scaffold5424 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5424 |
83 |
115 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold5424 |
330 |
488 |
+ |
RS14888 |
Unspecified |
| scaffold5424 |
1858 |
2485 |
- |
RS1868 |
Unspecified |
| scaffold5424 |
2407 |
2668 |
+ |
RS4359 |
Unspecified |
| scaffold5424 |
3022 |
3195 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5424 |
3184 |
3372 |
- |
RS892 |
Unspecified |
| scaffold5424 |
4632 |
4861 |
- |
RS1298 |
Unspecified |
| scaffold5424 |
5159 |
5714 |
+ |
PL301 |
Unspecified |
| scaffold5424 |
6149 |
6206 |
+ |
(CTC)n |
Simple_repeat |
| scaffold5424 |
7544 |
7571 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold5424 |
11059 |
11151 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
12799 |
12843 |
+ |
(GAT)n |
Simple_repeat |
| scaffold5424 |
16224 |
16550 |
- |
RS2528 |
Unspecified |
| scaffold5424 |
16878 |
16919 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold5424 |
16878 |
17288 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold5424 |
16905 |
17288 |
- |
RS1610 |
Unspecified |
| scaffold5424 |
17516 |
17608 |
+ |
RS14705 |
Unspecified |
| scaffold5424 |
17606 |
17717 |
+ |
RS1484 |
Unspecified |
| scaffold5424 |
17809 |
18301 |
+ |
RS7342 |
Unspecified |
| scaffold5424 |
18292 |
18397 |
- |
PL53 |
Unspecified |
| scaffold5424 |
20229 |
20258 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
20297 |
20455 |
- |
RS280 |
Unspecified |
| scaffold5424 |
20305 |
20474 |
- |
PL609 |
Unspecified |
| scaffold5424 |
20543 |
20604 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold5424 |
20657 |
20831 |
- |
PL124 |
Unspecified |
| scaffold5424 |
21000 |
21042 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
21474 |
21896 |
+ |
RS1701 |
Unspecified |
| scaffold5424 |
21895 |
21987 |
- |
RS4475 |
Unspecified |
| scaffold5424 |
21985 |
22122 |
- |
PL232 |
Unspecified |
| scaffold5424 |
21985 |
22098 |
+ |
RS1701 |
Unspecified |
| scaffold5424 |
22412 |
22439 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
22536 |
22704 |
+ |
RS10 |
Unspecified |
| scaffold5424 |
22933 |
23061 |
+ |
(CGCCGT)n |
Simple_repeat |
| scaffold5424 |
23004 |
23062 |
+ |
(CGC)n |
Simple_repeat |
| scaffold5424 |
23352 |
23379 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
25730 |
25779 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
27167 |
27278 |
- |
RS1101 |
Unspecified |
| scaffold5424 |
29939 |
30742 |
- |
Gypsy-5_BRa-I |
LTR/Gypsy |
| scaffold5424 |
30737 |
30858 |
- |
PL670 |
Unspecified |
| scaffold5424 |
30863 |
31448 |
- |
Gypsy-5_BRa-I |
LTR/Gypsy |
| scaffold5424 |
31460 |
31530 |
- |
Gypsy-36_BRa-I |
LTR/Gypsy |
| scaffold5424 |
31673 |
32139 |
- |
Gypsy-36_BRa-I |
LTR/Gypsy |
| scaffold5424 |
32229 |
32305 |
- |
Gypsy-36_BRa-I |
LTR/Gypsy |
| scaffold5424 |
32494 |
32797 |
- |
Gypsy-36_BRa-I |
LTR/Gypsy |
| scaffold5424 |
32822 |
32986 |
- |
Gypsy-17_ST-I |
LTR/Gypsy |
| scaffold5424 |
33305 |
33428 |
+ |
RS9238 |
Unspecified |
| scaffold5424 |
33554 |
33669 |
+ |
RS9238 |
Unspecified |
| scaffold5424 |
34229 |
34271 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
34352 |
34693 |
- |
RS290 |
Unspecified |
| scaffold5424 |
34696 |
34724 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold5424 |
34759 |
35080 |
+ |
RS42 |
Unspecified |
| scaffold5424 |
36857 |
38093 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold5424 |
38132 |
38511 |
- |
RS489 |
Unspecified |
| scaffold5424 |
38513 |
38670 |
- |
RS295 |
Unspecified |
| scaffold5424 |
39085 |
39291 |
- |
PL292 |
Unspecified |
| scaffold5424 |
39270 |
39347 |
- |
RS489 |
Unspecified |
| scaffold5424 |
39342 |
39990 |
+ |
RS3423 |
Unspecified |
| scaffold5424 |
40016 |
40188 |
+ |
PL318 |
Unspecified |
| scaffold5424 |
41662 |
41783 |
- |
PL111 |
Unspecified |
| scaffold5424 |
41783 |
41832 |
- |
PL29 |
Unspecified |
| scaffold5424 |
41783 |
41839 |
+ |
PL570 |
Unspecified |
| scaffold5424 |
41832 |
42214 |
- |
RS489 |
Unspecified |
| scaffold5424 |
42303 |
42366 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
43738 |
43782 |
+ |
(TGATTTG)n |
Simple_repeat |
| scaffold5424 |
44475 |
45316 |
+ |
RS265 |
Unspecified |
| scaffold5424 |
47347 |
48021 |
+ |
RS265 |
Unspecified |
| scaffold5424 |
48589 |
48617 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold5424 |
49181 |
49473 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
49434 |
49473 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
49714 |
49738 |
+ |
(CAAATT)n |
Simple_repeat |
| scaffold5424 |
49784 |
49871 |
+ |
RS4 |
Unspecified |
| scaffold5424 |
50186 |
50237 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
50341 |
50363 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5424 |
50643 |
50667 |
+ |
(A)n |
Simple_repeat |
| scaffold5424 |
51022 |
51058 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold5424 |
53800 |
53818 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
53905 |
53945 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5424 |
63864 |
63996 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5424 |
64075 |
64243 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5424 |
64787 |
64851 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold5424 |
65422 |
65533 |
- |
RS2892 |
Unspecified |
| scaffold5424 |
65796 |
65842 |
+ |
(CTTTTTC)n |
Simple_repeat |
| scaffold5424 |
66071 |
66313 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5424 |
66497 |
66752 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5424 |
67087 |
67159 |
+ |
(TTCTTC)n |
Simple_repeat |
| scaffold5424 |
67163 |
67194 |
+ |
(TCC)n |
Simple_repeat |
| scaffold5424 |
67899 |
67939 |
+ |
(TCC)n |
Simple_repeat |
| scaffold5424 |
69346 |
69472 |
+ |
RS10164 |
Unspecified |
| scaffold5424 |
69582 |
69636 |
+ |
(TTT)n |
Simple_repeat |
| scaffold5424 |
69873 |
69941 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
69942 |
69976 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold5424 |
71646 |
71837 |
- |
RS12248 |
Unspecified |
| scaffold5424 |
71983 |
72024 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
72087 |
72235 |
+ |
RS10643 |
Unspecified |
| scaffold5424 |
72450 |
72764 |
- |
RS3498 |
Unspecified |
| scaffold5424 |
72629 |
72868 |
- |
RS8845 |
Unspecified |
| scaffold5424 |
72999 |
73094 |
- |
RS7630 |
Unspecified |
| scaffold5424 |
73234 |
73286 |
- |
RS3498 |
Unspecified |
| scaffold5424 |
73450 |
73480 |
+ |
GA-rich |
Low_complexity |
| scaffold5424 |
74448 |
74533 |
+ |
(TT)n |
Simple_repeat |
| scaffold5424 |
74611 |
74647 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold5424 |
76190 |
76230 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
76899 |
76939 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold5424 |
77085 |
77156 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold5424 |
77350 |
77373 |
+ |
(A)n |
Simple_repeat |
| scaffold5424 |
77578 |
78049 |
- |
PL347 |
Unspecified |
| scaffold5424 |
78152 |
78184 |
+ |
(CCTT)n |
Simple_repeat |
| scaffold5424 |
78429 |
78479 |
+ |
(TCCT)n |
Simple_repeat |
| scaffold5424 |
81595 |
81618 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5424 |
81672 |
81704 |
+ |
(AAGAGAA)n |
Simple_repeat |
| scaffold5424 |
84254 |
84294 |
+ |
(AACTTAG)n |
Simple_repeat |
| scaffold5424 |
86608 |
86835 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5424 |
88943 |
88972 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
89804 |
89829 |
+ |
(A)n |
Simple_repeat |
| scaffold5424 |
89916 |
89955 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
93933 |
93978 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold5424 |
94187 |
94269 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold5424 |
94506 |
94522 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold5424 |
94523 |
94570 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5424 |
94937 |
94959 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5424 |
95682 |
95708 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5424 |
96109 |
96261 |
+ |
RS126 |
Unspecified |
| scaffold5424 |
97874 |
98022 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5424 |
98007 |
98145 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5424 |
99198 |
99250 |
+ |
(GGT)n |
Simple_repeat |
| scaffold5424 |
99426 |
99466 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
99668 |
99703 |
+ |
(T)n |
Simple_repeat |
| scaffold5424 |
99790 |
99886 |
- |
Athila8A_I-int |
LTR/Gypsy |
| scaffold5424 |
99840 |
99893 |
- |
Alfare1_I-int |
LTR/Copia? |
| scaffold5424 |
100368 |
100425 |
+ |
(ATC)n |
Simple_repeat |
| scaffold5424 |
101020 |
101112 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold5424 |
101086 |
101117 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5424 |
101086 |
102328 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5424 |
101110 |
102328 |
+ |
RS126 |
Unspecified |
| scaffold5424 |
102819 |
103407 |
- |
RS132 |
Unspecified |
| scaffold5424 |
104226 |
104472 |
+ |
RS777 |
Unspecified |
| scaffold5424 |
105031 |
105055 |
+ |
(A)n |
Simple_repeat |
| scaffold5424 |
106975 |
107013 |
+ |
(TT)n |
Simple_repeat |
| scaffold5424 |
107659 |
107869 |
- |
HAT-3_Mad |
DNA/hAT-Tip100 |
| scaffold5424 |
107981 |
108011 |
+ |
(A)n |
Simple_repeat |
| scaffold5424 |
108297 |
109107 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold5424 |
109263 |
110156 |
+ |
PL532 |
Unspecified |
| scaffold5424 |
110282 |
110316 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5424 |
110346 |
110653 |
+ |
RS266 |
Unspecified |
| scaffold5424 |
110498 |
110712 |
+ |
RS69 |
Unspecified |
| scaffold5424 |
110725 |
111308 |
- |
PL836 |
Unspecified |
| scaffold5424 |
111824 |
111876 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5424 |
112091 |
112119 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold5424 |
112323 |
112383 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5424 |
113156 |
113210 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5424 |
113601 |
113648 |
+ |
(AGTAATA)n |
Simple_repeat |
| scaffold5424 |
116478 |
116551 |
+ |
(ACGAA)n |
Simple_repeat |
| scaffold5424 |
116817 |
116853 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
118192 |
118228 |
+ |
A-rich |
Low_complexity |
| scaffold5424 |
118742 |
119345 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5424 |
119521 |
120149 |
+ |
RS661 |
Unspecified |
| scaffold5424 |
119605 |
120244 |
+ |
RS1207 |
Unspecified |
| scaffold5424 |
120484 |
120811 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5424 |
121283 |
121309 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5424 |
123028 |
123083 |
+ |
(TTATGC)n |
Simple_repeat |
| scaffold5424 |
123142 |
123858 |
+ |
RS695 |
Unspecified |
| scaffold5424 |
123215 |
123851 |
+ |
PL489 |
Unspecified |
| scaffold5424 |
124591 |
124834 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5424 |
124659 |
124855 |
+ |
ATCOPIN_LTR |
LTR |