scaffold51223 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold51223 |
401 |
500 |
+ |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold51223 |
1250 |
1296 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold51223 |
1426 |
1547 |
- |
RS8854 |
Unspecified |
| scaffold51223 |
1550 |
1678 |
+ |
RS13568 |
Unspecified |
| scaffold51223 |
1815 |
1876 |
+ |
RS12199 |
Unspecified |
| scaffold51223 |
3557 |
3687 |
+ |
RS3891 |
Unspecified |
| scaffold51223 |
3660 |
3788 |
+ |
RS3891 |
Unspecified |
| scaffold51223 |
4244 |
4446 |
+ |
RS2923 |
Unspecified |
| scaffold51223 |
5525 |
5660 |
+ |
RS3872 |
Unspecified |
| scaffold51223 |
5525 |
5645 |
+ |
RS12199 |
Unspecified |
| scaffold51223 |
7368 |
7399 |
+ |
(TA)n |
Simple_repeat |
| scaffold51223 |
7400 |
7421 |
+ |
(GA)n |
Simple_repeat |
| scaffold51223 |
8292 |
8369 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold51223 |
8446 |
10780 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold51223 |
10781 |
11025 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold51223 |
11311 |
11330 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold51223 |
11331 |
11346 |
+ |
(GCCGGCC)n |
Simple_repeat |
| scaffold51223 |
14289 |
14322 |
+ |
A-rich |
Low_complexity |
| scaffold51223 |
14792 |
16381 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold51223 |
15650 |
15754 |
+ |
RIRE8A_I-int |
LTR/Gypsy |
| scaffold51223 |
15853 |
15992 |
+ |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold51223 |
16093 |
16380 |
+ |
Gypsy-54_GM-I |
LTR/Gypsy |
| scaffold51223 |
16935 |
16981 |
+ |
(ACAC)n |
Simple_repeat |
| scaffold51223 |
17296 |
18947 |
+ |
RS27 |
Unspecified |
| scaffold51223 |
18932 |
20206 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold51223 |
18947 |
20080 |
+ |
RAM12_I-int |
LTR/Gypsy |
| scaffold51223 |
20310 |
21647 |
+ |
Gypsy-29_SB-I |
LTR/Gypsy |
| scaffold51223 |
21621 |
21684 |
+ |
Gypsy-127_ZM-I |
LTR/Gypsy |
| scaffold51223 |
22082 |
23247 |
- |
RS211 |
Unspecified |
| scaffold51223 |
23962 |
24386 |
- |
RS30 |
Unspecified |
| scaffold51223 |
24245 |
24420 |
- |
RS3060 |
Unspecified |
| scaffold51223 |
31072 |
31139 |
+ |
(T)n |
Simple_repeat |
| scaffold51223 |
31148 |
31529 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold51223 |
31502 |
31529 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold51223 |
31817 |
31918 |
- |
RS16382 |
Unspecified |
| scaffold51223 |
31824 |
31933 |
+ |
RS4475 |
Unspecified |
| scaffold51223 |
31942 |
31991 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold51223 |
32235 |
32327 |
+ |
(TAA)n |
Simple_repeat |
| scaffold51223 |
32466 |
32877 |
+ |
RS6312 |
Unspecified |
| scaffold51223 |
32933 |
32950 |
+ |
(GGT)n |
Simple_repeat |
| scaffold51223 |
33204 |
33257 |
+ |
(CTTTCC)n |
Simple_repeat |
| scaffold51223 |
35937 |
35966 |
+ |
G-rich |
Low_complexity |
| scaffold51223 |
36047 |
36236 |
+ |
RS14453 |
Unspecified |
| scaffold51223 |
36234 |
36369 |
+ |
RS3349 |
Unspecified |
| scaffold51223 |
36361 |
36743 |
+ |
RS2354 |
Unspecified |
| scaffold51223 |
36724 |
36954 |
+ |
RS2657 |
Unspecified |
| scaffold51223 |
36964 |
37199 |
+ |
RS4776 |
Unspecified |
| scaffold51223 |
37252 |
37524 |
- |
RS364 |
Unspecified |
| scaffold51223 |
37569 |
38133 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold51223 |
38273 |
38318 |
+ |
LINE1-12_ZM |
LINE/L1 |
| scaffold51223 |
39498 |
39526 |
+ |
(T)n |
Simple_repeat |
| scaffold51223 |
40004 |
40128 |
+ |
(A)n |
Simple_repeat |
| scaffold51223 |
40588 |
40638 |
+ |
(TTATATT)n |
Simple_repeat |
| scaffold51223 |
40639 |
40692 |
+ |
(T)n |
Simple_repeat |
| scaffold51223 |
40693 |
40712 |
+ |
(TTATATT)n |
Simple_repeat |
| scaffold51223 |
40853 |
40908 |
+ |
A-rich |
Low_complexity |
| scaffold51223 |
40979 |
41019 |
+ |
(TTACATG)n |
Simple_repeat |
| scaffold51223 |
40979 |
41529 |
+ |
(TTACATG)n |
Simple_repeat |
| scaffold51223 |
41012 |
41529 |
- |
PL351 |
Unspecified |
| scaffold51223 |
41662 |
41728 |
+ |
(AAC)n |
Simple_repeat |
| scaffold51223 |
41729 |
41781 |
+ |
(AAT)n |
Simple_repeat |
| scaffold51223 |
41782 |
41858 |
+ |
(AAC)n |
Simple_repeat |
| scaffold51223 |
41978 |
42083 |
- |
RS2978 |
Unspecified |
| scaffold51223 |
42271 |
42323 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold51223 |
42522 |
42903 |
- |
RS2963 |
Unspecified |
| scaffold51223 |
43049 |
43087 |
+ |
A-rich |
Low_complexity |
| scaffold51223 |
44130 |
44288 |
+ |
Copia-90_Mad-I |
LTR/Copia |
| scaffold51223 |
44553 |
44780 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold51223 |
44974 |
45097 |
- |
RS33 |
Unspecified |
| scaffold51223 |
45069 |
45127 |
+ |
PL473 |
Unspecified |
| scaffold51223 |
45711 |
45735 |
+ |
(A)n |
Simple_repeat |
| scaffold51223 |
45830 |
45987 |
+ |
RS8554 |
Unspecified |
| scaffold51223 |
46003 |
46064 |
+ |
(TTTATAA)n |
Simple_repeat |
| scaffold51223 |
46037 |
46065 |
+ |
A-rich |
Low_complexity |
| scaffold51223 |
46389 |
46473 |
- |
RS3144 |
Unspecified |
| scaffold51223 |
46734 |
46864 |
+ |
RS6645 |
Unspecified |
| scaffold51223 |
47605 |
48194 |
- |
PL66 |
Unspecified |
| scaffold51223 |
51483 |
51511 |
+ |
(ATGAAG)n |
Simple_repeat |
| scaffold51223 |
51795 |
52053 |
- |
RS41 |
Unspecified |
| scaffold51223 |
52958 |
53073 |
+ |
RS43 |
Unspecified |
| scaffold51223 |
53318 |
53574 |
- |
RS17600 |
Unspecified |
| scaffold51223 |
53586 |
54599 |
- |
RS245 |
Unspecified |
| scaffold51223 |
54948 |
55083 |
+ |
(TGG)n |
Simple_repeat |
| scaffold51223 |
55051 |
55083 |
+ |
(TGG)n |
Simple_repeat |
| scaffold51223 |
58035 |
58864 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold51223 |
58663 |
58864 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold51223 |
59221 |
59267 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold51223 |
59739 |
59838 |
+ |
RS250 |
Unspecified |
| scaffold51223 |
61102 |
61170 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold51223 |
61789 |
62166 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold51223 |
62819 |
62922 |
+ |
RS14830 |
Unspecified |
| scaffold51223 |
63115 |
63479 |
+ |
RS14337 |
Unspecified |
| scaffold51223 |
64959 |
64976 |
+ |
(T)n |
Simple_repeat |
| scaffold51223 |
65016 |
65046 |
+ |
(T)n |
Simple_repeat |
| scaffold51223 |
66018 |
66148 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold51223 |
67261 |
67350 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold51223 |
67385 |
67502 |
- |
RS123 |
Unspecified |
| scaffold51223 |
67503 |
68282 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold51223 |
67609 |
68282 |
- |
LINE1I_MT |
LINE/L1 |