scaffold5355 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5355 |
252 |
592 |
+ |
PL956 |
Unspecified |
| scaffold5355 |
1997 |
2290 |
+ |
PL931 |
Unspecified |
| scaffold5355 |
2487 |
2671 |
+ |
RS325 |
Unspecified |
| scaffold5355 |
4263 |
4292 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
4459 |
4489 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
5236 |
5265 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
5251 |
5312 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5355 |
5314 |
5473 |
- |
RS4164 |
Unspecified |
| scaffold5355 |
5733 |
5783 |
+ |
(AATT)n |
Simple_repeat |
| scaffold5355 |
6045 |
6088 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5355 |
6542 |
6806 |
- |
RS356 |
Unspecified |
| scaffold5355 |
6799 |
6920 |
+ |
RS6180 |
Unspecified |
| scaffold5355 |
6808 |
6910 |
- |
RS2752 |
Unspecified |
| scaffold5355 |
7280 |
7513 |
- |
RS1492 |
Unspecified |
| scaffold5355 |
7711 |
7780 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
7801 |
7964 |
+ |
PL699 |
Unspecified |
| scaffold5355 |
8484 |
8534 |
+ |
(GGT)n |
Simple_repeat |
| scaffold5355 |
8577 |
8715 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5355 |
8666 |
8715 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5355 |
8939 |
9295 |
+ |
RS6506 |
Unspecified |
| scaffold5355 |
10901 |
11405 |
- |
RS2941 |
Unspecified |
| scaffold5355 |
11300 |
11556 |
- |
RS4801 |
Unspecified |
| scaffold5355 |
11499 |
11611 |
- |
RS8454 |
Unspecified |
| scaffold5355 |
11694 |
11853 |
- |
RS5762 |
Unspecified |
| scaffold5355 |
11888 |
11915 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold5355 |
12266 |
12404 |
- |
RS610 |
Unspecified |
| scaffold5355 |
12792 |
12899 |
+ |
RS12254 |
Unspecified |
| scaffold5355 |
12805 |
13017 |
+ |
RS18 |
Unspecified |
| scaffold5355 |
13071 |
13102 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
13103 |
13207 |
- |
RS1829 |
Unspecified |
| scaffold5355 |
13210 |
13302 |
- |
RS86 |
Unspecified |
| scaffold5355 |
13576 |
14137 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold5355 |
14232 |
16166 |
+ |
Copia-4_SL-I |
LTR/Copia |
| scaffold5355 |
16178 |
17247 |
+ |
Copia-4_SL-I |
LTR/Copia |
| scaffold5355 |
17306 |
19153 |
+ |
Copia-4_SL-I |
LTR/Copia |
| scaffold5355 |
19331 |
19888 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold5355 |
20103 |
20661 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold5355 |
21952 |
21975 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5355 |
22360 |
26891 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold5355 |
27385 |
27433 |
+ |
(CATAATA)n |
Simple_repeat |
| scaffold5355 |
27990 |
28053 |
+ |
(TG)n |
Simple_repeat |
| scaffold5355 |
28233 |
30283 |
- |
RS215 |
Unspecified |
| scaffold5355 |
30425 |
30476 |
- |
RS10 |
Unspecified |
| scaffold5355 |
30432 |
30700 |
+ |
RS10 |
Unspecified |
| scaffold5355 |
30702 |
30770 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold5355 |
31016 |
31081 |
+ |
A-rich |
Low_complexity |
| scaffold5355 |
31133 |
31375 |
+ |
RS16888 |
Unspecified |
| scaffold5355 |
31381 |
31891 |
- |
RS5561 |
Unspecified |
| scaffold5355 |
32256 |
32291 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
32694 |
32735 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold5355 |
32794 |
32855 |
+ |
(AAGTGAA)n |
Simple_repeat |
| scaffold5355 |
32965 |
33075 |
- |
RS80 |
Unspecified |
| scaffold5355 |
33047 |
33412 |
+ |
RS3877 |
Unspecified |
| scaffold5355 |
33414 |
33576 |
- |
RS5561 |
Unspecified |
| scaffold5355 |
33578 |
33899 |
+ |
PL639 |
Unspecified |
| scaffold5355 |
33578 |
33834 |
+ |
RS1615 |
Unspecified |
| scaffold5355 |
33883 |
34152 |
- |
PL490 |
Unspecified |
| scaffold5355 |
34194 |
34570 |
+ |
RS8 |
Unspecified |
| scaffold5355 |
34635 |
34970 |
+ |
RS72 |
Unspecified |
| scaffold5355 |
34969 |
35033 |
+ |
ATHAT3 |
DNA/hAT-Ac |
| scaffold5355 |
34971 |
35049 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5355 |
35290 |
35345 |
+ |
(TACATATG)n |
Simple_repeat |
| scaffold5355 |
35412 |
35527 |
+ |
(CCCGAA)n |
Simple_repeat |
| scaffold5355 |
35541 |
35768 |
+ |
RS72 |
Unspecified |
| scaffold5355 |
35798 |
36247 |
+ |
PL352 |
Unspecified |
| scaffold5355 |
36307 |
36758 |
- |
PL270 |
Unspecified |
| scaffold5355 |
37303 |
37325 |
+ |
(A)n |
Simple_repeat |
| scaffold5355 |
38811 |
38886 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
42945 |
43016 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold5355 |
43084 |
43252 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5355 |
43341 |
43436 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5355 |
44287 |
44315 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5355 |
45161 |
45198 |
+ |
G-rich |
Low_complexity |
| scaffold5355 |
47174 |
47216 |
+ |
(TGTTATT)n |
Simple_repeat |
| scaffold5355 |
49123 |
49220 |
+ |
RS3146 |
Unspecified |
| scaffold5355 |
49131 |
49231 |
- |
RS15113 |
Unspecified |
| scaffold5355 |
49406 |
49430 |
+ |
(T)n |
Simple_repeat |
| scaffold5355 |
50344 |
52506 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold5355 |
50552 |
51536 |
- |
L1-1_GM |
LINE/L1 |
| scaffold5355 |
51689 |
51807 |
- |
L1-4_STu |
LINE/L1 |
| scaffold5355 |
56134 |
56590 |
- |
RS688 |
Unspecified |
| scaffold5355 |
56591 |
56919 |
+ |
PL743 |
Unspecified |
| scaffold5355 |
57048 |
57081 |
+ |
(GTTCT)n |
Simple_repeat |
| scaffold5355 |
59125 |
59175 |
+ |
A-rich |
Low_complexity |
| scaffold5355 |
59393 |
59518 |
- |
RS4068 |
Unspecified |
| scaffold5355 |
60644 |
60670 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5355 |
61874 |
62081 |
+ |
RS13321 |
Unspecified |
| scaffold5355 |
62445 |
62559 |
- |
RS13850 |
Unspecified |
| scaffold5355 |
62561 |
62790 |
+ |
RIRE1_I-int |
LTR/Copia |