scaffold4949 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4949 |
713 |
740 |
+ |
A-rich |
Low_complexity |
| scaffold4949 |
766 |
1799 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold4949 |
2563 |
4009 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold4949 |
4633 |
4696 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold4949 |
5341 |
5373 |
+ |
(TA)n |
Simple_repeat |
| scaffold4949 |
5864 |
6764 |
- |
GYCUME1_I-int |
LTR/Gypsy |
| scaffold4949 |
6994 |
8339 |
- |
GYCUME1_I-int |
LTR/Gypsy |
| scaffold4949 |
8489 |
8606 |
- |
Gypsy-28_VV-I |
LTR/Gypsy |
| scaffold4949 |
8740 |
8837 |
- |
Gypsy-28_VV-I |
LTR/Gypsy |
| scaffold4949 |
9008 |
9685 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold4949 |
10811 |
10827 |
+ |
(AT)n |
Simple_repeat |
| scaffold4949 |
14636 |
14791 |
+ |
RS10766 |
Unspecified |
| scaffold4949 |
14798 |
14833 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold4949 |
15041 |
15209 |
+ |
RS14172 |
Unspecified |
| scaffold4949 |
15671 |
15695 |
+ |
(TA)n |
Simple_repeat |
| scaffold4949 |
16147 |
16245 |
+ |
GA-rich |
Low_complexity |
| scaffold4949 |
17938 |
18134 |
- |
RS169 |
Unspecified |
| scaffold4949 |
17947 |
18106 |
- |
RS169 |
Unspecified |
| scaffold4949 |
18512 |
18563 |
+ |
(CT)n |
Simple_repeat |
| scaffold4949 |
19499 |
19600 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold4949 |
19501 |
19538 |
+ |
(CAC)n |
Simple_repeat |
| scaffold4949 |
20716 |
20758 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold4949 |
20816 |
20993 |
+ |
RS38 |
Unspecified |
| scaffold4949 |
21129 |
21162 |
+ |
(TGT)n |
Simple_repeat |
| scaffold4949 |
24821 |
24869 |
+ |
(TTACAAT)n |
Simple_repeat |
| scaffold4949 |
25207 |
25324 |
+ |
RS8966 |
Unspecified |
| scaffold4949 |
26540 |
27110 |
+ |
PL503 |
Unspecified |
| scaffold4949 |
27338 |
27426 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4949 |
27338 |
27568 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4949 |
27394 |
27568 |
- |
RS4949 |
Unspecified |
| scaffold4949 |
27426 |
27757 |
- |
RS2386 |
Unspecified |
| scaffold4949 |
27993 |
28026 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold4949 |
28469 |
28568 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold4949 |
28848 |
30395 |
- |
RS245 |
Unspecified |
| scaffold4949 |
30320 |
30443 |
- |
PL618 |
Unspecified |
| scaffold4949 |
30434 |
30959 |
+ |
PL530 |
Unspecified |
| scaffold4949 |
31164 |
31632 |
+ |
PL530 |
Unspecified |
| scaffold4949 |
31633 |
31811 |
- |
RS75 |
Unspecified |
| scaffold4949 |
31969 |
31996 |
+ |
(T)n |
Simple_repeat |
| scaffold4949 |
32812 |
32900 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4949 |
33384 |
37522 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold4949 |
37520 |
37690 |
+ |
PL643 |
Unspecified |
| scaffold4949 |
39927 |
39967 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4949 |
40611 |
41210 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4949 |
41424 |
41485 |
+ |
(TGA)n |
Simple_repeat |
| scaffold4949 |
42489 |
42556 |
+ |
A-rich |
Low_complexity |
| scaffold4949 |
43174 |
43228 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4949 |
43225 |
43297 |
+ |
RS8316 |
Unspecified |
| scaffold4949 |
43295 |
45126 |
- |
RS564 |
Unspecified |
| scaffold4949 |
44567 |
45301 |
- |
PL957 |
Unspecified |
| scaffold4949 |
45320 |
45798 |
+ |
RS2918 |
Unspecified |
| scaffold4949 |
45320 |
45858 |
- |
PL495 |
Unspecified |
| scaffold4949 |
45790 |
46201 |
+ |
RS6789 |
Unspecified |
| scaffold4949 |
45801 |
46338 |
- |
PL894 |
Unspecified |
| scaffold4949 |
46338 |
46384 |
- |
RS101 |
Unspecified |
| scaffold4949 |
46350 |
46384 |
+ |
RS1686 |
Unspecified |
| scaffold4949 |
47016 |
47069 |
- |
Copia-86_ST-I |
LTR/Copia |