scaffold534 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold534 |
1 |
40 |
+ |
RS48 |
Unspecified |
| scaffold534 |
32 |
1225 |
- |
RS259 |
Unspecified |
| scaffold534 |
1224 |
1392 |
- |
RS271 |
Unspecified |
| scaffold534 |
1387 |
1878 |
+ |
COP2_I_MT-int |
LTR/Copia |
| scaffold534 |
2229 |
2298 |
+ |
COP2_I_MT-int |
LTR/Copia |
| scaffold534 |
2350 |
2381 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold534 |
2541 |
2797 |
+ |
Copia-88_VV-I |
LTR/Copia |
| scaffold534 |
6597 |
7050 |
- |
RS314 |
Unspecified |
| scaffold534 |
7956 |
8008 |
+ |
(ATT)n |
Simple_repeat |
| scaffold534 |
8312 |
8494 |
+ |
(TTA)n |
Simple_repeat |
| scaffold534 |
9433 |
9487 |
+ |
(TTA)n |
Simple_repeat |
| scaffold534 |
9572 |
9595 |
+ |
(TAT)n |
Simple_repeat |
| scaffold534 |
9953 |
9977 |
+ |
(AG)n |
Simple_repeat |
| scaffold534 |
10040 |
10085 |
+ |
(TTTGGGCC)n |
Simple_repeat |
| scaffold534 |
10161 |
10825 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold534 |
11112 |
11132 |
+ |
(A)n |
Simple_repeat |
| scaffold534 |
11451 |
11495 |
+ |
(TTTTTCC)n |
Simple_repeat |
| scaffold534 |
13227 |
13320 |
- |
TAM2_AM |
DNA/En-Spm |
| scaffold534 |
13315 |
13541 |
- |
RS10316 |
Unspecified |
| scaffold534 |
15578 |
15596 |
+ |
(T)n |
Simple_repeat |
| scaffold534 |
15649 |
15797 |
- |
TAM2_AM |
DNA/En-Spm |
| scaffold534 |
16735 |
17145 |
- |
RS1535 |
Unspecified |
| scaffold534 |
17794 |
17811 |
+ |
(T)n |
Simple_repeat |
| scaffold534 |
20427 |
20528 |
- |
PL567 |
Unspecified |
| scaffold534 |
20441 |
20813 |
+ |
RS2034 |
Unspecified |
| scaffold534 |
21416 |
21506 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold534 |
21774 |
21864 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold534 |
23646 |
23662 |
+ |
(T)n |
Simple_repeat |
| scaffold534 |
25606 |
25635 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
28270 |
28288 |
+ |
(A)n |
Simple_repeat |
| scaffold534 |
28502 |
28593 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold534 |
30261 |
30302 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
30322 |
30377 |
+ |
Helitron5 |
RC/Helitron |
| scaffold534 |
31705 |
31736 |
+ |
(A)n |
Simple_repeat |
| scaffold534 |
33997 |
34027 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold534 |
34531 |
34574 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold534 |
34668 |
34711 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold534 |
34823 |
34882 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold534 |
35670 |
36122 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold534 |
37966 |
38016 |
+ |
(AC)n |
Simple_repeat |
| scaffold534 |
39513 |
40326 |
+ |
RS5577 |
Unspecified |
| scaffold534 |
40497 |
40852 |
+ |
RS2947 |
Unspecified |
| scaffold534 |
42189 |
42750 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
42189 |
42384 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
42343 |
42750 |
+ |
RS8359 |
Unspecified |
| scaffold534 |
42425 |
42885 |
+ |
RS192 |
Unspecified |
| scaffold534 |
42951 |
43432 |
+ |
RS4231 |
Unspecified |
| scaffold534 |
43095 |
44148 |
- |
RS1381 |
Unspecified |
| scaffold534 |
43735 |
44251 |
- |
RS166 |
Unspecified |
| scaffold534 |
44242 |
44306 |
- |
PL725 |
Unspecified |
| scaffold534 |
44296 |
45965 |
+ |
PL124 |
Unspecified |
| scaffold534 |
45965 |
46010 |
- |
PL725 |
Unspecified |
| scaffold534 |
46142 |
46174 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold534 |
46208 |
46258 |
+ |
(GTATCG)n |
Simple_repeat |
| scaffold534 |
46268 |
46501 |
- |
RS166 |
Unspecified |
| scaffold534 |
46437 |
47015 |
+ |
RS706 |
Unspecified |
| scaffold534 |
48028 |
48058 |
+ |
(GCATAT)n |
Simple_repeat |
| scaffold534 |
48265 |
48305 |
+ |
(CACAAG)n |
Simple_repeat |
| scaffold534 |
49404 |
49454 |
+ |
(AC)n |
Simple_repeat |
| scaffold534 |
50297 |
50712 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold534 |
50712 |
50876 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold534 |
51545 |
51584 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
52195 |
52228 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold534 |
52472 |
52814 |
- |
RS5779 |
Unspecified |
| scaffold534 |
53330 |
53377 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
54064 |
54118 |
+ |
(TTAAGGA)n |
Simple_repeat |
| scaffold534 |
54171 |
54200 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold534 |
54550 |
54589 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
54628 |
54823 |
- |
RS13143 |
Unspecified |
| scaffold534 |
54999 |
55082 |
- |
RS2367 |
Unspecified |
| scaffold534 |
55121 |
55363 |
+ |
GA-rich |
Low_complexity |
| scaffold534 |
55306 |
55363 |
+ |
GA-rich |
Low_complexity |
| scaffold534 |
55462 |
55576 |
- |
RS1919 |
Unspecified |
| scaffold534 |
55484 |
55726 |
- |
RS1919 |
Unspecified |
| scaffold534 |
56625 |
57121 |
+ |
Helitron2_ZM |
RC/Helitron |
| scaffold534 |
57164 |
57208 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold534 |
57391 |
57764 |
+ |
PL175 |
Unspecified |
| scaffold534 |
59313 |
59377 |
+ |
(TGT)n |
Simple_repeat |
| scaffold534 |
59542 |
60256 |
+ |
RS540 |
Unspecified |
| scaffold534 |
59621 |
60677 |
- |
RS44 |
Unspecified |
| scaffold534 |
59869 |
60677 |
- |
RS878 |
Unspecified |
| scaffold534 |
63034 |
63078 |
+ |
(GATCTTT)n |
Simple_repeat |
| scaffold534 |
63108 |
63175 |
- |
RS76 |
Unspecified |
| scaffold534 |
63175 |
63401 |
+ |
PL683 |
Unspecified |
| scaffold534 |
63505 |
63536 |
+ |
A-rich |
Low_complexity |
| scaffold534 |
63866 |
64563 |
+ |
RS446 |
Unspecified |
| scaffold534 |
66004 |
69612 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold534 |
66012 |
67571 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold534 |
67766 |
69200 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold534 |
70061 |
70092 |
+ |
GA-rich |
Low_complexity |
| scaffold534 |
70821 |
70853 |
+ |
(CATCTT)n |
Simple_repeat |
| scaffold534 |
73169 |
73428 |
- |
RS21 |
Unspecified |
| scaffold534 |
73691 |
74070 |
+ |
RS29 |
Unspecified |
| scaffold534 |
74084 |
74349 |
- |
RS986 |
Unspecified |
| scaffold534 |
74167 |
74388 |
- |
RS1358 |
Unspecified |
| scaffold534 |
74400 |
74708 |
+ |
RS6608 |
Unspecified |
| scaffold534 |
132250 |
132266 |
+ |
(T)n |
Simple_repeat |