scaffold499 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold499 |
1 |
37 |
- |
PL329 |
Unspecified |
| scaffold499 |
887 |
909 |
+ |
(A)n |
Simple_repeat |
| scaffold499 |
1588 |
1770 |
- |
RS4 |
Unspecified |
| scaffold499 |
2110 |
2233 |
+ |
RS152 |
Unspecified |
| scaffold499 |
2236 |
2414 |
- |
RS503 |
Unspecified |
| scaffold499 |
2437 |
2541 |
- |
RS16382 |
Unspecified |
| scaffold499 |
2569 |
2690 |
+ |
RS13687 |
Unspecified |
| scaffold499 |
2873 |
2927 |
+ |
(AT)n |
Simple_repeat |
| scaffold499 |
3276 |
3329 |
+ |
(TAT)n |
Simple_repeat |
| scaffold499 |
3365 |
3439 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold499 |
3474 |
3495 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
4082 |
4188 |
+ |
RS13049 |
Unspecified |
| scaffold499 |
4196 |
4531 |
+ |
RS10443 |
Unspecified |
| scaffold499 |
4612 |
4938 |
+ |
RS17471 |
Unspecified |
| scaffold499 |
4940 |
5123 |
+ |
RS7005 |
Unspecified |
| scaffold499 |
6426 |
6467 |
+ |
(AAT)n |
Simple_repeat |
| scaffold499 |
7366 |
7423 |
+ |
(TCACATT)n |
Simple_repeat |
| scaffold499 |
8787 |
9312 |
- |
RS3492 |
Unspecified |
| scaffold499 |
9511 |
9532 |
+ |
(A)n |
Simple_repeat |
| scaffold499 |
9642 |
9720 |
- |
RS3245 |
Unspecified |
| scaffold499 |
9700 |
9803 |
- |
PL803 |
Unspecified |
| scaffold499 |
10185 |
10233 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold499 |
10485 |
10546 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold499 |
10602 |
10639 |
+ |
(ATTTATT)n |
Simple_repeat |
| scaffold499 |
10717 |
10739 |
+ |
(AATT)n |
Simple_repeat |
| scaffold499 |
10844 |
10985 |
+ |
RS11618 |
Unspecified |
| scaffold499 |
11418 |
11623 |
- |
RS2093 |
Unspecified |
| scaffold499 |
11746 |
11768 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
11891 |
11909 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
12365 |
12502 |
- |
RS9432 |
Unspecified |
| scaffold499 |
12384 |
12562 |
+ |
RS1186 |
Unspecified |
| scaffold499 |
12433 |
12638 |
- |
RS2093 |
Unspecified |
| scaffold499 |
14199 |
14242 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
14575 |
14592 |
+ |
G-rich |
Low_complexity |
| scaffold499 |
14593 |
14672 |
+ |
(GGCG)n |
Simple_repeat |
| scaffold499 |
14735 |
14753 |
+ |
(GTG)n |
Simple_repeat |
| scaffold499 |
14756 |
14828 |
+ |
(GCC)n |
Simple_repeat |
| scaffold499 |
15145 |
15262 |
- |
PL134 |
Unspecified |
| scaffold499 |
16455 |
16561 |
+ |
RS1127 |
Unspecified |
| scaffold499 |
17401 |
17448 |
+ |
(TGA)n |
Simple_repeat |
| scaffold499 |
17601 |
18158 |
+ |
PL396 |
Unspecified |
| scaffold499 |
19007 |
19029 |
+ |
(A)n |
Simple_repeat |
| scaffold499 |
19708 |
19890 |
- |
RS4 |
Unspecified |
| scaffold499 |
20230 |
20353 |
+ |
RS152 |
Unspecified |
| scaffold499 |
20356 |
20534 |
- |
RS503 |
Unspecified |
| scaffold499 |
20557 |
20661 |
- |
RS16382 |
Unspecified |
| scaffold499 |
20689 |
20810 |
+ |
RS13687 |
Unspecified |
| scaffold499 |
20993 |
21047 |
+ |
(AT)n |
Simple_repeat |
| scaffold499 |
21396 |
21449 |
+ |
(TAT)n |
Simple_repeat |
| scaffold499 |
21485 |
21559 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold499 |
21594 |
21615 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
22202 |
22308 |
+ |
RS13049 |
Unspecified |
| scaffold499 |
22316 |
22651 |
+ |
RS10443 |
Unspecified |
| scaffold499 |
24015 |
24052 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold499 |
24311 |
24369 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold499 |
24647 |
24689 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
25131 |
25532 |
+ |
RS29 |
Unspecified |
| scaffold499 |
25576 |
25961 |
+ |
RS29 |
Unspecified |
| scaffold499 |
26219 |
26483 |
+ |
RS17600 |
Unspecified |
| scaffold499 |
26439 |
26490 |
+ |
RS10 |
Unspecified |
| scaffold499 |
26540 |
27068 |
- |
PL782 |
Unspecified |
| scaffold499 |
27400 |
27547 |
+ |
RS549 |
Unspecified |
| scaffold499 |
27548 |
27602 |
+ |
(CATTTCA)n |
Simple_repeat |
| scaffold499 |
28381 |
28410 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
29160 |
29518 |
- |
RS2487 |
Unspecified |
| scaffold499 |
29223 |
29757 |
+ |
RS1464 |
Unspecified |
| scaffold499 |
29812 |
29833 |
+ |
(AATT)n |
Simple_repeat |
| scaffold499 |
29854 |
29998 |
+ |
RS2426 |
Unspecified |
| scaffold499 |
30191 |
30265 |
+ |
(ATA)n |
Simple_repeat |
| scaffold499 |
30396 |
30473 |
+ |
(TA)n |
Simple_repeat |
| scaffold499 |
30850 |
31030 |
- |
RS18020 |
Unspecified |
| scaffold499 |
31252 |
31287 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold499 |
31311 |
31357 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold499 |
31362 |
32184 |
- |
Copia-102_GM-I |
LTR/Copia |
| scaffold499 |
32328 |
33071 |
- |
Copia-102_GM-I |
LTR/Copia |
| scaffold499 |
33098 |
33197 |
- |
RS10802 |
Unspecified |
| scaffold499 |
33287 |
36755 |
- |
Copia-102_GM-I |
LTR/Copia |
| scaffold499 |
36899 |
37642 |
- |
Copia-102_GM-I |
LTR/Copia |
| scaffold499 |
37669 |
37768 |
- |
RS10802 |
Unspecified |
| scaffold499 |
37873 |
38306 |
- |
PL301 |
Unspecified |
| scaffold499 |
38447 |
38490 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
38768 |
38863 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold499 |
38885 |
38979 |
+ |
(ATT)n |
Simple_repeat |
| scaffold499 |
38990 |
39028 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold499 |
39201 |
39329 |
+ |
(TTA)n |
Simple_repeat |
| scaffold499 |
39336 |
39429 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold499 |
39763 |
40117 |
+ |
RS357 |
Unspecified |
| scaffold499 |
40113 |
40167 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
40222 |
40361 |
- |
PL139 |
Unspecified |
| scaffold499 |
42042 |
42101 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
42710 |
42792 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
43042 |
43126 |
+ |
A-rich |
Low_complexity |
| scaffold499 |
43202 |
43241 |
+ |
(ATTTATA)n |
Simple_repeat |
| scaffold499 |
43521 |
43574 |
+ |
(TAT)n |
Simple_repeat |
| scaffold499 |
44797 |
45271 |
+ |
RS9492 |
Unspecified |
| scaffold499 |
44848 |
45475 |
- |
RS1560 |
Unspecified |
| scaffold499 |
45998 |
46194 |
- |
RS1512 |
Unspecified |
| scaffold499 |
46219 |
46253 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold499 |
46256 |
46377 |
- |
META1_I-int |
LTR/Copia |
| scaffold499 |
46510 |
46641 |
- |
Copia-88_VV-I |
LTR/Copia |
| scaffold499 |
47779 |
48727 |
- |
RS1013 |
Unspecified |
| scaffold499 |
48747 |
48970 |
+ |
RS10181 |
Unspecified |
| scaffold499 |
48959 |
49161 |
+ |
RS4647 |
Unspecified |
| scaffold499 |
49407 |
49506 |
+ |
RS7537 |
Unspecified |
| scaffold499 |
49548 |
49734 |
+ |
RS7956 |
Unspecified |
| scaffold499 |
49813 |
49959 |
+ |
RS7527 |
Unspecified |
| scaffold499 |
50826 |
50873 |
+ |
(AATA)n |
Simple_repeat |
| scaffold499 |
50964 |
51174 |
- |
RS1512 |
Unspecified |
| scaffold499 |
51286 |
51313 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
51449 |
51477 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
51849 |
52112 |
+ |
RS356 |
Unspecified |
| scaffold499 |
52414 |
52438 |
+ |
(A)n |
Simple_repeat |
| scaffold499 |
52579 |
52609 |
+ |
(A)n |
Simple_repeat |
| scaffold499 |
52768 |
52811 |
+ |
(ATTCTC)n |
Simple_repeat |
| scaffold499 |
52809 |
52883 |
+ |
(ATTAC)n |
Simple_repeat |
| scaffold499 |
53390 |
53419 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
53505 |
53534 |
+ |
(T)n |
Simple_repeat |
| scaffold499 |
53616 |
53718 |
- |
META1_I-int |
LTR/Copia |
| scaffold499 |
137075 |
137258 |
- |
RS701 |
Unspecified |