scaffold5425 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5425 |
755 |
1737 |
+ |
PL956 |
Unspecified |
| scaffold5425 |
1950 |
3417 |
- |
RS254 |
Unspecified |
| scaffold5425 |
3758 |
3906 |
- |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold5425 |
3954 |
4000 |
+ |
(TGAGT)n |
Simple_repeat |
| scaffold5425 |
10708 |
10766 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold5425 |
10844 |
10863 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
11904 |
12893 |
+ |
PL193 |
Unspecified |
| scaffold5425 |
12916 |
12987 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5425 |
13348 |
13466 |
+ |
PL294 |
Unspecified |
| scaffold5425 |
17917 |
17963 |
+ |
PL470 |
Unspecified |
| scaffold5425 |
17917 |
17999 |
+ |
PL171 |
Unspecified |
| scaffold5425 |
17956 |
18045 |
+ |
PL470 |
Unspecified |
| scaffold5425 |
18115 |
18211 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5425 |
19149 |
19398 |
+ |
RS606 |
Unspecified |
| scaffold5425 |
19395 |
19568 |
+ |
RS2892 |
Unspecified |
| scaffold5425 |
19603 |
19693 |
+ |
(CATCTT)n |
Simple_repeat |
| scaffold5425 |
19654 |
19698 |
+ |
(TCGTCT)n |
Simple_repeat |
| scaffold5425 |
21181 |
21220 |
+ |
(AG)n |
Simple_repeat |
| scaffold5425 |
21502 |
21720 |
+ |
RS5346 |
Unspecified |
| scaffold5425 |
21743 |
21949 |
- |
PL386 |
Unspecified |
| scaffold5425 |
23113 |
24202 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5425 |
23899 |
23952 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5425 |
24654 |
25140 |
+ |
(AATATAC)n |
Simple_repeat |
| scaffold5425 |
25102 |
25140 |
+ |
(AATATAC)n |
Simple_repeat |
| scaffold5425 |
25449 |
25489 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
25541 |
25566 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
25780 |
26149 |
- |
RS7167 |
Unspecified |
| scaffold5425 |
26623 |
26694 |
+ |
(ATAATGA)n |
Simple_repeat |
| scaffold5425 |
27156 |
27433 |
- |
RS6064 |
Unspecified |
| scaffold5425 |
27409 |
27631 |
+ |
RS13169 |
Unspecified |
| scaffold5425 |
28588 |
28615 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold5425 |
29451 |
29501 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold5425 |
29502 |
29516 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold5425 |
31293 |
31590 |
- |
RS3905 |
Unspecified |
| scaffold5425 |
31920 |
32083 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5425 |
32238 |
32400 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5425 |
32498 |
32774 |
- |
PL606 |
Unspecified |
| scaffold5425 |
33253 |
33314 |
+ |
(AATGA)n |
Simple_repeat |
| scaffold5425 |
33448 |
33469 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5425 |
35057 |
35085 |
+ |
G-rich |
Low_complexity |
| scaffold5425 |
36437 |
36490 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5425 |
38123 |
38308 |
+ |
RS178 |
Unspecified |
| scaffold5425 |
38550 |
38714 |
+ |
RS347 |
Unspecified |
| scaffold5425 |
38751 |
38786 |
+ |
(TCTTTTTTT)n |
Simple_repeat |
| scaffold5425 |
39457 |
39502 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
41365 |
41386 |
+ |
(T)n |
Simple_repeat |
| scaffold5425 |
41585 |
41649 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5425 |
43257 |
43363 |
+ |
RS17 |
Unspecified |
| scaffold5425 |
44949 |
45175 |
- |
PL131 |
Unspecified |
| scaffold5425 |
45238 |
45426 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold5425 |
45578 |
47258 |
- |
RS254 |
Unspecified |
| scaffold5425 |
47332 |
47375 |
+ |
(GATAC)n |
Simple_repeat |
| scaffold5425 |
47538 |
47556 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
49795 |
49841 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5425 |
50058 |
50114 |
+ |
(GTAACTT)n |
Simple_repeat |
| scaffold5425 |
50207 |
50231 |
+ |
(T)n |
Simple_repeat |
| scaffold5425 |
51508 |
52221 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5425 |
52526 |
55602 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5425 |
56423 |
56466 |
+ |
GA-rich |
Low_complexity |
| scaffold5425 |
56700 |
56972 |
- |
RS342 |
Unspecified |
| scaffold5425 |
57290 |
57442 |
+ |
RS5187 |
Unspecified |
| scaffold5425 |
57755 |
57990 |
+ |
RS15131 |
Unspecified |
| scaffold5425 |
59305 |
59460 |
- |
RS3663 |
Unspecified |
| scaffold5425 |
59449 |
59741 |
- |
RS10737 |
Unspecified |
| scaffold5425 |
59830 |
59900 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5425 |
59902 |
59958 |
+ |
G-rich |
Low_complexity |
| scaffold5425 |
61029 |
61059 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
61310 |
61409 |
+ |
RS17195 |
Unspecified |
| scaffold5425 |
62053 |
62205 |
+ |
RS15810 |
Unspecified |
| scaffold5425 |
63509 |
63830 |
- |
RS1414 |
Unspecified |
| scaffold5425 |
63833 |
63867 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
64216 |
64253 |
+ |
(TCACAA)n |
Simple_repeat |
| scaffold5425 |
64506 |
64522 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
65172 |
65365 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5425 |
66913 |
66946 |
+ |
(T)n |
Simple_repeat |
| scaffold5425 |
69276 |
69310 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5425 |
69633 |
69697 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
70122 |
70150 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
70190 |
70598 |
+ |
RS2626 |
Unspecified |
| scaffold5425 |
70849 |
70910 |
+ |
(ATTGGTT)n |
Simple_repeat |
| scaffold5425 |
71953 |
71992 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5425 |
72395 |
72421 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
73125 |
73182 |
+ |
GA-rich |
Low_complexity |
| scaffold5425 |
73461 |
73503 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
74439 |
74493 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5425 |
74585 |
75225 |
- |
PL8 |
Unspecified |
| scaffold5425 |
75526 |
75640 |
+ |
RS65 |
Unspecified |
| scaffold5425 |
75639 |
75869 |
+ |
RS5132 |
Unspecified |
| scaffold5425 |
76483 |
76503 |
+ |
(A)n |
Simple_repeat |
| scaffold5425 |
76552 |
76573 |
+ |
(CAC)n |
Simple_repeat |
| scaffold5425 |
77548 |
77587 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5425 |
78138 |
78174 |
+ |
A-rich |
Low_complexity |
| scaffold5425 |
78280 |
78451 |
- |
RS179 |
Unspecified |
| scaffold5425 |
78907 |
78960 |
+ |
(T)n |
Simple_repeat |
| scaffold5425 |
79825 |
79873 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold5425 |
80070 |
80149 |
+ |
(AATTATA)n |
Simple_repeat |
| scaffold5425 |
80400 |
80533 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5425 |
80611 |
80656 |
+ |
(CT)n |
Simple_repeat |
| scaffold5425 |
80799 |
80989 |
- |
RS4933 |
Unspecified |
| scaffold5425 |
80846 |
81006 |
+ |
RS4582 |
Unspecified |
| scaffold5425 |
80874 |
81041 |
+ |
RS1357 |
Unspecified |
| scaffold5425 |
81117 |
81130 |
+ |
(TTTCGA)n |
Simple_repeat |
| scaffold5425 |
81131 |
81167 |
+ |
(TTTCG)n |
Simple_repeat |
| scaffold5425 |
81168 |
81210 |
+ |
(TTTCGA)n |
Simple_repeat |
| scaffold5425 |
81418 |
81439 |
+ |
(AATT)n |
Simple_repeat |
| scaffold5425 |
81548 |
81630 |
- |
RS8684 |
Unspecified |
| scaffold5425 |
81987 |
82053 |
+ |
A-rich |
Low_complexity |