scaffold4828 Repeat List
genome start end strand repeat-name repeat-class
scaffold4828 111 152 + (GAA)n Simple_repeat
scaffold4828 151 891 + PL475 Unspecified
scaffold4828 1079 1503 + (AAT)n Simple_repeat
scaffold4828 1439 1503 + (AAT)n Simple_repeat
scaffold4828 2805 3150 - PL321 Unspecified
scaffold4828 4851 4890 - HAT-N10_Mad DNA/hAT-Ac
scaffold4828 5830 6080 - hAT-N5_Mad DNA/hAT-Ac
scaffold4828 6386 7024 - HAT-10_Mad DNA/hAT-Ac
scaffold4828 7081 7911 - hAT hAT(TransposonPSI)
scaffold4828 7129 7545 - HAT-9_Mad DNA/hAT-Ac
scaffold4828 8205 8269 + A-rich Low_complexity
scaffold4828 8785 8860 - HAT-N10_Mad DNA/hAT-Ac
scaffold4828 10501 10521 + (AAT)n Simple_repeat
scaffold4828 10522 10556 + (TAAA)n Simple_repeat
scaffold4828 11558 12364 + RS5921 Unspecified
scaffold4828 12336 12426 - RS4205 Unspecified
scaffold4828 13350 13380 + (ATT)n Simple_repeat
scaffold4828 13715 14103 + HAT-11_Mad DNA/hAT-Tip100
scaffold4828 14186 15896 + ZhAT5_ZM DNA/hAT-Tip100
scaffold4828 15961 16014 + (ATTAT)n Simple_repeat
scaffold4828 17456 17639 - RS18243 Unspecified
scaffold4828 17672 17783 + RS5921 Unspecified
scaffold4828 17760 18078 + (ATTAG)n Simple_repeat
scaffold4828 18047 18078 + (ATTAG)n Simple_repeat
scaffold4828 18230 18571 + RS11756 Unspecified
scaffold4828 18782 18865 + (ATAATTT)n Simple_repeat
scaffold4828 20063 20109 - EnSpm-2_STu DNA/CMC-EnSpm
scaffold4828 20245 20291 + (ATCCG)n Simple_repeat
scaffold4828 20302 20408 + hAT-17N1_ZM DNA/hAT-Ac
scaffold4828 20957 21005 + HAT-13_Mad DNA/hAT-Ac
scaffold4828 21115 21187 + RS5690 Unspecified
scaffold4828 21297 21532 + RS12045 Unspecified
scaffold4828 22049 22314 + (TTATAAT)n Simple_repeat
scaffold4828 22049 22165 + (TTATAAT)n Simple_repeat
scaffold4828 22140 22314 - PL859 Unspecified
scaffold4828 22156 22223 + A-rich Low_complexity
scaffold4828 22202 22364 - RS14472 Unspecified
scaffold4828 23135 23541 - RS1919 Unspecified
scaffold4828 23517 23962 + RS458 Unspecified
scaffold4828 23950 24331 + RS1188 Unspecified
scaffold4828 24335 24662 + RS925 Unspecified
scaffold4828 24659 24821 + RS458 Unspecified
scaffold4828 24812 25508 - PL730 Unspecified
scaffold4828 25516 25566 + (TTTTGA)n Simple_repeat
scaffold4828 25887 26828 + RS69 Unspecified
scaffold4828 26583 26880 + RS4686 Unspecified
scaffold4828 26754 26925 + PL143 Unspecified
scaffold4828 26985 27131 - RS191 Unspecified
scaffold4828 27300 27339 + A-rich Low_complexity
scaffold4828 27673 27704 + A-rich Low_complexity
scaffold4828 28559 28577 + (A)n Simple_repeat
scaffold4828 31053 31098 + (CAC)n Simple_repeat
scaffold4828 31174 31238 + (CAACCA)n Simple_repeat
scaffold4828 31541 31574 + (T)n Simple_repeat
scaffold4828 33193 33246 + Gypsy-66_SB-I LTR/Gypsy
scaffold4828 35063 35096 + (CTTT)n Simple_repeat
scaffold4828 40259 40278 + (A)n Simple_repeat
scaffold4828 40566 40604 + A-rich Low_complexity
scaffold4828 40605 40622 + GA-rich Low_complexity
scaffold4828 40687 40721 + (GGCCC)n Simple_repeat
scaffold4828 41062 41080 + (A)n Simple_repeat
scaffold4828 41367 41429 + GA-rich Low_complexity
scaffold4828 41526 41770 - PL782 Unspecified
scaffold4828 41765 41997 + RS15131 Unspecified
scaffold4828 42019 42318 - PL782 Unspecified
scaffold4828 43930 44055 - PL368 Unspecified
scaffold4828 44299 44325 + (TTG)n Simple_repeat
scaffold4828 44365 44522 + (TTG)n Simple_repeat
scaffold4828 44886 44920 + (TTG)n Simple_repeat
scaffold4828 45262 45556 + RS13089 Unspecified
scaffold4828 45741 45858 + RS9940 Unspecified
scaffold4828 46147 46290 + RS9081 Unspecified
scaffold4828 46541 46798 + RS13339 Unspecified
scaffold4828 46809 47218 + RS12981 Unspecified
scaffold4828 47574 47612 + (TGT)n Simple_repeat
scaffold4828 47671 47754 + (GTTGTCC)n Simple_repeat
scaffold4828 47808 48128 + PL647 Unspecified
scaffold4828 48400 48496 + (T)n Simple_repeat
scaffold4828 48471 48496 + (T)n Simple_repeat
scaffold4828 48680 48739 + A-rich Low_complexity
scaffold4828 48766 49167 - Gypsy-47_STu-I LTR/Gypsy
scaffold4828 50251 51926 - MEGY-I_MT LTR/Gypsy
scaffold4828 51929 52605 - MEGY-I_MT LTR/Gypsy
scaffold4828 52767 52816 + A-rich Low_complexity
scaffold4828 53552 53609 + (CTCTA)n Simple_repeat
scaffold4828 53995 54209 - MEGY-I_MT LTR/Gypsy
scaffold4828 54418 55077 - MEGY-I_MT LTR/Gypsy
scaffold4828 56049 56211 - PIGY-LTR_PS LTR/Gypsy
scaffold4828 57954 58116 - GYPSHAN_I_MT-int LTR/Gypsy
scaffold4828 58857 58897 - GYPSHAN_I_MT-int LTR/Gypsy
scaffold4828 58899 60238 - PL595 Unspecified
scaffold4828 60884 60945 + A-rich Low_complexity
scaffold4828 61912 61952 + (GTA)n Simple_repeat
scaffold4828 62926 63027 + (TA)n Simple_repeat
scaffold4828 63516 63820 + Gypsy22-ZM_I-int LTR/Gypsy
scaffold4828 63516 63690 + Gypsy22-ZM_I-int LTR/Gypsy
scaffold4828 63647 63820 - RS3768 Unspecified
scaffold4828 64283 64522 - cacta cacta(TransposonPSI)
scaffold4828 64794 64844 + (ATTTTAA)n Simple_repeat
scaffold4828 65067 65102 + (T)n Simple_repeat
scaffold4828 65149 65186 + (ATATTTA)n Simple_repeat
scaffold4828 66256 66282 + (T)n Simple_repeat
scaffold4828 66615 66733 + RS16441 Unspecified
scaffold4828 66743 67279 + Gypsy22-ZM_I-int LTR/Gypsy
scaffold4828 67497 67615 + RS16441 Unspecified
scaffold4828 67810 67921 + RS16441 Unspecified
scaffold4828 68554 68584 + GA-rich Low_complexity
scaffold4828 68724 68898 + RS648 Unspecified
scaffold4828 68891 69188 + RS9860 Unspecified
scaffold4828 71557 71610 + (ATATAA)n Simple_repeat
scaffold4828 71897 71920 + (A)n Simple_repeat
scaffold4828 71921 71926 + (TAAAA)n Simple_repeat
scaffold4828 72890 72928 + (TATT)n Simple_repeat
scaffold4828 73661 73822 + RS172 Unspecified
scaffold4828 73862 73896 + (ATTAGA)n Simple_repeat
scaffold4828 74683 75033 + RS8033 Unspecified
scaffold4828 74847 75063 + RS9920 Unspecified
scaffold4828 76090 76668 + PL732 Unspecified
scaffold4828 76776 76804 + (T)n Simple_repeat
scaffold4828 79125 79420 + RS2725 Unspecified
scaffold4828 80515 80565 + GA-rich Low_complexity
scaffold4828 80680 80742 + (GTG)n Simple_repeat
scaffold4828 81693 81756 + RTE-1_SBi LINE/RTE-BovB
scaffold4828 82100 82281 + RS12866 Unspecified
scaffold4828 83851 84407 - RS265 Unspecified
scaffold4828 84442 84585 - PL367 Unspecified
scaffold4828 85959 85988 + (ATCTA)n Simple_repeat
scaffold4828 85991 86176 - RS3756 Unspecified
scaffold4828 86287 86606 + PL504 Unspecified
scaffold4828 86607 86901 + RS565 Unspecified
scaffold4828 87436 87456 + (T)n Simple_repeat
scaffold4828 87816 87848 + (ATTTC)n Simple_repeat
scaffold4828 88099 88159 + (TTTTA)n Simple_repeat
scaffold4828 88356 88383 + (T)n Simple_repeat
scaffold4828 88515 88562 + (TTTTTAT)n Simple_repeat
scaffold4828 88597 88618 + (A)n Simple_repeat
scaffold4828 90419 90645 + RS17834 Unspecified
scaffold4828 92773 92850 + BvL1-2 LINE/L1
scaffold4828 93414 94553 + LINE LINE(TransposonPSI)
scaffold4828 93603 94474 + SHALINE10_MT LINE/L1
scaffold4828 96387 96586 + RS2213 Unspecified
scaffold4828 96587 96930 + RS1963 Unspecified
scaffold4828 97083 97298 - RS4791 Unspecified
scaffold4828 97834 97905 + (TGTTTA)n Simple_repeat
scaffold4828 98177 98228 + (AATAATT)n Simple_repeat
scaffold4828 98649 98727 - Gypsy-72-LTR_ZM LTR/Gypsy
scaffold4828 98728 98806 - COP14_I_MT-int LTR/Copia
scaffold4828 98807 98851 - Gypsy-72-LTR_ZM LTR/Gypsy
scaffold4828 98930 100639 - RS2 Unspecified
scaffold4828 100635 100680 - RS2213 Unspecified
scaffold4828 100642 100680 + RS2213 Unspecified
scaffold4828 100651 100690 + RS2213 Unspecified
scaffold4828 100745 100812 - RS2213 Unspecified
scaffold4828 100891 100964 + EnSpm2_PTr DNA/CMC-EnSpm
scaffold4828 101016 101698 + RS1032 Unspecified
scaffold4828 101790 101833 + (TTG)n Simple_repeat
scaffold4828 102560 102816 + RS26 Unspecified
scaffold4828 104404 104449 + A-rich Low_complexity
scaffold4828 105499 105598 + (TCAT)n Simple_repeat
scaffold4828 106726 106822 - hAT-3_STu DNA/hAT-Tag1
scaffold4828 106949 107179 + RS4645 Unspecified
scaffold4828 107522 107599 + (ATTTTTT)n Simple_repeat
scaffold4828 107937 108018 + (TCTTCA)n Simple_repeat
scaffold4828 108043 108215 + RS15534 Unspecified
scaffold4828 108455 108562 + (CAGCT)n Simple_repeat
scaffold4828 108744 108796 + (ATG)n Simple_repeat
scaffold4828 109550 110147 - Mariner_MT DNA/TcMar-Stowaway
scaffold4828 110476 110519 + (CCGG)n Simple_repeat
scaffold4828 110618 110625 + (TTTAG)n Simple_repeat
scaffold4828 110626 110659 + (TTTAGG)n Simple_repeat
scaffold4828 110660 110668 + (TTTAG)n Simple_repeat
scaffold4828 110888 110957 + (TGAT)n Simple_repeat
scaffold4828 111218 111272 + (TTTTAG)n Simple_repeat
scaffold4828 111421 111450 + MEGY-I_MT LTR/Gypsy
scaffold4828 112585 112790 + RS3403 Unspecified
scaffold4828 112924 113147 + RS535 Unspecified
scaffold4828 117040 117578 + MEGY-I_MT LTR/Gypsy
scaffold4828 118500 118545 + Gypsy-10_Mad-I LTR/Gypsy
scaffold4828 118599 118857 - PL755 Unspecified
scaffold4828 118658 118863 - PL491 Unspecified
scaffold4828 120137 120644 - PL150 Unspecified
scaffold4828 120909 120951 + Gypsy-10_Mad-I LTR/Gypsy
scaffold4828 121728 121761 + (A)n Simple_repeat
scaffold4828 122303 122357 + Athila8A_I-int LTR/Gypsy
scaffold4828 122791 122814 + (TTTTTAG)n Simple_repeat
scaffold4828 122815 122850 + (TTTAG)n Simple_repeat
scaffold4828 123070 123139 + (TGAT)n Simple_repeat
scaffold4828 123404 123453 + (TTTAG)n Simple_repeat
scaffold4828 124060 124378 + PL6 Unspecified
scaffold4828 125080 125096 + (T)n Simple_repeat
scaffold4828 125261 125291 + (AATAC)n Simple_repeat
scaffold4828 126832 126870 + (TTTATT)n Simple_repeat
scaffold4828 127070 127488 + PL3 Unspecified
scaffold4828 129014 129182 - COP3_I_MT-int LTR/Copia
scaffold4828 131346 131373 + GA-rich Low_complexity
scaffold4828 132210 132252 + (T)n Simple_repeat
scaffold4828 132356 132582 - RS7166 Unspecified
scaffold4828 133571 133627 + A-rich Low_complexity
scaffold4828 133637 133664 + (A)n Simple_repeat
scaffold4828 133949 133987 + GA-rich Low_complexity
scaffold4828 135055 135467 + RS4219 Unspecified
scaffold4828 135761 135835 + (TTA)n Simple_repeat
scaffold4828 136162 136214 + A-rich Low_complexity
scaffold4828 136682 136732 + RS4219 Unspecified
scaffold4828 137158 137177 + MuDR-11_GM DNA/MULE-MuDR
scaffold4828 137178 137248 - MuDR-3_SBi DNA/MULE-MuDR
scaffold4828 137249 137338 + MuDR-11_GM DNA/MULE-MuDR
scaffold4828 137527 137548 + (A)n Simple_repeat
scaffold4828 138990 139875 - L1-1_GM LINE/L1
scaffold4828 140079 140150 - L1-2_GM LINE/L1
scaffold4828 140574 140791 - L1-15_GM LINE/L1
scaffold4828 142478 142519 + (AAGTTTAT)n Simple_repeat
scaffold4828 144134 144379 - RS777 Unspecified
scaffold4828 145402 145432 + (A)n Simple_repeat
scaffold4828 148633 148665 + (A)n Simple_repeat
scaffold4828 150219 150336 + TRAMET1 DNA/TcMar-Stowaway
scaffold4828 151670 151961 + Helitron5 RC/Helitron
scaffold4828 151988 152030 + (TTTTTACAT)n Simple_repeat
scaffold4828 152057 152124 + (AATTAA)n Simple_repeat
scaffold4828 152321 152380 + A-rich Low_complexity
scaffold4828 154026 154046 + (T)n Simple_repeat
scaffold4828 154144 154180 + A-rich Low_complexity
scaffold4828 154551 154589 + (T)n Simple_repeat
scaffold4828 155715 155787 + EnSpm-N1_TA DNA/CMC-EnSpm
scaffold4828 156764 156789 + (GCCG)n Simple_repeat
scaffold4828 156935 156969 + (AACTTC)n Simple_repeat
scaffold4828 158090 158162 + EnSpm-N1_TA DNA/CMC-EnSpm
scaffold4828 158479 158594 - TA11 LINE/L1
scaffold4828 158940 159843 - SHALINE10_MT LINE/L1
scaffold4828 162785 163939 + PL568 Unspecified
scaffold4828 163940 164147 + RS5295 Unspecified
scaffold4828 168791 168921 + MEGY-I_MT LTR/Gypsy
scaffold4828 169290 169875 - RS5034 Unspecified
scaffold4828 169945 170083 + Athila6B_I-int LTR/Gypsy
scaffold4828 170555 170622 + A-rich Low_complexity
scaffold4828 170850 171198 + PL568 Unspecified
scaffold4828 171575 171612 + (CCGG)n Simple_repeat
scaffold4828 171694 171738 + (TTAGTT)n Simple_repeat
scaffold4828 171717 171756 + (TTTCAGT)n Simple_repeat
scaffold4828 172705 173210 + PL880 Unspecified
scaffold4828 173400 173521 + MEGY-I_MT LTR/Gypsy
scaffold4828 174025 174489 + RS1633 Unspecified
scaffold4828 174357 175100 + MEGY-I_MT LTR/Gypsy
scaffold4828 174535 175100 + MEGY-I_MT LTR/Gypsy
scaffold4828 175444 176029 - RS5034 Unspecified
scaffold4828 176099 176409 + Athila6B_I-int LTR/Gypsy
scaffold4828 176099 176237 + Athila6B_I-int LTR/Gypsy
scaffold4828 176184 176409 + PL527 Unspecified
scaffold4828 180599 180663 + (TGTA)n Simple_repeat
scaffold4828 181823 181862 + (TTTGT)n Simple_repeat
scaffold4828 182792 183933 - RS3063 Unspecified
scaffold4828 183347 184161 - PL921 Unspecified
scaffold4828 183701 185140 - PL554 Unspecified
scaffold4828 185286 185328 + (TTTGT)n Simple_repeat
scaffold4828 185576 185632 - Gypsy-LTR_MT LTR/Gypsy
scaffold4828 185757 186838 - GYPSY3-I_MT LTR/Gypsy
scaffold4828 187117 188923 - Gypsy-I_MT LTR/Gypsy
scaffold4828 189098 189111 + (ATGTGTT)n Simple_repeat
scaffold4828 189112 189172 + (TTTG)n Simple_repeat
scaffold4828 193107 193211 + PL111 Unspecified
scaffold4828 193123 194120 + PL647 Unspecified
scaffold4828 194307 196214 + (TGCTGT)n Simple_repeat
scaffold4828 196164 196214 + (TGCTGT)n Simple_repeat
scaffold4828 196249 196601 + (GTGCTT)n Simple_repeat
scaffold4828 196249 196318 + (GTGCTT)n Simple_repeat
scaffold4828 196308 196601 - RS1300 Unspecified
scaffold4828 196665 196998 + RS1064 Unspecified
scaffold4828 198857 199620 + PL746 Unspecified
scaffold4828 199620 200383 - RS2725 Unspecified
scaffold4828 199620 200727 - RS934 Unspecified
scaffold4828 199781 200727 + RS1941 Unspecified
scaffold4828 201481 203050 + RS51 Unspecified
scaffold4828 203442 203560 + RS21 Unspecified
scaffold4828 204929 205171 + RS3371 Unspecified
scaffold4828 205689 205771 + (TGTTGC)n Simple_repeat
scaffold4828 206658 206682 + (AT)n Simple_repeat
scaffold4828 207916 207984 + (TTAA)n Simple_repeat
scaffold4828 208660 208678 + (TA)n Simple_repeat
scaffold4828 208679 208705 + (AG)n Simple_repeat
scaffold4828 209902 210103 + (GGT)n Simple_repeat
scaffold4828 210135 210192 + GA-rich Low_complexity
scaffold4828 210201 210244 - Gypsy-1_CP-LTR LTR/Gypsy
scaffold4828 210602 210624 + (T)n Simple_repeat
scaffold4828 211104 211177 + (TTCAT)n Simple_repeat
scaffold4828 212407 212443 + (TTCAATT)n Simple_repeat
scaffold4828 212690 212929 + RS9113 Unspecified
scaffold4828 213125 213268 + (CATTT)n Simple_repeat
scaffold4828 213896 213964 + (GAATAT)n Simple_repeat
scaffold4828 214323 214342 + (TA)n Simple_repeat
scaffold4828 214589 214889 + RS1459 Unspecified
scaffold4828 215165 215262 + (CAC)n Simple_repeat
scaffold4828 215574 215610 + (AGA)n Simple_repeat
scaffold4828 215741 215759 + (TGG)n Simple_repeat
scaffold4828 215943 215964 + (TA)n Simple_repeat
scaffold4828 216261 216282 + (TA)n Simple_repeat
scaffold4828 216896 217013 + COPI2_LTR LTR/Copia
scaffold4828 217826 220804 + gypsy gypsy(TransposonPSI)
scaffold4828 218963 219135 + Gret1_I-int LTR/Gypsy
scaffold4828 219421 220770 + Gypsy-38_Mad-I LTR/Gypsy
scaffold4828 220849 221181 + Gypsy-199_ZM-I LTR/Gypsy
scaffold4828 221346 222430 + Gypsy3-VV_I-int LTR/Gypsy
scaffold4828 222910 222931 + (A)n Simple_repeat
scaffold4828 222925 222998 + GA-rich Low_complexity
scaffold4828 223002 223088 + (CAC)n Simple_repeat
scaffold4828 223881 224077 + RS15769 Unspecified
scaffold4828 224155 224415 + RS109 Unspecified
scaffold4828 225557 225841 + RS1645 Unspecified
scaffold4828 225891 226047 + EnSpm-1_GM DNA/CMC-EnSpm
scaffold4828 226048 226148 - TPN1_IN DNA/CMC-EnSpm
scaffold4828 226149 226318 + EnSpm-1_GM DNA/CMC-EnSpm
scaffold4828 226632 226696 + (AGACAA)n Simple_repeat
scaffold4828 229445 229494 + A-rich Low_complexity
scaffold4828 229884 229908 + (AACAACA)n Simple_repeat
scaffold4828 229909 229954 + (AACA)n Simple_repeat