scaffold46209 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold46209 |
426 |
564 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold46209 |
487 |
526 |
+ |
A-rich |
Low_complexity |
| scaffold46209 |
2063 |
2102 |
+ |
A-rich |
Low_complexity |
| scaffold46209 |
2642 |
2707 |
+ |
(TT)n |
Simple_repeat |
| scaffold46209 |
4247 |
4297 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold46209 |
4735 |
4774 |
+ |
A-rich |
Low_complexity |
| scaffold46209 |
5240 |
5333 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold46209 |
6226 |
6301 |
+ |
RS2145 |
Unspecified |
| scaffold46209 |
8200 |
8252 |
+ |
(AAC)n |
Simple_repeat |
| scaffold46209 |
8430 |
8464 |
+ |
(AT)n |
Simple_repeat |
| scaffold46209 |
8766 |
8865 |
+ |
(CCA)n |
Simple_repeat |
| scaffold46209 |
9084 |
9124 |
+ |
(GGT)n |
Simple_repeat |
| scaffold46209 |
9228 |
9256 |
+ |
(T)n |
Simple_repeat |
| scaffold46209 |
9307 |
9361 |
+ |
(TGG)n |
Simple_repeat |
| scaffold46209 |
10059 |
10178 |
- |
RS8591 |
Unspecified |
| scaffold46209 |
10316 |
10353 |
+ |
(TGG)n |
Simple_repeat |
| scaffold46209 |
10462 |
10579 |
+ |
(GGT)n |
Simple_repeat |
| scaffold46209 |
10820 |
10871 |
+ |
(TA)n |
Simple_repeat |
| scaffold46209 |
11240 |
11285 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold46209 |
11946 |
11978 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold46209 |
12348 |
12383 |
+ |
A-rich |
Low_complexity |
| scaffold46209 |
12586 |
12837 |
+ |
RS96 |
Unspecified |
| scaffold46209 |
12917 |
13051 |
+ |
(CTCTC)n |
Simple_repeat |
| scaffold46209 |
13114 |
13187 |
+ |
(TTG)n |
Simple_repeat |
| scaffold46209 |
13159 |
13219 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold46209 |
14051 |
14105 |
+ |
(A)n |
Simple_repeat |
| scaffold46209 |
14150 |
14201 |
- |
RS2318 |
Unspecified |
| scaffold46209 |
14167 |
14207 |
+ |
RS499 |
Unspecified |
| scaffold46209 |
15040 |
15076 |
+ |
(GGT)n |
Simple_repeat |
| scaffold46209 |
15189 |
15222 |
+ |
(AAGGC)n |
Simple_repeat |
| scaffold46209 |
15303 |
15347 |
+ |
(TATT)n |
Simple_repeat |
| scaffold46209 |
16378 |
17496 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold46209 |
16688 |
17439 |
- |
L1-1_GM |
LINE/L1 |
| scaffold46209 |
17498 |
18302 |
+ |
RS947 |
Unspecified |
| scaffold46209 |
18306 |
18350 |
+ |
(GTTTGGT)n |
Simple_repeat |
| scaffold46209 |
18351 |
18357 |
+ |
(TTGAGT)n |
Simple_repeat |
| scaffold46209 |
19698 |
19736 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold46209 |
19843 |
20072 |
- |
RS12687 |
Unspecified |
| scaffold46209 |
20296 |
20440 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold46209 |
20899 |
21054 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold46209 |
21206 |
21264 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold46209 |
21387 |
22798 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold46209 |
22949 |
24429 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold46209 |
25223 |
25248 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold46209 |
25363 |
25369 |
+ |
(TGAGTTT)n |
Simple_repeat |
| scaffold46209 |
25370 |
25421 |
+ |
(TTGAGT)n |
Simple_repeat |
| scaffold46209 |
25887 |
26148 |
- |
RS1114 |
Unspecified |
| scaffold46209 |
26838 |
26871 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46209 |
27498 |
27529 |
+ |
(T)n |
Simple_repeat |
| scaffold46209 |
28715 |
28758 |
+ |
(CACGAAA)n |
Simple_repeat |
| scaffold46209 |
28805 |
29493 |
+ |
RS655 |
Unspecified |
| scaffold46209 |
29489 |
29844 |
- |
RS869 |
Unspecified |
| scaffold46209 |
29845 |
29892 |
+ |
RS616 |
Unspecified |