scaffold49466 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold49466 |
1 |
240 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold49466 |
4 |
536 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold49466 |
400 |
428 |
+ |
(T)n |
Simple_repeat |
| scaffold49466 |
2258 |
2311 |
- |
RS1337 |
Unspecified |
| scaffold49466 |
2261 |
2323 |
- |
PL819 |
Unspecified |
| scaffold49466 |
2487 |
2508 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
3768 |
3861 |
+ |
RS18358 |
Unspecified |
| scaffold49466 |
7085 |
7104 |
+ |
(T)n |
Simple_repeat |
| scaffold49466 |
10796 |
10917 |
- |
RS170 |
Unspecified |
| scaffold49466 |
11155 |
11183 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
11876 |
11938 |
+ |
RS6405 |
Unspecified |
| scaffold49466 |
12010 |
12070 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold49466 |
12101 |
12149 |
+ |
(TCGTTC)n |
Simple_repeat |
| scaffold49466 |
12442 |
12723 |
+ |
RS1716 |
Unspecified |
| scaffold49466 |
13148 |
13184 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
13467 |
13545 |
+ |
(TTC)n |
Simple_repeat |
| scaffold49466 |
13639 |
13724 |
+ |
Gypsy-8-I_CR |
LTR/Gypsy |
| scaffold49466 |
13770 |
13837 |
+ |
(TCA)n |
Simple_repeat |
| scaffold49466 |
14063 |
14124 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold49466 |
14366 |
14541 |
+ |
RS13450 |
Unspecified |
| scaffold49466 |
15511 |
15671 |
+ |
RS573 |
Unspecified |
| scaffold49466 |
15664 |
15760 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold49466 |
15765 |
15802 |
+ |
(TGT)n |
Simple_repeat |
| scaffold49466 |
17896 |
17931 |
+ |
(ACTCAGT)n |
Simple_repeat |
| scaffold49466 |
18975 |
19003 |
+ |
(GGTCAC)n |
Simple_repeat |
| scaffold49466 |
20686 |
20793 |
+ |
RS18316 |
Unspecified |
| scaffold49466 |
20687 |
20780 |
- |
RS4475 |
Unspecified |
| scaffold49466 |
20863 |
20893 |
- |
Copia-7_BRa-I |
LTR/Copia |
| scaffold49466 |
22031 |
22070 |
+ |
(TGAAT)n |
Simple_repeat |
| scaffold49466 |
22295 |
22322 |
+ |
(GTTTG)n |
Simple_repeat |
| scaffold49466 |
27811 |
27828 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
27862 |
27974 |
+ |
(CTT)n |
Simple_repeat |
| scaffold49466 |
28220 |
28259 |
+ |
(T)n |
Simple_repeat |
| scaffold49466 |
31592 |
31628 |
+ |
(TTTCTT)n |
Simple_repeat |
| scaffold49466 |
32008 |
32027 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
34231 |
34389 |
+ |
RS84 |
Unspecified |
| scaffold49466 |
34488 |
34534 |
+ |
RS278 |
Unspecified |
| scaffold49466 |
34535 |
34603 |
+ |
RS133 |
Unspecified |
| scaffold49466 |
34618 |
34928 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
34847 |
34928 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
34976 |
35010 |
+ |
(TCT)n |
Simple_repeat |
| scaffold49466 |
35020 |
35056 |
+ |
(TCAATTT)n |
Simple_repeat |
| scaffold49466 |
35320 |
35353 |
+ |
(AACCGC)n |
Simple_repeat |
| scaffold49466 |
35931 |
35955 |
+ |
(TGG)n |
Simple_repeat |
| scaffold49466 |
41395 |
41505 |
- |
RS3146 |
Unspecified |
| scaffold49466 |
41550 |
41604 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
43144 |
43252 |
+ |
RS4475 |
Unspecified |
| scaffold49466 |
44940 |
44996 |
+ |
(CAATTT)n |
Simple_repeat |
| scaffold49466 |
47569 |
47605 |
+ |
(TTCACA)n |
Simple_repeat |
| scaffold49466 |
52006 |
52040 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
56044 |
56210 |
- |
PL23 |
Unspecified |
| scaffold49466 |
57114 |
57168 |
+ |
(AAG)n |
Simple_repeat |
| scaffold49466 |
57316 |
57459 |
- |
RS12315 |
Unspecified |
| scaffold49466 |
57893 |
58030 |
- |
RS12315 |
Unspecified |
| scaffold49466 |
59003 |
59122 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold49466 |
59474 |
59538 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
59632 |
59852 |
+ |
RS4896 |
Unspecified |
| scaffold49466 |
60098 |
60297 |
- |
PL82 |
Unspecified |
| scaffold49466 |
60468 |
60493 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold49466 |
60871 |
60908 |
+ |
(TTG)n |
Simple_repeat |
| scaffold49466 |
61203 |
61260 |
+ |
(T)n |
Simple_repeat |
| scaffold49466 |
62536 |
62577 |
+ |
GA-rich |
Low_complexity |
| scaffold49466 |
65124 |
65147 |
+ |
(T)n |
Simple_repeat |
| scaffold49466 |
66507 |
66538 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
68476 |
68540 |
+ |
PL582 |
Unspecified |
| scaffold49466 |
68476 |
68533 |
+ |
RS25 |
Unspecified |
| scaffold49466 |
73344 |
73361 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
73917 |
73972 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
77605 |
77626 |
+ |
(A)n |
Simple_repeat |
| scaffold49466 |
80111 |
80246 |
+ |
PL114 |
Unspecified |
| scaffold49466 |
82401 |
82494 |
+ |
RS16382 |
Unspecified |
| scaffold49466 |
82566 |
82685 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold49466 |
83017 |
83114 |
- |
ATRAN |
DNA? |
| scaffold49466 |
83281 |
83385 |
- |
RS16382 |
Unspecified |
| scaffold49466 |
83433 |
83465 |
+ |
A-rich |
Low_complexity |
| scaffold49466 |
84587 |
84669 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold49466 |
85587 |
85619 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold49466 |
88552 |
88960 |
- |
RS956 |
Unspecified |
| scaffold49466 |
89401 |
89780 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold49466 |
91074 |
92148 |
- |
RS307 |
Unspecified |
| scaffold49466 |
94920 |
95328 |
- |
RS956 |
Unspecified |
| scaffold49466 |
95582 |
95727 |
- |
RS4826 |
Unspecified |
| scaffold49466 |
95728 |
95903 |
+ |
RS1375 |
Unspecified |
| scaffold49466 |
96006 |
96041 |
+ |
(TCACTT)n |
Simple_repeat |
| scaffold49466 |
96047 |
96075 |
+ |
(CACTCGA)n |
Simple_repeat |
| scaffold49466 |
96077 |
96188 |
+ |
(CAC)n |
Simple_repeat |
| scaffold49466 |
96265 |
96372 |
+ |
RS2266 |
Unspecified |