scaffold5426 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5426 |
709 |
790 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold5426 |
4556 |
4646 |
+ |
RS118 |
Unspecified |
| scaffold5426 |
4826 |
4957 |
+ |
RS11551 |
Unspecified |
| scaffold5426 |
6325 |
6364 |
+ |
(TG)n |
Simple_repeat |
| scaffold5426 |
7359 |
7525 |
+ |
RS24 |
Unspecified |
| scaffold5426 |
7538 |
7801 |
- |
RS365 |
Unspecified |
| scaffold5426 |
8802 |
9435 |
- |
L1-5_STu |
LINE/L1 |
| scaffold5426 |
9592 |
9681 |
+ |
(GACCCA)n |
Simple_repeat |
| scaffold5426 |
9825 |
9873 |
+ |
(ACTGAAG)n |
Simple_repeat |
| scaffold5426 |
10040 |
10095 |
+ |
(AGACCC)n |
Simple_repeat |
| scaffold5426 |
10133 |
10163 |
+ |
G-rich |
Low_complexity |
| scaffold5426 |
10176 |
11096 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold5426 |
10222 |
10804 |
- |
ATLINE1_11 |
LINE/L1 |
| scaffold5426 |
10994 |
11085 |
- |
L1-3_GM |
LINE/L1 |
| scaffold5426 |
11266 |
11388 |
- |
SHALINE7_MT |
LINE/L1 |
| scaffold5426 |
11676 |
11720 |
- |
L1-10_STu |
LINE/L1 |
| scaffold5426 |
11995 |
12114 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold5426 |
12299 |
13274 |
+ |
PL563 |
Unspecified |
| scaffold5426 |
13841 |
14614 |
- |
ATLINEIII |
LINE/L1 |
| scaffold5426 |
14748 |
14854 |
- |
Isabelle_TM |
LINE/L1 |
| scaffold5426 |
14854 |
15369 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold5426 |
16147 |
16359 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold5426 |
16582 |
16648 |
+ |
(AATAATG)n |
Simple_repeat |
| scaffold5426 |
16810 |
16847 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold5426 |
18140 |
18178 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5426 |
18587 |
18648 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold5426 |
18849 |
18910 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold5426 |
19187 |
19242 |
+ |
A-rich |
Low_complexity |
| scaffold5426 |
19323 |
19360 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold5426 |
19628 |
20149 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold5426 |
19782 |
20149 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold5426 |
20167 |
21352 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold5426 |
21386 |
22201 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold5426 |
22417 |
23028 |
- |
PL675 |
Unspecified |
| scaffold5426 |
25591 |
25644 |
+ |
(ATATCCA)n |
Simple_repeat |
| scaffold5426 |
25707 |
25748 |
+ |
(TCGAATT)n |
Simple_repeat |
| scaffold5426 |
26644 |
26681 |
+ |
(TATT)n |
Simple_repeat |
| scaffold5426 |
26799 |
26840 |
+ |
A-rich |
Low_complexity |
| scaffold5426 |
29508 |
29549 |
+ |
(ATATG)n |
Simple_repeat |
| scaffold5426 |
29963 |
30049 |
+ |
(T)n |
Simple_repeat |
| scaffold5426 |
29995 |
30049 |
+ |
(T)n |
Simple_repeat |
| scaffold5426 |
31338 |
31490 |
- |
PL735 |
Unspecified |
| scaffold5426 |
31625 |
31641 |
+ |
(A)n |
Simple_repeat |
| scaffold5426 |
32363 |
32825 |
+ |
RS3843 |
Unspecified |
| scaffold5426 |
33011 |
33344 |
+ |
RS1436 |
Unspecified |
| scaffold5426 |
33406 |
33580 |
- |
RS1362 |
Unspecified |
| scaffold5426 |
33729 |
33975 |
- |
RS581 |
Unspecified |
| scaffold5426 |
34416 |
34590 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5426 |
34596 |
34615 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5426 |
34616 |
34707 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5426 |
34702 |
34797 |
+ |
RS254 |
Unspecified |
| scaffold5426 |
34922 |
35185 |
- |
RS29 |
Unspecified |
| scaffold5426 |
35333 |
35375 |
+ |
A-rich |
Low_complexity |
| scaffold5426 |
35484 |
35526 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5426 |
36897 |
36902 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5426 |
36903 |
36934 |
+ |
(A)n |
Simple_repeat |
| scaffold5426 |
36935 |
36960 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5426 |
37302 |
37480 |
+ |
RS38 |
Unspecified |
| scaffold5426 |
38566 |
38730 |
- |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold5426 |
40588 |
40633 |
+ |
(CT)n |
Simple_repeat |
| scaffold5426 |
40663 |
40794 |
+ |
RS4014 |
Unspecified |
| scaffold5426 |
40715 |
40981 |
- |
RS8394 |
Unspecified |
| scaffold5426 |
42023 |
42947 |
+ |
RS658 |
Unspecified |
| scaffold5426 |
42023 |
42772 |
+ |
RS2516 |
Unspecified |
| scaffold5426 |
42947 |
44011 |
- |
RS646 |
Unspecified |
| scaffold5426 |
44911 |
44984 |
+ |
(ATATATA)n |
Simple_repeat |
| scaffold5426 |
44989 |
45072 |
- |
RS883 |
Unspecified |
| scaffold5426 |
46007 |
46041 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold5426 |
46946 |
46973 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5426 |
47458 |
47530 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold5426 |
49347 |
49892 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5426 |
50342 |
50417 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold5426 |
50815 |
51032 |
+ |
Athila6B_I-int |
LTR/Gypsy |
| scaffold5426 |
51135 |
51206 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold5426 |
51722 |
51758 |
+ |
(A)n |
Simple_repeat |
| scaffold5426 |
53086 |
53161 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5426 |
53483 |
53517 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold5426 |
53598 |
53656 |
+ |
(TTATGT)n |
Simple_repeat |
| scaffold5426 |
54464 |
54747 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold5426 |
56493 |
56543 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5426 |
58276 |
58494 |
- |
RS6797 |
Unspecified |
| scaffold5426 |
58880 |
58959 |
+ |
A-rich |
Low_complexity |
| scaffold5426 |
58961 |
59104 |
- |
RS158 |
Unspecified |
| scaffold5426 |
60203 |
60228 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold5426 |
60866 |
61039 |
- |
EnSpm-N1_OS |
DNA/CMC-EnSpm |
| scaffold5426 |
61421 |
61609 |
- |
RS10100 |
Unspecified |
| scaffold5426 |
63012 |
63038 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold5426 |
63390 |
64022 |
- |
RIRE1_LTR |
LTR/Copia |
| scaffold5426 |
66418 |
66573 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold5426 |
67625 |
67669 |
+ |
RS423 |
Unspecified |
| scaffold5426 |
67666 |
68154 |
+ |
PL82 |
Unspecified |
| scaffold5426 |
68145 |
68208 |
+ |
RS423 |
Unspecified |
| scaffold5426 |
68674 |
68765 |
+ |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold5426 |
68783 |
68813 |
+ |
(CTTTC)n |
Simple_repeat |
| scaffold5426 |
71095 |
71493 |
+ |
Atlantys3_I-int |
LTR/Gypsy |
| scaffold5426 |
71709 |
73270 |
+ |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold5426 |
73275 |
73679 |
- |
PL176 |
Unspecified |
| scaffold5426 |
73319 |
74806 |
- |
RS1879 |
Unspecified |
| scaffold5426 |
74004 |
74925 |
- |
PL129 |
Unspecified |
| scaffold5426 |
77851 |
77952 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold5426 |
78698 |
78806 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold5426 |
79305 |
79431 |
- |
RS911 |
Unspecified |
| scaffold5426 |
79442 |
79572 |
- |
RS911 |
Unspecified |
| scaffold5426 |
79489 |
79866 |
- |
RS911 |
Unspecified |
| scaffold5426 |
79535 |
80834 |
- |
RS149 |
Unspecified |
| scaffold5426 |
80837 |
81530 |
- |
RS1627 |
Unspecified |
| scaffold5426 |
81742 |
81793 |
+ |
(GCCG)n |
Simple_repeat |