scaffold5429 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5429 |
5133 |
5247 |
- |
PL420 |
Unspecified |
| scaffold5429 |
8572 |
8735 |
+ |
RS5401 |
Unspecified |
| scaffold5429 |
8950 |
8983 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5429 |
9364 |
9523 |
+ |
RS1055 |
Unspecified |
| scaffold5429 |
10276 |
10704 |
- |
PL464 |
Unspecified |
| scaffold5429 |
10770 |
10957 |
+ |
RS14768 |
Unspecified |
| scaffold5429 |
10968 |
11135 |
- |
RS14768 |
Unspecified |
| scaffold5429 |
12248 |
12510 |
+ |
RS356 |
Unspecified |
| scaffold5429 |
12547 |
12596 |
- |
PL329 |
Unspecified |
| scaffold5429 |
12592 |
12700 |
- |
RS17243 |
Unspecified |
| scaffold5429 |
13004 |
13175 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5429 |
13247 |
13316 |
- |
RS463 |
Unspecified |
| scaffold5429 |
13339 |
13417 |
- |
RS84 |
Unspecified |
| scaffold5429 |
13415 |
13587 |
- |
RS233 |
Unspecified |
| scaffold5429 |
13591 |
13732 |
- |
RS4 |
Unspecified |
| scaffold5429 |
13789 |
13821 |
+ |
(ACGGAC)n |
Simple_repeat |
| scaffold5429 |
14720 |
14841 |
- |
RS16382 |
Unspecified |
| scaffold5429 |
14752 |
14861 |
- |
PL436 |
Unspecified |
| scaffold5429 |
15213 |
15488 |
- |
RS1 |
Unspecified |
| scaffold5429 |
15394 |
15506 |
+ |
RS16358 |
Unspecified |
| scaffold5429 |
16192 |
16422 |
+ |
RS7944 |
Unspecified |
| scaffold5429 |
16732 |
16803 |
- |
RS9775 |
Unspecified |
| scaffold5429 |
17243 |
17279 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
18072 |
18091 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
18690 |
18734 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
19176 |
19760 |
- |
RS3121 |
Unspecified |
| scaffold5429 |
19353 |
20246 |
+ |
RS2174 |
Unspecified |
| scaffold5429 |
20435 |
20468 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
20718 |
21004 |
- |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold5429 |
21058 |
22634 |
- |
Copia10-VV_I-int |
LTR/Copia |
| scaffold5429 |
23125 |
24513 |
- |
Copia10-VV_I-int |
LTR/Copia |
| scaffold5429 |
24594 |
25092 |
+ |
RS4002 |
Unspecified |
| scaffold5429 |
27454 |
27867 |
+ |
RS2174 |
Unspecified |
| scaffold5429 |
28219 |
28302 |
- |
RS18111 |
Unspecified |
| scaffold5429 |
28233 |
28309 |
+ |
RS727 |
Unspecified |
| scaffold5429 |
30656 |
30711 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold5429 |
30852 |
30883 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
31038 |
31379 |
+ |
RS4408 |
Unspecified |
| scaffold5429 |
33486 |
33557 |
+ |
PL701 |
Unspecified |
| scaffold5429 |
33537 |
33677 |
- |
PL105 |
Unspecified |
| scaffold5429 |
33673 |
33713 |
- |
PL105 |
Unspecified |
| scaffold5429 |
35108 |
35703 |
- |
RS1250 |
Unspecified |
| scaffold5429 |
35644 |
35769 |
+ |
RS1873 |
Unspecified |
| scaffold5429 |
36155 |
36197 |
+ |
(TTTACCC)n |
Simple_repeat |
| scaffold5429 |
36197 |
36265 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
36346 |
36379 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5429 |
37534 |
37569 |
+ |
(TTCAACT)n |
Simple_repeat |
| scaffold5429 |
37773 |
37973 |
- |
RS2440 |
Unspecified |
| scaffold5429 |
37964 |
38061 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5429 |
39455 |
39514 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5429 |
39551 |
39728 |
+ |
GA-rich |
Low_complexity |
| scaffold5429 |
39672 |
39728 |
+ |
GA-rich |
Low_complexity |
| scaffold5429 |
39800 |
40032 |
- |
RS3554 |
Unspecified |
| scaffold5429 |
39849 |
40102 |
- |
RS7289 |
Unspecified |
| scaffold5429 |
40169 |
40550 |
- |
RS11698 |
Unspecified |
| scaffold5429 |
40564 |
40741 |
- |
RS9892 |
Unspecified |
| scaffold5429 |
40931 |
40960 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold5429 |
43207 |
43270 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
44087 |
44365 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold5429 |
44318 |
44365 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold5429 |
44832 |
44889 |
+ |
(TTAATTA)n |
Simple_repeat |
| scaffold5429 |
45862 |
45979 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold5429 |
46278 |
46782 |
+ |
PL587 |
Unspecified |
| scaffold5429 |
46799 |
46993 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold5429 |
47120 |
47154 |
+ |
(AATG)n |
Simple_repeat |
| scaffold5429 |
47496 |
47765 |
+ |
RS6646 |
Unspecified |
| scaffold5429 |
47948 |
47980 |
+ |
(CCCCTC)n |
Simple_repeat |
| scaffold5429 |
48164 |
48297 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
48647 |
48680 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5429 |
49281 |
49403 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5429 |
49883 |
49903 |
+ |
(A)n |
Simple_repeat |
| scaffold5429 |
50396 |
50592 |
- |
RS648 |
Unspecified |
| scaffold5429 |
50574 |
50800 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold5429 |
51064 |
51192 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold5429 |
51095 |
51204 |
- |
ZhAT8_ZM |
DNA/hAT-Ac |
| scaffold5429 |
54636 |
55167 |
- |
RS9976 |
Unspecified |
| scaffold5429 |
55655 |
55677 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5429 |
56029 |
56062 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5429 |
56095 |
56263 |
- |
RS648 |
Unspecified |
| scaffold5429 |
56467 |
56477 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold5429 |
56478 |
56504 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold5429 |
56777 |
56820 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
57009 |
57047 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold5429 |
57403 |
57425 |
+ |
(A)n |
Simple_repeat |
| scaffold5429 |
61668 |
61707 |
+ |
(AATTTTG)n |
Simple_repeat |
| scaffold5429 |
62269 |
62289 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
62567 |
62626 |
+ |
(AATT)n |
Simple_repeat |
| scaffold5429 |
62660 |
62740 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold5429 |
62754 |
62849 |
+ |
(GTG)n |
Simple_repeat |
| scaffold5429 |
62933 |
63013 |
+ |
(GGTGGC)n |
Simple_repeat |
| scaffold5429 |
63018 |
63057 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
63073 |
63287 |
+ |
G-rich |
Low_complexity |
| scaffold5429 |
63293 |
63340 |
+ |
GA-rich |
Low_complexity |
| scaffold5429 |
63350 |
63770 |
+ |
RS7712 |
Unspecified |
| scaffold5429 |
65005 |
65079 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5429 |
65085 |
65218 |
+ |
(TATTCG)n |
Simple_repeat |
| scaffold5429 |
65391 |
65426 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold5429 |
65955 |
65980 |
+ |
(TCATTT)n |
Simple_repeat |
| scaffold5429 |
66314 |
66500 |
+ |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold5429 |
66576 |
66617 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5429 |
67009 |
67052 |
+ |
(TATTG)n |
Simple_repeat |
| scaffold5429 |
69609 |
71747 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5429 |
71746 |
72672 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5429 |
72679 |
73062 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5429 |
74662 |
74848 |
+ |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold5429 |
75274 |
75313 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold5429 |
75537 |
75967 |
- |
PL494 |
Unspecified |
| scaffold5429 |
75738 |
76158 |
+ |
RS6195 |
Unspecified |
| scaffold5429 |
76547 |
76592 |
+ |
A-rich |
Low_complexity |
| scaffold5429 |
77230 |
77630 |
- |
RS488 |
Unspecified |
| scaffold5429 |
78021 |
78126 |
- |
RS121 |
Unspecified |
| scaffold5429 |
78021 |
78162 |
- |
RS247 |
Unspecified |
| scaffold5429 |
78189 |
78212 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
78438 |
78500 |
+ |
(A)n |
Simple_repeat |
| scaffold5429 |
78865 |
78891 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
79903 |
80008 |
- |
RS2803 |
Unspecified |
| scaffold5429 |
80107 |
80168 |
+ |
(CCTCCA)n |
Simple_repeat |
| scaffold5429 |
80310 |
80375 |
+ |
(CAACAT)n |
Simple_repeat |
| scaffold5429 |
80517 |
81439 |
+ |
PL129 |
Unspecified |
| scaffold5429 |
81813 |
81858 |
+ |
(GGTTTTTC)n |
Simple_repeat |
| scaffold5429 |
81872 |
81901 |
+ |
(ATTGT)n |
Simple_repeat |
| scaffold5429 |
81967 |
82010 |
+ |
G-rich |
Low_complexity |
| scaffold5429 |
82248 |
82461 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
82445 |
82461 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
82510 |
82551 |
+ |
(GGTGAA)n |
Simple_repeat |
| scaffold5429 |
82559 |
82747 |
+ |
RS2803 |
Unspecified |
| scaffold5429 |
82769 |
82799 |
+ |
(T)n |
Simple_repeat |
| scaffold5429 |
83413 |
83597 |
+ |
RS184 |
Unspecified |