scaffold5133 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5133 |
572 |
595 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
835 |
879 |
+ |
(GTTTTGT)n |
Simple_repeat |
| scaffold5133 |
3282 |
3590 |
- |
RS331 |
Unspecified |
| scaffold5133 |
3465 |
3739 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
3723 |
3739 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
4410 |
4426 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
4624 |
4791 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
4628 |
4791 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
4703 |
4791 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
5044 |
5106 |
+ |
(AAGTTAT)n |
Simple_repeat |
| scaffold5133 |
5684 |
6010 |
+ |
RS2097 |
Unspecified |
| scaffold5133 |
5742 |
6120 |
- |
RS995 |
Unspecified |
| scaffold5133 |
5955 |
6456 |
+ |
PL249 |
Unspecified |
| scaffold5133 |
6621 |
6632 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5133 |
6633 |
6668 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
6669 |
6678 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5133 |
6794 |
6817 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
7409 |
7428 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
10996 |
11176 |
- |
RS79 |
Unspecified |
| scaffold5133 |
11195 |
11218 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
11521 |
11606 |
- |
PL630 |
Unspecified |
| scaffold5133 |
11812 |
11992 |
- |
RS79 |
Unspecified |
| scaffold5133 |
12011 |
12034 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
12658 |
12686 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
12949 |
13269 |
+ |
RS748 |
Unspecified |
| scaffold5133 |
14298 |
14330 |
+ |
(TTGG)n |
Simple_repeat |
| scaffold5133 |
14810 |
14833 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
15200 |
15342 |
+ |
RS38 |
Unspecified |
| scaffold5133 |
15664 |
15681 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
16657 |
17918 |
+ |
Copia-30-I_VV |
LTR/Copia |
| scaffold5133 |
18249 |
19894 |
+ |
Copia-30-I_VV |
LTR/Copia |
| scaffold5133 |
20350 |
20374 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold5133 |
20958 |
20985 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold5133 |
21584 |
21655 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5133 |
21602 |
21642 |
- |
RS17699 |
Unspecified |
| scaffold5133 |
21610 |
21881 |
- |
RS1 |
Unspecified |
| scaffold5133 |
22501 |
22531 |
+ |
(CT)n |
Simple_repeat |
| scaffold5133 |
22573 |
22620 |
+ |
(AT)n |
Simple_repeat |
| scaffold5133 |
23002 |
23057 |
+ |
(CCCCTG)n |
Simple_repeat |
| scaffold5133 |
23440 |
23462 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5133 |
25678 |
25700 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
26554 |
26947 |
- |
PL363 |
Unspecified |
| scaffold5133 |
27145 |
27167 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
30302 |
30338 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
30481 |
30579 |
- |
RS16382 |
Unspecified |
| scaffold5133 |
30487 |
30595 |
+ |
RS6320 |
Unspecified |
| scaffold5133 |
30630 |
30973 |
- |
RS132 |
Unspecified |
| scaffold5133 |
31724 |
31767 |
+ |
(TTTTATG)n |
Simple_repeat |
| scaffold5133 |
32068 |
32160 |
- |
RS16382 |
Unspecified |
| scaffold5133 |
32072 |
32190 |
- |
PL436 |
Unspecified |
| scaffold5133 |
32850 |
33107 |
+ |
RS2064 |
Unspecified |
| scaffold5133 |
33115 |
33144 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5133 |
33668 |
33713 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
34058 |
34091 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
34628 |
34870 |
+ |
RS782 |
Unspecified |
| scaffold5133 |
35775 |
35980 |
- |
RS1129 |
Unspecified |
| scaffold5133 |
36072 |
36784 |
+ |
RS1129 |
Unspecified |
| scaffold5133 |
36940 |
37109 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5133 |
37534 |
37580 |
+ |
(GTCAG)n |
Simple_repeat |
| scaffold5133 |
38206 |
38230 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
38563 |
38654 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5133 |
38889 |
38931 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5133 |
40974 |
41012 |
+ |
(GAATA)n |
Simple_repeat |
| scaffold5133 |
41259 |
41431 |
+ |
RS17901 |
Unspecified |
| scaffold5133 |
41525 |
41643 |
+ |
RS15559 |
Unspecified |
| scaffold5133 |
41806 |
41829 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5133 |
41870 |
42305 |
+ |
BvL1-2 |
LINE/L1 |
| scaffold5133 |
42558 |
42646 |
+ |
BvL1 |
LINE/L1 |
| scaffold5133 |
42858 |
43077 |
- |
RS3755 |
Unspecified |
| scaffold5133 |
43268 |
43645 |
+ |
BvL1-2 |
LINE/L1 |
| scaffold5133 |
43646 |
43688 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5133 |
44330 |
44347 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
44451 |
44476 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
44569 |
44592 |
+ |
(A)n |
Simple_repeat |
| scaffold5133 |
44699 |
44912 |
+ |
RS35 |
Unspecified |
| scaffold5133 |
45703 |
45886 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5133 |
47340 |
47381 |
+ |
(TGG)n |
Simple_repeat |
| scaffold5133 |
47402 |
47434 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
48732 |
48816 |
- |
RS354 |
Unspecified |
| scaffold5133 |
48848 |
48939 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5133 |
50244 |
50509 |
+ |
RS356 |
Unspecified |
| scaffold5133 |
51117 |
51166 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold5133 |
51866 |
51905 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
52040 |
52128 |
- |
RS18358 |
Unspecified |
| scaffold5133 |
52131 |
52187 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold5133 |
52323 |
52505 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5133 |
52652 |
52858 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5133 |
53392 |
53468 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5133 |
54862 |
54892 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5133 |
55302 |
55352 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5133 |
55409 |
55474 |
- |
RS750 |
Unspecified |
| scaffold5133 |
55581 |
55617 |
+ |
(TA)n |
Simple_repeat |
| scaffold5133 |
58964 |
58998 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
61875 |
62396 |
- |
RS17541 |
Unspecified |
| scaffold5133 |
62627 |
62669 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5133 |
62795 |
62906 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
62969 |
63692 |
- |
RS15121 |
Unspecified |
| scaffold5133 |
63712 |
63875 |
- |
RS9510 |
Unspecified |
| scaffold5133 |
63875 |
63997 |
+ |
RS1774 |
Unspecified |
| scaffold5133 |
63950 |
64319 |
- |
RS8485 |
Unspecified |
| scaffold5133 |
64427 |
64465 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
64821 |
65746 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5133 |
64821 |
64926 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5133 |
64890 |
65746 |
- |
RS15993 |
Unspecified |
| scaffold5133 |
65791 |
66084 |
- |
RS13140 |
Unspecified |
| scaffold5133 |
66366 |
66409 |
+ |
A-rich |
Low_complexity |
| scaffold5133 |
66866 |
66914 |
+ |
BvL1 |
LINE/L1 |
| scaffold5133 |
67269 |
67367 |
- |
RS145 |
Unspecified |
| scaffold5133 |
67324 |
67522 |
+ |
PL436 |
Unspecified |
| scaffold5133 |
68117 |
68258 |
+ |
RS10055 |
Unspecified |
| scaffold5133 |
68172 |
68306 |
+ |
RS15547 |
Unspecified |
| scaffold5133 |
68728 |
68908 |
- |
RS84 |
Unspecified |
| scaffold5133 |
68907 |
69000 |
- |
RS16382 |
Unspecified |
| scaffold5133 |
68999 |
69066 |
- |
RS18371 |
Unspecified |
| scaffold5133 |
69182 |
69299 |
+ |
RS6395 |
Unspecified |
| scaffold5133 |
69455 |
69616 |
+ |
RS35 |
Unspecified |
| scaffold5133 |
69615 |
69878 |
- |
RS356 |
Unspecified |
| scaffold5133 |
69877 |
70180 |
+ |
PL352 |
Unspecified |
| scaffold5133 |
70558 |
70671 |
- |
RS14526 |
Unspecified |
| scaffold5133 |
70727 |
70778 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5133 |
71032 |
71083 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5133 |
71134 |
71241 |
- |
RS10879 |
Unspecified |
| scaffold5133 |
72269 |
72484 |
- |
RS16305 |
Unspecified |
| scaffold5133 |
72544 |
72567 |
+ |
(T)n |
Simple_repeat |
| scaffold5133 |
72582 |
72668 |
- |
RS17 |
Unspecified |
| scaffold5133 |
72653 |
72696 |
- |
PL560 |
Unspecified |
| scaffold5133 |
72674 |
72739 |
+ |
RS18111 |
Unspecified |