA/hAT-Tip100 |
| scaffold4534 |
37805 |
38020 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4534 |
38841 |
38892 |
+ |
(TTAACA)n |
Simple_repeat |
| scaffold4534 |
39328 |
39363 |
+ |
(T)n |
Simple_repeat |
| scaffold4534 |
41469 |
41507 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
41791 |
41820 |
+ |
(GATTTG)n |
Simple_repeat |
| scaffold4534 |
41898 |
41935 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold4534 |
42280 |
42744 |
- |
RS283 |
Unspecified |
| scaffold4534 |
42740 |
43099 |
- |
RS614 |
Unspecified |
| scaffold4534 |
45848 |
45891 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold4534 |
46036 |
46097 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4534 |
46134 |
48290 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold4534 |
48325 |
48557 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4534 |
48764 |
48798 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4534 |
49139 |
49167 |
+ |
A-rich |
Low_complexity |
| scaffold4534 |
49902 |
49962 |
+ |
(T)n |
Simple_repeat |
| scaffold4534 |
50049 |
50486 |
+ |
PL926 |
Unspecified |
| scaffold4534 |
50653 |
50686 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold4534 |
51851 |
52072 |
+ |
RS13321 |
Unspecified |
| scaffold4534 |
52337 |
52389 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold4534 |
52389 |
53066 |
- |
RS695 |
Unspecified |
| scaffold4534 |
52396 |
52990 |
+ |
PL60 |
Unspecified |
| scaffold4534 |
53038 |
53661 |
- |
RS1210 |
Unspecified |
| scaffold4534 |
53823 |
54438 |
- |
PL522 |
Unspecified |
| scaffold4534 |
54475 |
54747 |
+ |
PL469 |
Unspecified |
| scaffold4534 |
54732 |
55240 |
- |
RS1210 |
Unspecified |
| scaffold4534 |
55236 |
55313 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold4534 |
55529 |
55571 |
+ |
(T)n |
Simple_repeat |
| scaffold4534 |
57413 |
57839 |
- |
RS387 |
Unspecified |