scaffold46738 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold46738 |
1 |
585 |
- |
RS2918 |
Unspecified |
| scaffold46738 |
333 |
371 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
989 |
3170 |
+ |
RS500 |
Unspecified |
| scaffold46738 |
3625 |
3915 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold46738 |
4114 |
4404 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold46738 |
4685 |
4904 |
+ |
RS3388 |
Unspecified |
| scaffold46738 |
4758 |
4960 |
- |
RS851 |
Unspecified |
| scaffold46738 |
4783 |
5141 |
+ |
RS3734 |
Unspecified |
| scaffold46738 |
5842 |
5990 |
+ |
RS622 |
Unspecified |
| scaffold46738 |
6232 |
6269 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold46738 |
6605 |
6660 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
6665 |
6895 |
- |
RS3418 |
Unspecified |
| scaffold46738 |
6979 |
6996 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
7460 |
7491 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
8100 |
8402 |
- |
RS6648 |
Unspecified |
| scaffold46738 |
9353 |
9405 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold46738 |
10050 |
10101 |
+ |
(AT)n |
Simple_repeat |
| scaffold46738 |
10241 |
10317 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
10682 |
10726 |
+ |
(ATATCCG)n |
Simple_repeat |
| scaffold46738 |
11091 |
11163 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
11963 |
11982 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
12058 |
12320 |
+ |
RS41 |
Unspecified |
| scaffold46738 |
12319 |
12458 |
+ |
COP21_I_MT-int |
LTR/Copia |
| scaffold46738 |
12633 |
12716 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold46738 |
13039 |
13117 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold46738 |
16377 |
16627 |
- |
RS145 |
Unspecified |
| scaffold46738 |
18087 |
18265 |
- |
RS503 |
Unspecified |
| scaffold46738 |
19149 |
19302 |
- |
RS240 |
Unspecified |
| scaffold46738 |
19299 |
19394 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
19392 |
19497 |
- |
RS240 |
Unspecified |
| scaffold46738 |
19898 |
19936 |
+ |
(TTACATT)n |
Simple_repeat |
| scaffold46738 |
19950 |
19987 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
20012 |
20052 |
+ |
(TTGCTAG)n |
Simple_repeat |
| scaffold46738 |
20082 |
20109 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold46738 |
20181 |
20222 |
- |
RS17699 |
Unspecified |
| scaffold46738 |
20189 |
20447 |
- |
RS1 |
Unspecified |
| scaffold46738 |
20560 |
20621 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold46738 |
20693 |
20792 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold46738 |
21450 |
21467 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
23031 |
24500 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold46738 |
23187 |
23326 |
- |
RAVLIN5_MT |
LINE/L1 |
| scaffold46738 |
23304 |
24146 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold46738 |
24374 |
24448 |
- |
L1-18_STu |
LINE/L1 |
| scaffold46738 |
24913 |
24966 |
- |
L1-15_GM |
LINE/L1 |
| scaffold46738 |
26849 |
26906 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
26849 |
27009 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
26881 |
27009 |
- |
RS17927 |
Unspecified |
| scaffold46738 |
27088 |
27156 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
27160 |
27371 |
- |
PL271 |
Unspecified |
| scaffold46738 |
27537 |
27577 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
27952 |
27989 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
27952 |
28176 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
27952 |
28290 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
27972 |
28176 |
- |
RS41 |
Unspecified |
| scaffold46738 |
27978 |
28290 |
+ |
RS2386 |
Unspecified |
| scaffold46738 |
29061 |
29164 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
29282 |
29544 |
+ |
RS82 |
Unspecified |
| scaffold46738 |
29547 |
29594 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold46738 |
29608 |
29683 |
+ |
(TATG)n |
Simple_repeat |
| scaffold46738 |
30102 |
30282 |
+ |
RS1560 |
Unspecified |
| scaffold46738 |
30296 |
30340 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
30618 |
30688 |
+ |
(TGTTTTG)n |
Simple_repeat |
| scaffold46738 |
30788 |
30821 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold46738 |
31411 |
31580 |
+ |
RS17326 |
Unspecified |
| scaffold46738 |
31516 |
31611 |
+ |
RS84 |
Unspecified |
| scaffold46738 |
32401 |
32434 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
32525 |
32702 |
- |
RS10029 |
Unspecified |
| scaffold46738 |
32705 |
32745 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
32841 |
32946 |
- |
RS3612 |
Unspecified |
| scaffold46738 |
33059 |
33211 |
+ |
RS3622 |
Unspecified |
| scaffold46738 |
33102 |
33225 |
+ |
RS2494 |
Unspecified |
| scaffold46738 |
33346 |
33422 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
33346 |
33554 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
33398 |
33554 |
- |
RS1913 |
Unspecified |
| scaffold46738 |
33637 |
33701 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
33637 |
33844 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
33688 |
33844 |
+ |
RS1287 |
Unspecified |
| scaffold46738 |
33707 |
33884 |
+ |
RS10029 |
Unspecified |
| scaffold46738 |
33892 |
33933 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold46738 |
33981 |
34018 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
35516 |
35588 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold46738 |
36397 |
36437 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
36531 |
36591 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold46738 |
39272 |
39307 |
+ |
(ACATTAA)n |
Simple_repeat |
| scaffold46738 |
39983 |
40047 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold46738 |
40282 |
40493 |
+ |
RS458 |
Unspecified |
| scaffold46738 |
40634 |
40655 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
41978 |
42007 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
43905 |
43968 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
43980 |
44195 |
- |
RS10 |
Unspecified |
| scaffold46738 |
45058 |
45134 |
- |
PL169 |
Unspecified |
| scaffold46738 |
45211 |
45237 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold46738 |
45645 |
45720 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold46738 |
46190 |
46220 |
+ |
(TA)n |
Simple_repeat |
| scaffold46738 |
47537 |
47630 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
47629 |
47931 |
+ |
PL289 |
Unspecified |
| scaffold46738 |
47750 |
48263 |
- |
PL884 |
Unspecified |
| scaffold46738 |
48463 |
48733 |
- |
RS1943 |
Unspecified |
| scaffold46738 |
48831 |
48909 |
+ |
PL289 |
Unspecified |
| scaffold46738 |
48834 |
48918 |
+ |
PL296 |
Unspecified |
| scaffold46738 |
49184 |
49363 |
- |
RS5 |
Unspecified |
| scaffold46738 |
49834 |
49900 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
50060 |
50223 |
+ |
RS2719 |
Unspecified |
| scaffold46738 |
50319 |
50566 |
- |
RS4 |
Unspecified |
| scaffold46738 |
50721 |
50744 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold46738 |
51199 |
51228 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold46738 |
51348 |
51386 |
+ |
(TATCGG)n |
Simple_repeat |
| scaffold46738 |
51457 |
51493 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold46738 |
51762 |
51811 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
51812 |
51834 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
51896 |
51989 |
- |
PL228 |
Unspecified |
| scaffold46738 |
52513 |
52545 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold46738 |
52701 |
52760 |
+ |
(TATATA)n |
Simple_repeat |
| scaffold46738 |
52784 |
52812 |
+ |
G-rich |
Low_complexity |
| scaffold46738 |
53242 |
53310 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
53523 |
53540 |
+ |
(TA)n |
Simple_repeat |
| scaffold46738 |
53953 |
53998 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
54177 |
54246 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold46738 |
54720 |
54765 |
+ |
(AATTTTT)n |
Simple_repeat |
| scaffold46738 |
55050 |
55138 |
+ |
(CATA)n |
Simple_repeat |
| scaffold46738 |
55423 |
55575 |
- |
RS559 |
Unspecified |
| scaffold46738 |
55599 |
55690 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
55796 |
55831 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
55836 |
55871 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
56049 |
56100 |
- |
RS1180 |
Unspecified |
| scaffold46738 |
56443 |
56508 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
56817 |
57010 |
- |
RS4 |
Unspecified |
| scaffold46738 |
57431 |
57465 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
57646 |
57705 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
57946 |
57986 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
58521 |
58544 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
58723 |
58775 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
58977 |
59186 |
- |
RS7079 |
Unspecified |
| scaffold46738 |
59428 |
59451 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
59455 |
59605 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold46738 |
59543 |
59605 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold46738 |
59821 |
59871 |
+ |
(ATGATTT)n |
Simple_repeat |
| scaffold46738 |
60215 |
60263 |
+ |
(AT)n |
Simple_repeat |
| scaffold46738 |
60386 |
60420 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold46738 |
60430 |
60470 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
61801 |
61819 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
62046 |
62076 |
+ |
(TTGATA)n |
Simple_repeat |
| scaffold46738 |
62212 |
62441 |
- |
RS702 |
Unspecified |
| scaffold46738 |
64440 |
64470 |
+ |
(CGATTT)n |
Simple_repeat |
| scaffold46738 |
64484 |
64573 |
+ |
(ATG)n |
Simple_repeat |
| scaffold46738 |
64898 |
65102 |
+ |
RS1018 |
Unspecified |
| scaffold46738 |
65713 |
65764 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold46738 |
66595 |
66655 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
66878 |
66932 |
+ |
(AGTCAA)n |
Simple_repeat |
| scaffold46738 |
67580 |
67643 |
+ |
(AACACTA)n |
Simple_repeat |
| scaffold46738 |
67803 |
67853 |
+ |
(AAGATGAG)n |
Simple_repeat |
| scaffold46738 |
68113 |
68233 |
- |
RS3302 |
Unspecified |
| scaffold46738 |
68187 |
68309 |
+ |
RS2257 |
Unspecified |
| scaffold46738 |
68427 |
69311 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold46738 |
68620 |
69007 |
+ |
Copia-30-I_VV |
LTR/Copia |
| scaffold46738 |
69215 |
69278 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
69453 |
70723 |
+ |
Copia-30-I_VV |
LTR/Copia |
| scaffold46738 |
71035 |
72139 |
- |
Copia1-PTR_I-int |
LTR/Copia |
| scaffold46738 |
71172 |
72696 |
+ |
Copia-30-I_VV |
LTR/Copia |
| scaffold46738 |
72697 |
72817 |
- |
RS3302 |
Unspecified |
| scaffold46738 |
72771 |
72893 |
+ |
RS2257 |
Unspecified |
| scaffold46738 |
73026 |
73054 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold46738 |
73271 |
73316 |
- |
RS18371 |
Unspecified |
| scaffold46738 |
73504 |
73731 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold46738 |
73757 |
73852 |
- |
RS13929 |
Unspecified |
| scaffold46738 |
73904 |
73934 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold46738 |
74846 |
75007 |
- |
PL735 |
Unspecified |
| scaffold46738 |
75058 |
75090 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
75649 |
75915 |
- |
RS17600 |
Unspecified |
| scaffold46738 |
76297 |
76333 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
76557 |
76729 |
+ |
RS133 |
Unspecified |
| scaffold46738 |
76862 |
76896 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold46738 |
76978 |
77626 |
- |
PL700 |
Unspecified |
| scaffold46738 |
77854 |
78019 |
- |
PL700 |
Unspecified |
| scaffold46738 |
77898 |
78328 |
- |
PL700 |
Unspecified |
| scaffold46738 |
79625 |
79697 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
79698 |
79912 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
81680 |
81722 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold46738 |
81703 |
81723 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
82653 |
82746 |
+ |
RS549 |
Unspecified |
| scaffold46738 |
82752 |
82806 |
+ |
(TT)n |
Simple_repeat |
| scaffold46738 |
84345 |
84375 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold46738 |
84587 |
84652 |
- |
RS10491 |
Unspecified |
| scaffold46738 |
84622 |
84740 |
- |
PL436 |
Unspecified |
| scaffold46738 |
84653 |
84753 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
85187 |
85310 |
+ |
PL232 |
Unspecified |
| scaffold46738 |
85217 |
85331 |
+ |
RS1701 |
Unspecified |
| scaffold46738 |
86597 |
86632 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold46738 |
87704 |
87724 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
87843 |
87867 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
89532 |
89772 |
- |
RS16888 |
Unspecified |
| scaffold46738 |
90056 |
90091 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
90401 |
90421 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
90658 |
91042 |
+ |
PL582 |
Unspecified |
| scaffold46738 |
91701 |
91801 |
+ |
RS2993 |
Unspecified |
| scaffold46738 |
92189 |
92397 |
- |
RS16888 |
Unspecified |
| scaffold46738 |
92594 |
92634 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold46738 |
92751 |
92776 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
92777 |
92783 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold46738 |
93201 |
93581 |
+ |
PL582 |
Unspecified |
| scaffold46738 |
93823 |
93841 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
94347 |
94386 |
+ |
(CGG)n |
Simple_repeat |
| scaffold46738 |
96241 |
96267 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
96268 |
96275 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold46738 |
97672 |
97697 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold46738 |
97672 |
97783 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold46738 |
97690 |
97783 |
+ |
RS1959 |
Unspecified |
| scaffold46738 |
102668 |
102779 |
+ |
RS4475 |
Unspecified |
| scaffold46738 |
103333 |
103384 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
103451 |
103491 |
+ |
(TGAAT)n |
Simple_repeat |
| scaffold46738 |
104025 |
104296 |
- |
RS26 |
Unspecified |
| scaffold46738 |
104950 |
105000 |
- |
RS17699 |
Unspecified |
| scaffold46738 |
105002 |
105091 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
105094 |
105356 |
- |
RS240 |
Unspecified |
| scaffold46738 |
105458 |
105715 |
- |
RS26 |
Unspecified |
| scaffold46738 |
107396 |
107440 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold46738 |
108293 |
108386 |
- |
RS145 |
Unspecified |
| scaffold46738 |
108397 |
108477 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
108649 |
108695 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
108938 |
109002 |
+ |
(ATG)n |
Simple_repeat |
| scaffold46738 |
109567 |
109576 |
+ |
(ATA)n |
Simple_repeat |
| scaffold46738 |
109577 |
109628 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
109629 |
109647 |
+ |
(ATA)n |
Simple_repeat |
| scaffold46738 |
109781 |
109937 |
- |
RS2820 |
Unspecified |
| scaffold46738 |
110065 |
110112 |
+ |
(TT)n |
Simple_repeat |
| scaffold46738 |
110128 |
110178 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold46738 |
110609 |
110641 |
+ |
(ATTTCT)n |
Simple_repeat |
| scaffold46738 |
111157 |
111190 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold46738 |
112446 |
112538 |
+ |
RS4475 |
Unspecified |
| scaffold46738 |
113208 |
113282 |
+ |
RS9775 |
Unspecified |
| scaffold46738 |
113635 |
113662 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold46738 |
113699 |
113786 |
+ |
RS4519 |
Unspecified |
| scaffold46738 |
113984 |
114015 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
114495 |
114643 |
+ |
RS22 |
Unspecified |
| scaffold46738 |
114954 |
115010 |
- |
RS777 |
Unspecified |
| scaffold46738 |
115391 |
115425 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold46738 |
116303 |
116357 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
116529 |
116550 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
117300 |
117345 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold46738 |
117726 |
117804 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
117806 |
117851 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
118871 |
118971 |
- |
RS250 |
Unspecified |
| scaffold46738 |
119512 |
119637 |
+ |
RS38 |
Unspecified |
| scaffold46738 |
119811 |
119850 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
120114 |
120185 |
- |
PL105 |
Unspecified |
| scaffold46738 |
120344 |
120493 |
+ |
ATCopia34_LTR |
LTR/Copia |
| scaffold46738 |
120998 |
121018 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
122010 |
122289 |
- |
PL586 |
Unspecified |
| scaffold46738 |
122521 |
122570 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
123488 |
123516 |
+ |
(AATT)n |
Simple_repeat |
| scaffold46738 |
125821 |
125857 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
126902 |
126992 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold46738 |
128013 |
128067 |
+ |
RS18371 |
Unspecified |
| scaffold46738 |
128023 |
128082 |
- |
RS1854 |
Unspecified |
| scaffold46738 |
131409 |
131462 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold46738 |
131572 |
131671 |
+ |
RS8095 |
Unspecified |
| scaffold46738 |
131928 |
132112 |
+ |
RS1848 |
Unspecified |
| scaffold46738 |
131928 |
132153 |
+ |
RS1 |
Unspecified |
| scaffold46738 |
133308 |
133356 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
136017 |
136055 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
136071 |
136626 |
+ |
PL782 |
Unspecified |
| scaffold46738 |
136591 |
136642 |
+ |
RS15730 |
Unspecified |
| scaffold46738 |
137070 |
137158 |
+ |
RS972 |
Unspecified |
| scaffold46738 |
137467 |
137483 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
138638 |
138673 |
- |
Gypsy-129_ZM-I |
LTR/Gypsy |
| scaffold46738 |
140071 |
140325 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
140291 |
140325 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
141977 |
141995 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
142627 |
142945 |
- |
RS8 |
Unspecified |
| scaffold46738 |
143574 |
143904 |
- |
RS8 |
Unspecified |
| scaffold46738 |
144785 |
144811 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
145402 |
145450 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
145551 |
145757 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold46738 |
145790 |
145869 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold46738 |
148666 |
148762 |
+ |
RS9448 |
Unspecified |
| scaffold46738 |
149625 |
149651 |
+ |
(AC)n |
Simple_repeat |
| scaffold46738 |
149830 |
149879 |
+ |
RS18111 |
Unspecified |
| scaffold46738 |
150087 |
150181 |
- |
RS4475 |
Unspecified |
| scaffold46738 |
150237 |
150268 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
150389 |
150436 |
+ |
(AATTACA)n |
Simple_repeat |
| scaffold46738 |
151192 |
151232 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
151714 |
151834 |
+ |
RS79 |
Unspecified |
| scaffold46738 |
152170 |
152200 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold46738 |
152911 |
153094 |
+ |
PL69 |
Unspecified |
| scaffold46738 |
154542 |
154569 |
+ |
(AT)n |
Simple_repeat |
| scaffold46738 |
154690 |
154728 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
154779 |
154817 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
154866 |
154889 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
155121 |
155160 |
+ |
(ATGTTTT)n |
Simple_repeat |
| scaffold46738 |
156413 |
156441 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold46738 |
156675 |
156703 |
+ |
(TACAA)n |
Simple_repeat |
| scaffold46738 |
157120 |
157179 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold46738 |
157222 |
157267 |
+ |
(TATTAAT)n |
Simple_repeat |
| scaffold46738 |
157558 |
157761 |
+ |
RS176 |
Unspecified |
| scaffold46738 |
157660 |
157983 |
- |
RS1490 |
Unspecified |
| scaffold46738 |
165393 |
165446 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold46738 |
165684 |
165718 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
166173 |
166196 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
167338 |
167393 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
167792 |
167850 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold46738 |
167988 |
168157 |
- |
RS18020 |
Unspecified |
| scaffold46738 |
169122 |
169481 |
- |
RS863 |
Unspecified |
| scaffold46738 |
174888 |
174925 |
+ |
(TTGCAAT)n |
Simple_repeat |
| scaffold46738 |
174979 |
175080 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
174986 |
175094 |
+ |
RS6320 |
Unspecified |
| scaffold46738 |
175633 |
175676 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
176262 |
176295 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
176451 |
176517 |
+ |
(TT)n |
Simple_repeat |
| scaffold46738 |
177298 |
177376 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
177298 |
177735 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
177343 |
177735 |
- |
RS2021 |
Unspecified |
| scaffold46738 |
178163 |
178194 |
+ |
(AATT)n |
Simple_repeat |
| scaffold46738 |
178849 |
178930 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
178947 |
179053 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
183997 |
184039 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold46738 |
185202 |
185246 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
185550 |
185597 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
185823 |
185860 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold46738 |
187939 |
188043 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold46738 |
190613 |
190642 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
190894 |
190918 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
191049 |
191095 |
+ |
(ATACAA)n |
Simple_repeat |
| scaffold46738 |
192410 |
192429 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
192555 |
192571 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
193962 |
193990 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
194322 |
194363 |
+ |
(TTTTTGT)n |
Simple_repeat |
| scaffold46738 |
194720 |
194755 |
+ |
(TTCAACT)n |
Simple_repeat |
| scaffold46738 |
194840 |
194884 |
+ |
(ACA)n |
Simple_repeat |
| scaffold46738 |
194907 |
194935 |
+ |
(CAA)n |
Simple_repeat |
| scaffold46738 |
195493 |
195516 |
+ |
(AAC)n |
Simple_repeat |
| scaffold46738 |
195728 |
195755 |
+ |
(AAC)n |
Simple_repeat |
| scaffold46738 |
196903 |
197097 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold46738 |
197115 |
197158 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold46738 |
197933 |
197969 |
+ |
(GTAAT)n |
Simple_repeat |
| scaffold46738 |
198153 |
198404 |
+ |
RS16888 |
Unspecified |
| scaffold46738 |
198924 |
198988 |
- |
RS17105 |
Unspecified |
| scaffold46738 |
200197 |
200241 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
200288 |
200327 |
+ |
Helitron-3_ZM |
RC/Helitron |
| scaffold46738 |
202232 |
202388 |
+ |
RS303 |
Unspecified |
| scaffold46738 |
202610 |
202681 |
- |
RS16201 |
Unspecified |
| scaffold46738 |
202610 |
202698 |
+ |
RS3465 |
Unspecified |
| scaffold46738 |
202839 |
202895 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold46738 |
203144 |
203183 |
+ |
Helitron-3_ZM |
RC/Helitron |
| scaffold46738 |
203673 |
203694 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
204116 |
204163 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold46738 |
204198 |
204286 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold46738 |
206115 |
206316 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
206358 |
206544 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold46738 |
206760 |
206783 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
208482 |
208604 |
+ |
RS303 |
Unspecified |
| scaffold46738 |
208974 |
209031 |
+ |
RS1933 |
Unspecified |
| scaffold46738 |
209032 |
209268 |
+ |
RS1933 |
Unspecified |
| scaffold46738 |
210165 |
210185 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
210648 |
210681 |
+ |
(TAACAT)n |
Simple_repeat |
| scaffold46738 |
211003 |
211036 |
+ |
(ATCGAA)n |
Simple_repeat |
| scaffold46738 |
211409 |
211455 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold46738 |
212163 |
212366 |
+ |
RS28 |
Unspecified |
| scaffold46738 |
212404 |
212652 |
+ |
RS581 |
Unspecified |
| scaffold46738 |
212785 |
212861 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
214536 |
214570 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
214771 |
214789 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
215381 |
215557 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
215871 |
215895 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
215977 |
216124 |
- |
RS54 |
Unspecified |
| scaffold46738 |
216291 |
216349 |
+ |
RS9844 |
Unspecified |
| scaffold46738 |
216366 |
216426 |
- |
RS9844 |
Unspecified |
| scaffold46738 |
216429 |
216558 |
+ |
RS18 |
Unspecified |
| scaffold46738 |
217112 |
217159 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
220263 |
220293 |
+ |
(ATG)n |
Simple_repeat |
| scaffold46738 |
220508 |
221077 |
+ |
RS132 |
Unspecified |
| scaffold46738 |
226897 |
227150 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold46738 |
226933 |
227150 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold46738 |
228212 |
228248 |
+ |
(CTGACAA)n |
Simple_repeat |
| scaffold46738 |
229666 |
229718 |
+ |
(CT)n |
Simple_repeat |
| scaffold46738 |
230475 |
230664 |
+ |
RS9764 |
Unspecified |
| scaffold46738 |
230773 |
230808 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
230966 |
231045 |
- |
RS12885 |
Unspecified |
| scaffold46738 |
230974 |
231055 |
- |
RS13929 |
Unspecified |
| scaffold46738 |
231305 |
231335 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
231814 |
231851 |
+ |
(CAAGTTA)n |
Simple_repeat |
| scaffold46738 |
232998 |
233254 |
+ |
(TCAGT)n |
Simple_repeat |
| scaffold46738 |
233438 |
233502 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold46738 |
233546 |
233615 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold46738 |
234593 |
234636 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
235642 |
235735 |
- |
RS16382 |
Unspecified |
| scaffold46738 |
236068 |
236086 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
236125 |
236167 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
236400 |
236427 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
236980 |
237075 |
+ |
(TAGATTA)n |
Simple_repeat |
| scaffold46738 |
237148 |
237186 |
+ |
(TATCTTA)n |
Simple_repeat |
| scaffold46738 |
237148 |
237299 |
+ |
(TATCTTA)n |
Simple_repeat |
| scaffold46738 |
237177 |
237299 |
+ |
RS10414 |
Unspecified |
| scaffold46738 |
237616 |
237650 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold46738 |
237949 |
237995 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold46738 |
238113 |
238171 |
+ |
(TATAGAA)n |
Simple_repeat |
| scaffold46738 |
238268 |
238306 |
+ |
(TATCTTA)n |
Simple_repeat |
| scaffold46738 |
238412 |
238460 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
238702 |
238738 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold46738 |
239004 |
239025 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
239657 |
239764 |
- |
RS4475 |
Unspecified |
| scaffold46738 |
239662 |
239778 |
+ |
RS16911 |
Unspecified |
| scaffold46738 |
239781 |
239825 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
239841 |
240020 |
+ |
RS1 |
Unspecified |
| scaffold46738 |
241007 |
241056 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
241142 |
241401 |
+ |
RS26 |
Unspecified |
| scaffold46738 |
242306 |
242364 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold46738 |
243253 |
243455 |
+ |
RS18371 |
Unspecified |
| scaffold46738 |
243921 |
244002 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold46738 |
244219 |
244245 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
244246 |
244257 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold46738 |
248035 |
248823 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold46738 |
249224 |
249245 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
250102 |
250138 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
250538 |
250626 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
255717 |
255759 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold46738 |
255943 |
256062 |
+ |
RS285 |
Unspecified |
| scaffold46738 |
256439 |
256664 |
+ |
RS4 |
Unspecified |
| scaffold46738 |
257152 |
257182 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
257327 |
257353 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold46738 |
257362 |
257392 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
257569 |
257604 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
257667 |
257736 |
+ |
(TCA)n |
Simple_repeat |
| scaffold46738 |
257758 |
257803 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
257882 |
257986 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold46738 |
257989 |
258019 |
+ |
(TG)n |
Simple_repeat |
| scaffold46738 |
260973 |
261016 |
+ |
(AATACT)n |
Simple_repeat |
| scaffold46738 |
262181 |
262275 |
+ |
RS4475 |
Unspecified |
| scaffold46738 |
262603 |
262644 |
+ |
(CACCA)n |
Simple_repeat |
| scaffold46738 |
262689 |
262727 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold46738 |
262795 |
262912 |
+ |
(CCA)n |
Simple_repeat |
| scaffold46738 |
266603 |
266629 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
266630 |
266670 |
+ |
(AATA)n |
Simple_repeat |
| scaffold46738 |
267682 |
267913 |
- |
RS18 |
Unspecified |
| scaffold46738 |
268137 |
268547 |
+ |
RS6485 |
Unspecified |
| scaffold46738 |
268621 |
268800 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold46738 |
268771 |
268800 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold46738 |
268804 |
269064 |
+ |
RS5513 |
Unspecified |
| scaffold46738 |
270857 |
270904 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
276229 |
276337 |
+ |
RS1847 |
Unspecified |
| scaffold46738 |
280121 |
280188 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
281979 |
282049 |
+ |
(ACCAA)n |
Simple_repeat |
| scaffold46738 |
282479 |
282583 |
+ |
G-rich |
Low_complexity |
| scaffold46738 |
283520 |
284376 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold46738 |
285066 |
285123 |
+ |
(AATT)n |
Simple_repeat |
| scaffold46738 |
285228 |
285357 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
285352 |
285502 |
- |
RS6609 |
Unspecified |
| scaffold46738 |
285601 |
285623 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold46738 |
285953 |
286171 |
- |
RS18 |
Unspecified |
| scaffold46738 |
286341 |
286362 |
+ |
(GAT)n |
Simple_repeat |
| scaffold46738 |
286510 |
286548 |
+ |
(CTTTC)n |
Simple_repeat |
| scaffold46738 |
286536 |
286617 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold46738 |
287013 |
287080 |
+ |
RS17541 |
Unspecified |
| scaffold46738 |
290194 |
290275 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold46738 |
294939 |
295014 |
+ |
HAT-N8_Mad |
DNA/hAT-Tag1 |
| scaffold46738 |
295045 |
295269 |
+ |
RS1535 |
Unspecified |
| scaffold46738 |
297011 |
297061 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold46738 |
297103 |
297184 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold46738 |
297778 |
297819 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
298106 |
298122 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
303583 |
303606 |
+ |
(CAA)n |
Simple_repeat |
| scaffold46738 |
303735 |
303769 |
+ |
(TCA)n |
Simple_repeat |
| scaffold46738 |
304558 |
304605 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
304804 |
304835 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold46738 |
304955 |
305001 |
- |
RS16392 |
Unspecified |
| scaffold46738 |
304962 |
305046 |
- |
RS29 |
Unspecified |
| scaffold46738 |
305536 |
305599 |
+ |
(TTTGTG)n |
Simple_repeat |
| scaffold46738 |
307865 |
307905 |
+ |
(TGATGA)n |
Simple_repeat |
| scaffold46738 |
313488 |
313535 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold46738 |
315684 |
315723 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
316038 |
316055 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
316449 |
316687 |
+ |
RS1180 |
Unspecified |
| scaffold46738 |
317235 |
317287 |
+ |
(TAATAG)n |
Simple_repeat |
| scaffold46738 |
317540 |
317593 |
+ |
(ATA)n |
Simple_repeat |
| scaffold46738 |
317969 |
318019 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold46738 |
318545 |
318608 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold46738 |
318906 |
318942 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold46738 |
319129 |
319200 |
+ |
(AATATTT)n |
Simple_repeat |
| scaffold46738 |
319394 |
319441 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold46738 |
319780 |
319818 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold46738 |
319845 |
319875 |
+ |
(AAAACA)n |
Simple_repeat |
| scaffold46738 |
320429 |
320467 |
+ |
(TAAATTG)n |
Simple_repeat |
| scaffold46738 |
321768 |
321954 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold46738 |
322120 |
322184 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
322289 |
322322 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold46738 |
323198 |
323306 |
- |
RS4475 |
Unspecified |
| scaffold46738 |
323204 |
323298 |
+ |
RS16382 |
Unspecified |
| scaffold46738 |
326456 |
326496 |
+ |
(TGATGA)n |
Simple_repeat |
| scaffold46738 |
332077 |
332124 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold46738 |
333458 |
333658 |
- |
RS5 |
Unspecified |
| scaffold46738 |
333657 |
333734 |
- |
RS5 |
Unspecified |
| scaffold46738 |
334503 |
334542 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
334857 |
334873 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
335267 |
335505 |
+ |
RS1180 |
Unspecified |
| scaffold46738 |
336053 |
336105 |
+ |
(TAATAG)n |
Simple_repeat |
| scaffold46738 |
336358 |
336411 |
+ |
(ATA)n |
Simple_repeat |
| scaffold46738 |
336787 |
336837 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold46738 |
337363 |
337426 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold46738 |
337724 |
337760 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold46738 |
337947 |
337986 |
+ |
(AATATTT)n |
Simple_repeat |
| scaffold46738 |
338268 |
338372 |
- |
PL142 |
Unspecified |
| scaffold46738 |
338657 |
338695 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold46738 |
338722 |
338752 |
+ |
(AAAACA)n |
Simple_repeat |
| scaffold46738 |
339306 |
339344 |
+ |
(TAAATTG)n |
Simple_repeat |
| scaffold46738 |
340645 |
340831 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold46738 |
340997 |
341059 |
+ |
GA-rich |
Low_complexity |
| scaffold46738 |
341167 |
341200 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold46738 |
342077 |
342185 |
- |
RS4475 |
Unspecified |
| scaffold46738 |
342083 |
342177 |
+ |
RS16382 |
Unspecified |
| scaffold46738 |
344726 |
344749 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
344927 |
344983 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
345460 |
345715 |
- |
RS1 |
Unspecified |
| scaffold46738 |
345806 |
345822 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
346201 |
346269 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold46738 |
346289 |
346316 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
346317 |
346347 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
346363 |
346433 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
346438 |
346479 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold46738 |
346481 |
346559 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold46738 |
346613 |
347240 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
346613 |
346705 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
346677 |
347267 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
347222 |
347267 |
+ |
(TAA)n |
Simple_repeat |
| scaffold46738 |
347296 |
347329 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold46738 |
347360 |
347394 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
347434 |
347482 |
+ |
(AATA)n |
Simple_repeat |
| scaffold46738 |
347850 |
347919 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold46738 |
348101 |
348159 |
+ |
(TGTTTGA)n |
Simple_repeat |
| scaffold46738 |
351472 |
351510 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold46738 |
355095 |
355242 |
- |
RS17843 |
Unspecified |
| scaffold46738 |
355249 |
355305 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold46738 |
355736 |
355785 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
355871 |
355928 |
+ |
Gypsy69-ZM_I-int |
LTR/Gypsy |
| scaffold46738 |
355971 |
355992 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
356441 |
356545 |
+ |
RS285 |
Unspecified |
| scaffold46738 |
357403 |
357466 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
358001 |
358343 |
- |
RS184 |
Unspecified |
| scaffold46738 |
358605 |
358909 |
- |
RS16888 |
Unspecified |
| scaffold46738 |
358994 |
359257 |
- |
RS771 |
Unspecified |
| scaffold46738 |
359368 |
359421 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold46738 |
359509 |
360056 |
- |
PL753 |
Unspecified |
| scaffold46738 |
360106 |
360148 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
360357 |
360401 |
- |
RS18371 |
Unspecified |
| scaffold46738 |
360637 |
360708 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
360795 |
360813 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
361439 |
361464 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold46738 |
361505 |
361541 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
361801 |
361852 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold46738 |
363050 |
363098 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
366017 |
366034 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
366125 |
366182 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold46738 |
366226 |
366259 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold46738 |
366833 |
366858 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
367243 |
367262 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
367794 |
367858 |
+ |
(CCA)n |
Simple_repeat |
| scaffold46738 |
367973 |
368023 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold46738 |
369656 |
369690 |
+ |
(ATTATC)n |
Simple_repeat |
| scaffold46738 |
370350 |
370538 |
+ |
RS5254 |
Unspecified |
| scaffold46738 |
370747 |
370813 |
+ |
(AGTAG)n |
Simple_repeat |
| scaffold46738 |
371535 |
371569 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
371662 |
371732 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold46738 |
371741 |
371776 |
+ |
(GATTA)n |
Simple_repeat |
| scaffold46738 |
372828 |
372880 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold46738 |
372833 |
372943 |
+ |
RAM13_I_MT-int |
LTR |
| scaffold46738 |
372881 |
372924 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold46738 |
372993 |
373148 |
- |
RS1478 |
Unspecified |
| scaffold46738 |
373236 |
373321 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
373339 |
373399 |
+ |
(ACC)n |
Simple_repeat |
| scaffold46738 |
373375 |
373496 |
+ |
(CCG)n |
Simple_repeat |
| scaffold46738 |
373495 |
373751 |
- |
RS4522 |
Unspecified |
| scaffold46738 |
373594 |
373834 |
- |
RS4644 |
Unspecified |
| scaffold46738 |
373965 |
374072 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold46738 |
373965 |
374207 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold46738 |
374054 |
374207 |
- |
RS15876 |
Unspecified |
| scaffold46738 |
374529 |
374567 |
+ |
(A)n |
Simple_repeat |
| scaffold46738 |
375260 |
375326 |
+ |
(AGTAG)n |
Simple_repeat |
| scaffold46738 |
376048 |
376082 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
376325 |
376369 |
+ |
(TTCCTTA)n |
Simple_repeat |
| scaffold46738 |
377682 |
377727 |
+ |
(TAT)n |
Simple_repeat |
| scaffold46738 |
378106 |
378182 |
+ |
RS93 |
Unspecified |
| scaffold46738 |
378433 |
378480 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
380318 |
380341 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
380342 |
380348 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold46738 |
380844 |
380879 |
+ |
(TTA)n |
Simple_repeat |
| scaffold46738 |
381498 |
381599 |
- |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold46738 |
382516 |
382576 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
382730 |
382783 |
+ |
A-rich |
Low_complexity |
| scaffold46738 |
384707 |
384732 |
+ |
(T)n |
Simple_repeat |
| scaffold46738 |
385337 |
385386 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold46738 |
388964 |
389007 |
+ |
(ATT)n |
Simple_repeat |
| scaffold46738 |
389115 |
389143 |
+ |
(AAT)n |
Simple_repeat |
| scaffold46738 |
389354 |
389383 |
+ |
(GAATT)n |
Simple_repeat |
| scaffold46738 |
390009 |
390447 |
- |
PL637 |
Unspecified |
| scaffold46738 |
390676 |
390741 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold46738 |
391247 |
391590 |
- |
PL613 |
Unspecified |