scaffold512 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold512 |
1 |
305 |
- |
RS439 |
Unspecified |
scaffold512 |
305 |
486 |
- |
RS13348 |
Unspecified |
scaffold512 |
330 |
510 |
+ |
RS757 |
Unspecified |
scaffold512 |
530 |
560 |
+ |
(TGACTA)n |
Simple_repeat |
scaffold512 |
711 |
800 |
+ |
(TTTTT)n |
Simple_repeat |
scaffold512 |
801 |
808 |
+ |
(TTTG)n |
Simple_repeat |
scaffold512 |
928 |
999 |
- |
RS573 |
Unspecified |
scaffold512 |
1238 |
1266 |
+ |
GA-rich |
Low_complexity |
scaffold512 |
1705 |
1870 |
- |
DNA9-1_Mad |
DNA/MULE-MuDR |
scaffold512 |
2168 |
2287 |
+ |
RS2112 |
Unspecified |
scaffold512 |
4891 |
4980 |
+ |
RS3513 |
Unspecified |
scaffold512 |
6026 |
6056 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
9125 |
9166 |
+ |
(TGCA)n |
Simple_repeat |
scaffold512 |
10104 |
10554 |
- |
PL2 |
Unspecified |
scaffold512 |
10567 |
10612 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
10706 |
10739 |
+ |
(AATATT)n |
Simple_repeat |
scaffold512 |
11504 |
11568 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold512 |
12923 |
13056 |
- |
Copia-2_SL-LTR |
LTR/Copia |
scaffold512 |
17885 |
17977 |
+ |
RS972 |
Unspecified |
scaffold512 |
18068 |
18188 |
+ |
A-rich |
Low_complexity |
scaffold512 |
19095 |
19271 |
- |
RS371 |
Unspecified |
scaffold512 |
19549 |
19567 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
20002 |
20033 |
+ |
(TTTGG)n |
Simple_repeat |
scaffold512 |
20138 |
20486 |
+ |
RS42 |
Unspecified |
scaffold512 |
20970 |
21031 |
+ |
(AACTG)n |
Simple_repeat |
scaffold512 |
20970 |
21120 |
+ |
(AACTG)n |
Simple_repeat |
scaffold512 |
21023 |
21120 |
+ |
RS18022 |
Unspecified |
scaffold512 |
21035 |
21179 |
+ |
RS115 |
Unspecified |
scaffold512 |
21206 |
21299 |
+ |
(AACTG)n |
Simple_repeat |
scaffold512 |
22411 |
22436 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
22660 |
22714 |
+ |
COP_I_MT-int |
LTR/Copia |
scaffold512 |
22715 |
22886 |
- |
RS3973 |
Unspecified |
scaffold512 |
22715 |
22860 |
- |
RS3128 |
Unspecified |
scaffold512 |
23110 |
23536 |
- |
RS458 |
Unspecified |
scaffold512 |
23920 |
24170 |
- |
RS4864 |
Unspecified |
scaffold512 |
24002 |
24229 |
+ |
RS3355 |
Unspecified |
scaffold512 |
24136 |
24352 |
- |
RS4164 |
Unspecified |
scaffold512 |
24266 |
24492 |
+ |
RS6025 |
Unspecified |
scaffold512 |
24542 |
24820 |
- |
RS3687 |
Unspecified |
scaffold512 |
24921 |
25074 |
- |
RS3919 |
Unspecified |
scaffold512 |
25079 |
25269 |
- |
RS11056 |
Unspecified |
scaffold512 |
25783 |
25885 |
+ |
(AATACA)n |
Simple_repeat |
scaffold512 |
26453 |
26554 |
+ |
RS2749 |
Unspecified |
scaffold512 |
28865 |
28936 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold512 |
29111 |
29177 |
- |
SINE1_MT |
SINE/tRNA |
scaffold512 |
29411 |
29445 |
+ |
(ATTTTAA)n |
Simple_repeat |
scaffold512 |
30143 |
30207 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
scaffold512 |
30885 |
30916 |
+ |
(ATA)n |
Simple_repeat |
scaffold512 |
32310 |
32617 |
+ |
RS499 |
Unspecified |
scaffold512 |
33551 |
33587 |
- |
RS5319 |
Unspecified |
scaffold512 |
33557 |
33747 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
33724 |
33747 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
33854 |
34171 |
+ |
PL2 |
Unspecified |
scaffold512 |
34169 |
34362 |
+ |
PL2 |
Unspecified |
scaffold512 |
34719 |
34771 |
+ |
RS10352 |
Unspecified |
scaffold512 |
37593 |
37723 |
- |
RS4130 |
Unspecified |
scaffold512 |
41889 |
42058 |
+ |
RS10352 |
Unspecified |
scaffold512 |
42475 |
42577 |
+ |
RS162 |
Unspecified |
scaffold512 |
44459 |
44588 |
- |
RS4130 |
Unspecified |
scaffold512 |
47695 |
47844 |
- |
RS6043 |
Unspecified |
scaffold512 |
48774 |
48941 |
+ |
RS10352 |
Unspecified |
scaffold512 |
50440 |
50459 |
+ |
(AC)n |
Simple_repeat |
scaffold512 |
51995 |
52077 |
- |
Gypsy-187_ZM-I |
LTR/Gypsy |
scaffold512 |
52993 |
53029 |
+ |
(TTAGGT)n |
Simple_repeat |
scaffold512 |
53491 |
53516 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
53538 |
53965 |
- |
RS214 |
Unspecified |
scaffold512 |
54005 |
54346 |
- |
RS214 |
Unspecified |
scaffold512 |
54441 |
54482 |
+ |
(AATTTTT)n |
Simple_repeat |
scaffold512 |
55065 |
55118 |
+ |
A-rich |
Low_complexity |
scaffold512 |
55260 |
55293 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold512 |
55444 |
55467 |
+ |
(ATAA)n |
Simple_repeat |
scaffold512 |
55643 |
55675 |
+ |
(ATTTAG)n |
Simple_repeat |
scaffold512 |
55748 |
55816 |
+ |
A-rich |
Low_complexity |
scaffold512 |
56334 |
56354 |
+ |
(ATTT)n |
Simple_repeat |
scaffold512 |
56700 |
56744 |
+ |
A-rich |
Low_complexity |
scaffold512 |
56862 |
56890 |
+ |
(ATA)n |
Simple_repeat |
scaffold512 |
57811 |
57844 |
- |
Gypsy-80-I_ZM |
LTR/Gypsy |
scaffold512 |
58383 |
58495 |
+ |
A-rich |
Low_complexity |
scaffold512 |
59178 |
59228 |
+ |
(TTTTTAT)n |
Simple_repeat |
scaffold512 |
59389 |
59559 |
- |
RS16206 |
Unspecified |
scaffold512 |
59591 |
59961 |
- |
PL580 |
Unspecified |
scaffold512 |
60300 |
60482 |
+ |
RS453 |
Unspecified |
scaffold512 |
60509 |
60572 |
+ |
(TTAATT)n |
Simple_repeat |
scaffold512 |
60821 |
60837 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
61173 |
61189 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
62726 |
62844 |
+ |
RS347 |
Unspecified |
scaffold512 |
62842 |
63125 |
- |
LTR2-ZM_LTR |
LTR |
scaffold512 |
63333 |
63420 |
+ |
LTR-2_MX-LTR |
LTR |
scaffold512 |
63903 |
63936 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
64097 |
64135 |
+ |
A-rich |
Low_complexity |
scaffold512 |
64392 |
64422 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold512 |
65190 |
65293 |
+ |
RS45 |
Unspecified |
scaffold512 |
65204 |
65293 |
- |
RS516 |
Unspecified |
scaffold512 |
66662 |
66783 |
+ |
RS14436 |
Unspecified |
scaffold512 |
67324 |
67868 |
- |
RS3761 |
Unspecified |
scaffold512 |
70649 |
70687 |
+ |
(AATCAA)n |
Simple_repeat |
scaffold512 |
71426 |
71457 |
+ |
GA-rich |
Low_complexity |
scaffold512 |
71474 |
71663 |
+ |
(TTCAAG)n |
Simple_repeat |
scaffold512 |
71669 |
71808 |
+ |
(CTACAA)n |
Simple_repeat |
scaffold512 |
72596 |
72662 |
+ |
(GGTTG)n |
Simple_repeat |
scaffold512 |
73964 |
74037 |
+ |
G-rich |
Low_complexity |
scaffold512 |
74360 |
74443 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
scaffold512 |
74487 |
74523 |
+ |
G-rich |
Low_complexity |
scaffold512 |
74592 |
74626 |
+ |
(TTAC)n |
Simple_repeat |
scaffold512 |
74981 |
75099 |
- |
RS144 |
Unspecified |
scaffold512 |
75116 |
75147 |
+ |
(CAC)n |
Simple_repeat |
scaffold512 |
75364 |
75392 |
+ |
(AAT)n |
Simple_repeat |
scaffold512 |
76096 |
76129 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
76493 |
76521 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
76656 |
76710 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
76992 |
77165 |
- |
RS14475 |
Unspecified |
scaffold512 |
77479 |
77503 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
77551 |
77578 |
+ |
(TGAAG)n |
Simple_repeat |
scaffold512 |
77961 |
77998 |
+ |
(ATACAA)n |
Simple_repeat |
scaffold512 |
78283 |
78334 |
- |
RS4332 |
Unspecified |
scaffold512 |
78285 |
78345 |
- |
RS8556 |
Unspecified |
scaffold512 |
80768 |
80817 |
+ |
(TTCCCCTTCC)n |
Simple_repeat |
scaffold512 |
81789 |
82090 |
+ |
PL9 |
Unspecified |
scaffold512 |
82841 |
83343 |
- |
RS4135 |
Unspecified |
scaffold512 |
83347 |
83471 |
- |
RS3529 |
Unspecified |
scaffold512 |
83608 |
83870 |
+ |
RS3281 |
Unspecified |
scaffold512 |
84952 |
85417 |
- |
RS3207 |
Unspecified |
scaffold512 |
85288 |
85436 |
- |
RS2404 |
Unspecified |
scaffold512 |
85460 |
85577 |
- |
RS3483 |
Unspecified |
scaffold512 |
85575 |
85840 |
- |
RS4332 |
Unspecified |
scaffold512 |
85686 |
85982 |
- |
RS4576 |
Unspecified |
scaffold512 |
85995 |
86103 |
- |
RS4328 |
Unspecified |
scaffold512 |
86282 |
86638 |
- |
RS10606 |
Unspecified |
scaffold512 |
86799 |
86970 |
- |
RS8556 |
Unspecified |
scaffold512 |
86910 |
87021 |
- |
RS10606 |
Unspecified |
scaffold512 |
87859 |
88004 |
- |
RS5197 |
Unspecified |
scaffold512 |
87859 |
88044 |
+ |
PL688 |
Unspecified |
scaffold512 |
88543 |
88564 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
88689 |
88805 |
- |
RS14777 |
Unspecified |
scaffold512 |
88951 |
89232 |
- |
PL688 |
Unspecified |
scaffold512 |
89426 |
89464 |
+ |
(TCAATT)n |
Simple_repeat |
scaffold512 |
89873 |
89906 |
+ |
A-rich |
Low_complexity |
scaffold512 |
90172 |
90234 |
+ |
(TAT)n |
Simple_repeat |
scaffold512 |
90512 |
90660 |
+ |
(ATT)n |
Simple_repeat |
scaffold512 |
90697 |
90828 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
scaffold512 |
90850 |
90946 |
+ |
(TAA)n |
Simple_repeat |
scaffold512 |
92865 |
92963 |
+ |
(TAT)n |
Simple_repeat |
scaffold512 |
94406 |
94496 |
+ |
(TTA)n |
Simple_repeat |
scaffold512 |
94497 |
94530 |
+ |
(ATAATT)n |
Simple_repeat |
scaffold512 |
94638 |
94722 |
+ |
(TGAAGTTTTC)n |
Simple_repeat |
scaffold512 |
94761 |
94833 |
+ |
RS6307 |
Unspecified |
scaffold512 |
95225 |
95553 |
- |
RS8556 |
Unspecified |
scaffold512 |
95728 |
95766 |
+ |
A-rich |
Low_complexity |
scaffold512 |
99327 |
99548 |
- |
RS4135 |
Unspecified |
scaffold512 |
99942 |
99990 |
+ |
(GCTCGG)n |
Simple_repeat |
scaffold512 |
100077 |
100368 |
- |
RS4135 |
Unspecified |
scaffold512 |
101197 |
101668 |
- |
RS3529 |
Unspecified |
scaffold512 |
102093 |
102162 |
- |
RS3207 |
Unspecified |
scaffold512 |
102119 |
102162 |
- |
RS2404 |
Unspecified |
scaffold512 |
102124 |
102161 |
- |
RS10461 |
Unspecified |
scaffold512 |
103546 |
103842 |
- |
RS3207 |
Unspecified |
scaffold512 |
103725 |
103862 |
- |
RS2404 |
Unspecified |
scaffold512 |
103886 |
103973 |
- |
RS3483 |
Unspecified |
scaffold512 |
104014 |
104057 |
+ |
(GACCCA)n |
Simple_repeat |
scaffold512 |
104200 |
104343 |
+ |
RS2875 |
Unspecified |
scaffold512 |
104473 |
104489 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
104530 |
104584 |
+ |
(GACCCA)n |
Simple_repeat |
scaffold512 |
104621 |
104652 |
+ |
G-rich |
Low_complexity |
scaffold512 |
104673 |
104743 |
- |
RS3483 |
Unspecified |
scaffold512 |
104796 |
105079 |
- |
RS4332 |
Unspecified |
scaffold512 |
104920 |
105104 |
- |
RS4576 |
Unspecified |
scaffold512 |
105115 |
105153 |
- |
RS8375 |
Unspecified |
scaffold512 |
105260 |
105326 |
- |
RS8556 |
Unspecified |
scaffold512 |
108286 |
108336 |
- |
RS9534 |
Unspecified |
scaffold512 |
108950 |
109020 |
- |
RS4135 |
Unspecified |
scaffold512 |
109341 |
109418 |
- |
RS2734 |
Unspecified |
scaffold512 |
109847 |
109948 |
- |
RS3483 |
Unspecified |
scaffold512 |
110366 |
110448 |
- |
RS8556 |
Unspecified |
scaffold512 |
111182 |
111513 |
- |
RS8556 |
Unspecified |
scaffold512 |
111644 |
111693 |
+ |
A-rich |
Low_complexity |
scaffold512 |
114513 |
114550 |
+ |
(TTTTGGT)n |
Simple_repeat |
scaffold512 |
115218 |
115707 |
- |
RS4135 |
Unspecified |
scaffold512 |
115711 |
116268 |
- |
RS3529 |
Unspecified |
scaffold512 |
115977 |
116315 |
+ |
RS4789 |
Unspecified |
scaffold512 |
116390 |
116827 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold512 |
116411 |
116807 |
+ |
Copia-5_Pru-I |
LTR/Copia |
scaffold512 |
116962 |
117005 |
+ |
GA-rich |
Low_complexity |
scaffold512 |
117167 |
118754 |
+ |
Copia-5_Pru-I |
LTR/Copia |
scaffold512 |
118755 |
119201 |
+ |
RS2628 |
Unspecified |
scaffold512 |
119202 |
119476 |
- |
RS3529 |
Unspecified |
scaffold512 |
119511 |
119606 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
scaffold512 |
123685 |
123708 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
123709 |
123718 |
+ |
(TTCTT)n |
Simple_repeat |
scaffold512 |
123719 |
123772 |
+ |
(AATC)n |
Simple_repeat |
scaffold512 |
124080 |
124109 |
+ |
(GGTTG)n |
Simple_repeat |
scaffold512 |
124220 |
124347 |
- |
RS4135 |
Unspecified |
scaffold512 |
124351 |
124496 |
- |
RS3529 |
Unspecified |
scaffold512 |
124495 |
124620 |
+ |
PL560 |
Unspecified |
scaffold512 |
124625 |
124701 |
+ |
PL560 |
Unspecified |
scaffold512 |
124700 |
124877 |
+ |
PL560 |
Unspecified |
scaffold512 |
124882 |
125233 |
- |
RS3529 |
Unspecified |
scaffold512 |
125230 |
125394 |
- |
RS10461 |
Unspecified |
scaffold512 |
125447 |
125492 |
+ |
(AATTAG)n |
Simple_repeat |
scaffold512 |
125946 |
125987 |
- |
RS4576 |
Unspecified |
scaffold512 |
126843 |
127011 |
+ |
RS10352 |
Unspecified |
scaffold512 |
129258 |
129295 |
+ |
(ACT)n |
Simple_repeat |
scaffold512 |
129996 |
130128 |
- |
RS4130 |
Unspecified |
scaffold512 |
130430 |
130473 |
- |
RS4576 |
Unspecified |
scaffold512 |
133851 |
134956 |
- |
Copia-71_VV-I |
LTR/Copia |
scaffold512 |
134187 |
134221 |
+ |
A-rich |
Low_complexity |
scaffold512 |
134925 |
134966 |
- |
Copia-71_VV-I |
LTR/Copia |
scaffold512 |
136057 |
136189 |
- |
RS4130 |
Unspecified |
scaffold512 |
138330 |
138446 |
- |
RS4130 |
Unspecified |
scaffold512 |
138748 |
138788 |
- |
RS4576 |
Unspecified |
scaffold512 |
140884 |
140937 |
- |
RS16879 |
Unspecified |
scaffold512 |
140897 |
141168 |
- |
RS898 |
Unspecified |
scaffold512 |
141052 |
141184 |
+ |
RS4042 |
Unspecified |
scaffold512 |
141483 |
141520 |
+ |
(TTTTGGT)n |
Simple_repeat |
scaffold512 |
142199 |
142690 |
- |
RS4135 |
Unspecified |
scaffold512 |
142694 |
143252 |
- |
RS3529 |
Unspecified |
scaffold512 |
142960 |
143299 |
+ |
RS4789 |
Unspecified |
scaffold512 |
143341 |
143783 |
+ |
Copia-79_ST-I |
LTR/Copia |
scaffold512 |
143939 |
143982 |
+ |
GA-rich |
Low_complexity |
scaffold512 |
144190 |
145783 |
+ |
Copia-79_ST-I |
LTR/Copia |
scaffold512 |
145096 |
145786 |
- |
Copia1-PTR_I-int |
LTR/Copia |
scaffold512 |
145776 |
146223 |
+ |
RS2628 |
Unspecified |
scaffold512 |
146224 |
146719 |
- |
RS3529 |
Unspecified |
scaffold512 |
146426 |
146766 |
+ |
RS4789 |
Unspecified |
scaffold512 |
147414 |
147471 |
+ |
RS1019 |
Unspecified |
scaffold512 |
147626 |
148071 |
- |
RS3207 |
Unspecified |
scaffold512 |
148100 |
148367 |
- |
RS4332 |
Unspecified |
scaffold512 |
148216 |
148538 |
- |
RS4576 |
Unspecified |
scaffold512 |
148550 |
148656 |
- |
RS4328 |
Unspecified |
scaffold512 |
148824 |
149181 |
- |
RS10606 |
Unspecified |
scaffold512 |
149340 |
149511 |
- |
RS8556 |
Unspecified |
scaffold512 |
149451 |
149562 |
- |
RS10606 |
Unspecified |
scaffold512 |
149612 |
149682 |
- |
RS4576 |
Unspecified |
scaffold512 |
150534 |
150594 |
- |
RS5197 |
Unspecified |
scaffold512 |
150691 |
150812 |
- |
RS14777 |
Unspecified |
scaffold512 |
150947 |
151019 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold512 |
151396 |
151434 |
+ |
(TCAATT)n |
Simple_repeat |
scaffold512 |
151647 |
151690 |
+ |
(TTTATA)n |
Simple_repeat |
scaffold512 |
152476 |
152776 |
- |
RS8556 |
Unspecified |
scaffold512 |
152923 |
152972 |
+ |
A-rich |
Low_complexity |
scaffold512 |
158516 |
158555 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold512 |
159163 |
159303 |
- |
Ogre-MT3_I-int |
LTR/Gypsy |
scaffold512 |
159363 |
159448 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold512 |
160301 |
160336 |
+ |
(CT)n |
Simple_repeat |
scaffold512 |
160443 |
160468 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
160540 |
160649 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold512 |
160603 |
160657 |
- |
Alfare1_I-int |
LTR/Copia? |
scaffold512 |
161762 |
161817 |
+ |
A-rich |
Low_complexity |
scaffold512 |
161859 |
161886 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
scaffold512 |
162563 |
162625 |
+ |
(AATCAAT)n |
Simple_repeat |
scaffold512 |
162959 |
163227 |
- |
RS916 |
Unspecified |
scaffold512 |
163240 |
163259 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
163283 |
163506 |
+ |
RS4789 |
Unspecified |
scaffold512 |
163508 |
163570 |
+ |
RS1019 |
Unspecified |
scaffold512 |
163715 |
163758 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
163978 |
164145 |
- |
RS10461 |
Unspecified |
scaffold512 |
164202 |
164242 |
+ |
(AATTAG)n |
Simple_repeat |
scaffold512 |
164723 |
164761 |
+ |
A-rich |
Low_complexity |
scaffold512 |
166055 |
166936 |
+ |
LINE |
LINE(TransposonPSI) |
scaffold512 |
166129 |
166189 |
+ |
L1-2_Mad |
LINE/L1 |
scaffold512 |
166415 |
166866 |
+ |
LINE1-19_SBi |
LINE/L1 |
scaffold512 |
166969 |
167016 |
+ |
L1-1_PTr |
LINE/L1 |
scaffold512 |
167137 |
167601 |
+ |
L1-15_GM |
LINE/L1 |
scaffold512 |
168560 |
168608 |
+ |
(TAATCA)n |
Simple_repeat |
scaffold512 |
168753 |
168810 |
+ |
A-rich |
Low_complexity |
scaffold512 |
169939 |
169977 |
- |
RS4576 |
Unspecified |
scaffold512 |
171595 |
171693 |
- |
RS4135 |
Unspecified |
scaffold512 |
173321 |
173376 |
- |
RS13966 |
Unspecified |
scaffold512 |
173481 |
173541 |
- |
RS4576 |
Unspecified |
scaffold512 |
173617 |
173666 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold512 |
173768 |
173884 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold512 |
173868 |
174000 |
+ |
SSU-rRNA_Ath |
rRNA |
scaffold512 |
174272 |
174362 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold512 |
175028 |
175150 |
+ |
RS14436 |
Unspecified |
scaffold512 |
177003 |
177082 |
- |
RS3207 |
Unspecified |
scaffold512 |
177075 |
177501 |
- |
RS3207 |
Unspecified |
scaffold512 |
177693 |
178014 |
- |
RS4576 |
Unspecified |
scaffold512 |
178072 |
178118 |
+ |
A-rich |
Low_complexity |
scaffold512 |
181521 |
181935 |
- |
RS4135 |
Unspecified |
scaffold512 |
181939 |
182080 |
- |
RS3529 |
Unspecified |
scaffold512 |
182078 |
182154 |
+ |
PL276 |
Unspecified |
scaffold512 |
182084 |
182127 |
+ |
PL688 |
Unspecified |
scaffold512 |
182089 |
182275 |
- |
PL688 |
Unspecified |
scaffold512 |
182128 |
182275 |
+ |
PL688 |
Unspecified |
scaffold512 |
182736 |
183007 |
- |
PL688 |
Unspecified |
scaffold512 |
183001 |
183440 |
- |
RS3529 |
Unspecified |
scaffold512 |
183450 |
183518 |
+ |
RS1019 |
Unspecified |
scaffold512 |
183882 |
184043 |
- |
RS10461 |
Unspecified |
scaffold512 |
184915 |
184953 |
- |
RS4576 |
Unspecified |
scaffold512 |
185465 |
185633 |
+ |
RS10352 |
Unspecified |
scaffold512 |
187948 |
187986 |
- |
RS4576 |
Unspecified |
scaffold512 |
193053 |
193093 |
- |
RS4576 |
Unspecified |
scaffold512 |
196282 |
196419 |
- |
RS6043 |
Unspecified |
scaffold512 |
196361 |
196470 |
- |
RS9534 |
Unspecified |
scaffold512 |
196483 |
196505 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
197052 |
197495 |
- |
RS4135 |
Unspecified |
scaffold512 |
197518 |
198072 |
- |
RS3529 |
Unspecified |
scaffold512 |
197780 |
198119 |
+ |
RS4789 |
Unspecified |
scaffold512 |
198531 |
198588 |
+ |
RS1019 |
Unspecified |
scaffold512 |
198746 |
199197 |
- |
RS3207 |
Unspecified |
scaffold512 |
199075 |
199218 |
- |
RS2404 |
Unspecified |
scaffold512 |
199239 |
199390 |
- |
RS3483 |
Unspecified |
scaffold512 |
199442 |
199502 |
- |
RS4332 |
Unspecified |
scaffold512 |
199738 |
199782 |
- |
RS966 |
Unspecified |
scaffold512 |
199776 |
199883 |
+ |
RS966 |
Unspecified |
scaffold512 |
199973 |
200127 |
- |
RS966 |
Unspecified |
scaffold512 |
200106 |
200294 |
- |
RS924 |
Unspecified |
scaffold512 |
200316 |
200380 |
+ |
(TCT)n |
Simple_repeat |
scaffold512 |
201533 |
201610 |
+ |
Copia-44_ZM-I |
LTR/Copia |
scaffold512 |
201533 |
201736 |
+ |
Copia-44_ZM-I |
LTR/Copia |
scaffold512 |
201584 |
201736 |
- |
RS966 |
Unspecified |
scaffold512 |
202731 |
202747 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
202940 |
202995 |
- |
RS13966 |
Unspecified |
scaffold512 |
203266 |
203398 |
- |
RS4130 |
Unspecified |
scaffold512 |
203700 |
203740 |
- |
RS4576 |
Unspecified |
scaffold512 |
207047 |
207169 |
+ |
RS14436 |
Unspecified |
scaffold512 |
207348 |
207454 |
- |
RS3818 |
Unspecified |
scaffold512 |
207486 |
208118 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold512 |
208345 |
211223 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold512 |
211224 |
211920 |
+ |
RS7192 |
Unspecified |
scaffold512 |
212011 |
212085 |
+ |
RS10799 |
Unspecified |
scaffold512 |
212134 |
212248 |
+ |
RS7192 |
Unspecified |
scaffold512 |
212445 |
212765 |
+ |
RS4170 |
Unspecified |
scaffold512 |
212807 |
213329 |
+ |
Copia-37_GM-I |
LTR/Copia |
scaffold512 |
213359 |
213464 |
- |
RS3818 |
Unspecified |
scaffold512 |
214735 |
214767 |
+ |
(GGTGGC)n |
Simple_repeat |
scaffold512 |
215255 |
215271 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
215576 |
215666 |
+ |
RS8041 |
Unspecified |
scaffold512 |
215775 |
216099 |
+ |
RS12023 |
Unspecified |
scaffold512 |
216826 |
217283 |
- |
RS3207 |
Unspecified |
scaffold512 |
217166 |
217324 |
- |
RS10461 |
Unspecified |
scaffold512 |
217472 |
217777 |
- |
RS4576 |
Unspecified |
scaffold512 |
217862 |
217975 |
- |
RS4130 |
Unspecified |
scaffold512 |
220477 |
220545 |
+ |
(TTGT)n |
Simple_repeat |
scaffold512 |
220562 |
220587 |
+ |
(AGA)n |
Simple_repeat |
scaffold512 |
221533 |
221633 |
- |
RS6043 |
Unspecified |
scaffold512 |
221575 |
221684 |
- |
RS9534 |
Unspecified |
scaffold512 |
222257 |
222748 |
- |
RS4135 |
Unspecified |
scaffold512 |
222752 |
223307 |
- |
RS3529 |
Unspecified |
scaffold512 |
223014 |
223343 |
+ |
RS4789 |
Unspecified |
scaffold512 |
223480 |
223568 |
- |
RS3207 |
Unspecified |
scaffold512 |
223620 |
223688 |
- |
RS10461 |
Unspecified |
scaffold512 |
224228 |
224347 |
- |
RS4130 |
Unspecified |
scaffold512 |
224538 |
224579 |
- |
RS4576 |
Unspecified |
scaffold512 |
225152 |
225173 |
+ |
(TAC)n |
Simple_repeat |
scaffold512 |
225801 |
225936 |
- |
RS4130 |
Unspecified |
scaffold512 |
226238 |
226281 |
- |
RS4576 |
Unspecified |
scaffold512 |
228824 |
228870 |
- |
RS6043 |
Unspecified |
scaffold512 |
229320 |
229441 |
+ |
RS14436 |
Unspecified |
scaffold512 |
230547 |
230679 |
- |
RS4130 |
Unspecified |
scaffold512 |
230981 |
231024 |
- |
RS4576 |
Unspecified |
scaffold512 |
234039 |
234162 |
+ |
RS14436 |
Unspecified |
scaffold512 |
235146 |
235180 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
235328 |
235372 |
+ |
A-rich |
Low_complexity |
scaffold512 |
235394 |
235461 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
236496 |
236578 |
- |
RS17326 |
Unspecified |
scaffold512 |
236966 |
237589 |
- |
RS10778 |
Unspecified |
scaffold512 |
237939 |
237985 |
- |
RS4412 |
Unspecified |
scaffold512 |
237944 |
238094 |
- |
RS2087 |
Unspecified |
scaffold512 |
237971 |
238231 |
+ |
RS3669 |
Unspecified |
scaffold512 |
238329 |
238407 |
- |
RS12077 |
Unspecified |
scaffold512 |
238451 |
238532 |
- |
RS4478 |
Unspecified |
scaffold512 |
238624 |
238710 |
+ |
RS43 |
Unspecified |
scaffold512 |
238978 |
239002 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
239159 |
239219 |
+ |
(TTCAT)n |
Simple_repeat |
scaffold512 |
239204 |
239228 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
240367 |
240420 |
+ |
A-rich |
Low_complexity |
scaffold512 |
240771 |
241351 |
+ |
RS1334 |
Unspecified |
scaffold512 |
242448 |
242527 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
242530 |
242565 |
+ |
(GCCG)n |
Simple_repeat |
scaffold512 |
242684 |
242720 |
+ |
(TA)n |
Simple_repeat |
scaffold512 |
243312 |
243447 |
+ |
(TATGTG)n |
Simple_repeat |
scaffold512 |
243412 |
243450 |
+ |
(GTATGTT)n |
Simple_repeat |
scaffold512 |
244475 |
244512 |
+ |
(ATTATA)n |
Simple_repeat |
scaffold512 |
244673 |
244971 |
- |
RS4494 |
Unspecified |
scaffold512 |
244981 |
245053 |
+ |
RS9428 |
Unspecified |
scaffold512 |
245054 |
245305 |
+ |
RS9428 |
Unspecified |
scaffold512 |
245946 |
245981 |
+ |
(TA)n |
Simple_repeat |
scaffold512 |
246746 |
246833 |
+ |
(AT)n |
Simple_repeat |
scaffold512 |
247143 |
247160 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
247206 |
247304 |
+ |
(TAA)n |
Simple_repeat |
scaffold512 |
247852 |
247882 |
+ |
(ACA)n |
Simple_repeat |
scaffold512 |
247883 |
247909 |
+ |
(TAA)n |
Simple_repeat |
scaffold512 |
248062 |
248104 |
+ |
(TAA)n |
Simple_repeat |
scaffold512 |
250530 |
250647 |
- |
RS4130 |
Unspecified |
scaffold512 |
252292 |
252350 |
+ |
(TTATGAC)n |
Simple_repeat |
scaffold512 |
254355 |
254402 |
+ |
(TTTTCAT)n |
Simple_repeat |
scaffold512 |
254801 |
254933 |
- |
RS4130 |
Unspecified |
scaffold512 |
255475 |
255545 |
+ |
A-rich |
Low_complexity |
scaffold512 |
255628 |
256301 |
+ |
(CTCTA)n |
Simple_repeat |
scaffold512 |
256219 |
256301 |
+ |
(CTCTA)n |
Simple_repeat |
scaffold512 |
256351 |
256486 |
+ |
(GACCC)n |
Simple_repeat |
scaffold512 |
256672 |
256697 |
+ |
(GACCC)n |
Simple_repeat |
scaffold512 |
256698 |
256754 |
+ |
(ACCCGAA)n |
Simple_repeat |
scaffold512 |
256755 |
256840 |
+ |
(GACCC)n |
Simple_repeat |
scaffold512 |
256971 |
257196 |
- |
RS2604 |
Unspecified |
scaffold512 |
257716 |
257754 |
+ |
(TTCTCTC)n |
Simple_repeat |
scaffold512 |
257980 |
258139 |
- |
RS6313 |
Unspecified |
scaffold512 |
258178 |
258213 |
+ |
(ATTA)n |
Simple_repeat |
scaffold512 |
259176 |
259362 |
+ |
RS7278 |
Unspecified |
scaffold512 |
259361 |
259403 |
+ |
(TATTT)n |
Simple_repeat |
scaffold512 |
259404 |
259443 |
+ |
(TATTA)n |
Simple_repeat |
scaffold512 |
259444 |
259469 |
+ |
(TATTT)n |
Simple_repeat |
scaffold512 |
259673 |
259775 |
+ |
RS4475 |
Unspecified |
scaffold512 |
259770 |
259864 |
+ |
A-rich |
Low_complexity |
scaffold512 |
260140 |
260236 |
- |
RS9238 |
Unspecified |
scaffold512 |
261244 |
261306 |
+ |
Gypsy-135_GM-I |
LTR/Gypsy |
scaffold512 |
261448 |
261854 |
+ |
Gypsy-135_GM-I |
LTR/Gypsy |
scaffold512 |
262021 |
264804 |
+ |
Gypsy-135_GM-I |
LTR/Gypsy |
scaffold512 |
265675 |
265764 |
- |
RS14436 |
Unspecified |
scaffold512 |
265813 |
265863 |
- |
RS4576 |
Unspecified |
scaffold512 |
269333 |
269470 |
- |
RS6043 |
Unspecified |
scaffold512 |
269412 |
269521 |
- |
RS9534 |
Unspecified |
scaffold512 |
270085 |
270575 |
- |
RS4135 |
Unspecified |
scaffold512 |
270579 |
270776 |
- |
RS3529 |
Unspecified |
scaffold512 |
270770 |
270894 |
- |
RS458 |
Unspecified |
scaffold512 |
270878 |
271059 |
- |
RS458 |
Unspecified |
scaffold512 |
271537 |
271554 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
271575 |
271727 |
- |
RS4164 |
Unspecified |
scaffold512 |
271638 |
271790 |
+ |
RS3355 |
Unspecified |
scaffold512 |
271698 |
271889 |
- |
RS4164 |
Unspecified |
scaffold512 |
271806 |
271899 |
+ |
RS11936 |
Unspecified |
scaffold512 |
272153 |
272429 |
- |
RS2499 |
Unspecified |
scaffold512 |
272658 |
272806 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
272767 |
272806 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
273131 |
273264 |
- |
RS9847 |
Unspecified |
scaffold512 |
273267 |
273315 |
+ |
(TTTTTT)n |
Simple_repeat |
scaffold512 |
273346 |
273721 |
- |
RS458 |
Unspecified |
scaffold512 |
273900 |
274111 |
+ |
RS11730 |
Unspecified |
scaffold512 |
274261 |
274421 |
+ |
RS11979 |
Unspecified |
scaffold512 |
274697 |
275002 |
+ |
RS8876 |
Unspecified |
scaffold512 |
275379 |
275549 |
+ |
RS14463 |
Unspecified |
scaffold512 |
275732 |
276047 |
+ |
RS1070 |
Unspecified |
scaffold512 |
276215 |
276251 |
+ |
(CGTGTC)n |
Simple_repeat |
scaffold512 |
278553 |
279102 |
+ |
RS13810 |
Unspecified |
scaffold512 |
279339 |
279418 |
- |
RS8419 |
Unspecified |
scaffold512 |
279526 |
279702 |
+ |
RS18217 |
Unspecified |
scaffold512 |
280138 |
280192 |
+ |
A-rich |
Low_complexity |
scaffold512 |
280526 |
280542 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
280560 |
280656 |
+ |
G-rich |
Low_complexity |
scaffold512 |
280712 |
280806 |
+ |
G-rich |
Low_complexity |
scaffold512 |
281018 |
281111 |
+ |
RS16382 |
Unspecified |
scaffold512 |
281505 |
281734 |
+ |
RS15131 |
Unspecified |
scaffold512 |
281759 |
281880 |
- |
RS4164 |
Unspecified |
scaffold512 |
281772 |
282006 |
+ |
RS11936 |
Unspecified |
scaffold512 |
282007 |
282054 |
+ |
(GTT)n |
Simple_repeat |
scaffold512 |
282125 |
282225 |
- |
RS4160 |
Unspecified |
scaffold512 |
282244 |
282387 |
+ |
RS325 |
Unspecified |
scaffold512 |
282674 |
283238 |
- |
RS7854 |
Unspecified |
scaffold512 |
283145 |
283254 |
+ |
PL289 |
Unspecified |
scaffold512 |
283238 |
283545 |
- |
RS861 |
Unspecified |
scaffold512 |
283300 |
283617 |
+ |
RS1100 |
Unspecified |
scaffold512 |
284116 |
284142 |
+ |
(A)n |
Simple_repeat |
scaffold512 |
284461 |
284503 |
+ |
(ATGG)n |
Simple_repeat |
scaffold512 |
285621 |
285686 |
- |
RS43 |
Unspecified |
scaffold512 |
285820 |
285881 |
+ |
A-rich |
Low_complexity |
scaffold512 |
285870 |
285963 |
+ |
(TCAA)n |
Simple_repeat |
scaffold512 |
285870 |
285902 |
+ |
(TCAA)n |
Simple_repeat |
scaffold512 |
285870 |
285994 |
+ |
(TCAA)n |
Simple_repeat |
scaffold512 |
285888 |
285963 |
- |
PL169 |
Unspecified |
scaffold512 |
285892 |
286037 |
+ |
(AATA)n |
Simple_repeat |
scaffold512 |
285985 |
286037 |
+ |
(AATA)n |
Simple_repeat |
scaffold512 |
286242 |
286311 |
+ |
(TTTA)n |
Simple_repeat |
scaffold512 |
290802 |
290863 |
+ |
(TTTA)n |
Simple_repeat |
scaffold512 |
292312 |
292355 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
294361 |
294395 |
+ |
GA-rich |
Low_complexity |
scaffold512 |
294919 |
294960 |
+ |
(T)n |
Simple_repeat |
scaffold512 |
297425 |
297470 |
+ |
(ATT)n |
Simple_repeat |
scaffold512 |
305424 |
305490 |
+ |
A-rich |
Low_complexity |
scaffold512 |
305573 |
305621 |
+ |
(CATCGC)n |
Simple_repeat |
scaffold512 |
305959 |
306291 |
- |
RS148 |
Unspecified |