scaffold4772 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4772 |
8 |
738 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold4772 |
1111 |
2749 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold4772 |
2747 |
2863 |
- |
RS5153 |
Unspecified |
| scaffold4772 |
4295 |
4339 |
+ |
(TTTGTC)n |
Simple_repeat |
| scaffold4772 |
7193 |
7242 |
- |
PL517 |
Unspecified |
| scaffold4772 |
7773 |
7837 |
- |
RS133 |
Unspecified |
| scaffold4772 |
8124 |
8163 |
+ |
(CAC)n |
Simple_repeat |
| scaffold4772 |
8233 |
8295 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold4772 |
9314 |
9343 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
11399 |
11435 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
13097 |
13122 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
15686 |
15950 |
+ |
RS106 |
Unspecified |
| scaffold4772 |
17499 |
17519 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
18141 |
18202 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
18632 |
18651 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4772 |
18652 |
18725 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold4772 |
18726 |
18899 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4772 |
18994 |
19042 |
- |
PL517 |
Unspecified |
| scaffold4772 |
19559 |
19617 |
+ |
GA-rich |
Low_complexity |
| scaffold4772 |
20483 |
20541 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4772 |
31913 |
31951 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4772 |
31980 |
32015 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4772 |
32590 |
32655 |
+ |
(GGC)n |
Simple_repeat |
| scaffold4772 |
32730 |
32826 |
+ |
(CCACCGC)n |
Simple_repeat |
| scaffold4772 |
33161 |
33195 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4772 |
33233 |
33266 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
33502 |
33944 |
+ |
RS9731 |
Unspecified |
| scaffold4772 |
34614 |
34949 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4772 |
36789 |
37069 |
+ |
(ACTTAT)n |
Simple_repeat |
| scaffold4772 |
37000 |
37069 |
+ |
(ACTTAT)n |
Simple_repeat |
| scaffold4772 |
37278 |
37458 |
- |
PL80 |
Unspecified |
| scaffold4772 |
37469 |
38131 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4772 |
37497 |
38005 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold4772 |
38158 |
38191 |
+ |
(ACC)n |
Simple_repeat |
| scaffold4772 |
38248 |
38295 |
+ |
(ACC)n |
Simple_repeat |
| scaffold4772 |
38703 |
38738 |
+ |
(AATT)n |
Simple_repeat |
| scaffold4772 |
38806 |
38856 |
+ |
(ATTTG)n |
Simple_repeat |
| scaffold4772 |
38956 |
39103 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold4772 |
39281 |
40765 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold4772 |
41163 |
41213 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
41302 |
41337 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold4772 |
42226 |
42758 |
+ |
PL880 |
Unspecified |
| scaffold4772 |
43564 |
44015 |
+ |
RS1633 |
Unspecified |
| scaffold4772 |
43897 |
44122 |
+ |
RS6781 |
Unspecified |
| scaffold4772 |
44937 |
45376 |
- |
RS5034 |
Unspecified |
| scaffold4772 |
45630 |
45663 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold4772 |
45899 |
45940 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold4772 |
45993 |
46224 |
- |
PL83 |
Unspecified |
| scaffold4772 |
46371 |
46416 |
+ |
(CTTTCGA)n |
Simple_repeat |
| scaffold4772 |
46671 |
46710 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
46937 |
46999 |
+ |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold4772 |
48264 |
48595 |
- |
Copia-67_GM-I |
LTR/Copia |
| scaffold4772 |
50108 |
50167 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold4772 |
50226 |
50354 |
- |
RS5880 |
Unspecified |
| scaffold4772 |
50478 |
50513 |
+ |
(TA)n |
Simple_repeat |
| scaffold4772 |
50821 |
50867 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
54702 |
54726 |
+ |
(AT)n |
Simple_repeat |
| scaffold4772 |
54958 |
55188 |
- |
RS376 |
Unspecified |
| scaffold4772 |
56035 |
56075 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold4772 |
56336 |
56419 |
+ |
(TATTAC)n |
Simple_repeat |
| scaffold4772 |
56416 |
57155 |
- |
RS319 |
Unspecified |
| scaffold4772 |
57671 |
57785 |
- |
RS319 |
Unspecified |
| scaffold4772 |
57785 |
58757 |
- |
RS398 |
Unspecified |
| scaffold4772 |
62547 |
62676 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
63612 |
64591 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4772 |
64856 |
66412 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold4772 |
64856 |
66498 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold4772 |
64865 |
65099 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4772 |
65552 |
66411 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold4772 |
65552 |
66498 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold4772 |
66346 |
66498 |
- |
PL887 |
Unspecified |
| scaffold4772 |
66502 |
66549 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
66627 |
66676 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
66627 |
67686 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
66668 |
67686 |
+ |
RS402 |
Unspecified |
| scaffold4772 |
67684 |
67959 |
+ |
RS126 |
Unspecified |
| scaffold4772 |
71790 |
71837 |
+ |
(TAACAAT)n |
Simple_repeat |
| scaffold4772 |
72905 |
72951 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
73035 |
73061 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
74384 |
74438 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold4772 |
74437 |
74693 |
+ |
RS1 |
Unspecified |
| scaffold4772 |
74692 |
74819 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4772 |
79264 |
79300 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
81491 |
81509 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
81523 |
81559 |
+ |
(TTATACA)n |
Simple_repeat |
| scaffold4772 |
81608 |
81664 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
82601 |
82670 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
82719 |
82759 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4772 |
82760 |
82994 |
- |
RS11936 |
Unspecified |
| scaffold4772 |
82943 |
83191 |
- |
RS3355 |
Unspecified |
| scaffold4772 |
83587 |
84027 |
+ |
RS458 |
Unspecified |
| scaffold4772 |
85084 |
85126 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
86013 |
86226 |
- |
RS12703 |
Unspecified |
| scaffold4772 |
88925 |
89173 |
- |
RS1092 |
Unspecified |
| scaffold4772 |
93077 |
93191 |
+ |
RS15119 |
Unspecified |
| scaffold4772 |
93437 |
93471 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
93595 |
93644 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
93710 |
93917 |
+ |
RS17279 |
Unspecified |
| scaffold4772 |
93924 |
94065 |
+ |
RS15635 |
Unspecified |
| scaffold4772 |
94900 |
94944 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4772 |
94953 |
95026 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4772 |
95539 |
95569 |
+ |
(TAAAT)n |
Simple_repeat |
| scaffold4772 |
96574 |
96668 |
- |
RS16382 |
Unspecified |
| scaffold4772 |
97161 |
97220 |
- |
PL690 |
Unspecified |
| scaffold4772 |
97168 |
97379 |
+ |
RS677 |
Unspecified |
| scaffold4772 |
97379 |
97456 |
+ |
RS677 |
Unspecified |
| scaffold4772 |
97540 |
97647 |
- |
RS10270 |
Unspecified |
| scaffold4772 |
97755 |
97900 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold4772 |
98393 |
98592 |
- |
RS4 |
Unspecified |
| scaffold4772 |
98640 |
98764 |
- |
RS4 |
Unspecified |
| scaffold4772 |
99216 |
99417 |
+ |
RS2037 |
Unspecified |
| scaffold4772 |
99494 |
99553 |
+ |
RS1854 |
Unspecified |
| scaffold4772 |
99509 |
99565 |
- |
RS18371 |
Unspecified |
| scaffold4772 |
99770 |
99790 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
99956 |
99997 |
+ |
(ACATCTT)n |
Simple_repeat |
| scaffold4772 |
100058 |
100198 |
- |
RS10811 |
Unspecified |
| scaffold4772 |
100298 |
100343 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4772 |
100476 |
100593 |
- |
RS3193 |
Unspecified |
| scaffold4772 |
101284 |
101300 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
101423 |
101447 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
102183 |
102416 |
- |
PL271 |
Unspecified |
| scaffold4772 |
102667 |
102802 |
+ |
RS14624 |
Unspecified |
| scaffold4772 |
102829 |
102936 |
- |
RS10270 |
Unspecified |
| scaffold4772 |
102961 |
102977 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
107128 |
107159 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
107295 |
107312 |
+ |
(A)n |
Simple_repeat |
| scaffold4772 |
110574 |
110599 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold4772 |
110793 |
111015 |
+ |
RS4 |
Unspecified |
| scaffold4772 |
111716 |
111831 |
- |
PL533 |
Unspecified |
| scaffold4772 |
114359 |
114410 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
117522 |
117572 |
- |
Copia3_HV-int |
LTR/Copia |
| scaffold4772 |
119464 |
119486 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
121646 |
121688 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
122964 |
123013 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold4772 |
123220 |
123255 |
+ |
(AAATTG)n |
Simple_repeat |
| scaffold4772 |
123549 |
123650 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4772 |
124499 |
124532 |
+ |
A-rich |
Low_complexity |
| scaffold4772 |
124570 |
124597 |
+ |
(CAA)n |
Simple_repeat |
| scaffold4772 |
124598 |
124605 |
+ |
(CACCAT)n |
Simple_repeat |
| scaffold4772 |
124606 |
124675 |
+ |
(CAC)n |
Simple_repeat |
| scaffold4772 |
124676 |
124689 |
+ |
(CACCAT)n |
Simple_repeat |
| scaffold4772 |
125445 |
125505 |
+ |
(TAATTGT)n |
Simple_repeat |
| scaffold4772 |
127155 |
127197 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold4772 |
127155 |
127610 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold4772 |
127192 |
127610 |
+ |
RS2240 |
Unspecified |
| scaffold4772 |
130188 |
130214 |
+ |
(T)n |
Simple_repeat |
| scaffold4772 |
130965 |
130995 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold4772 |
132870 |
133035 |
+ |
RS11867 |
Unspecified |
| scaffold4772 |
133638 |
133705 |
+ |
G-rich |
Low_complexity |
| scaffold4772 |
133745 |
133914 |
+ |
RS2005 |
Unspecified |
| scaffold4772 |
134243 |
134304 |
+ |
(GGTGAT)n |
Simple_repeat |