scaffold5449 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold5449 |
365 |
447 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
scaffold5449 |
626 |
816 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
scaffold5449 |
3402 |
3445 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
3919 |
3954 |
+ |
(A)n |
Simple_repeat |
scaffold5449 |
3957 |
4046 |
+ |
RS973 |
Unspecified |
scaffold5449 |
4105 |
4149 |
+ |
(AAT)n |
Simple_repeat |
scaffold5449 |
4294 |
4560 |
+ |
RS106 |
Unspecified |
scaffold5449 |
4594 |
4634 |
+ |
(TTTAATT)n |
Simple_repeat |
scaffold5449 |
4911 |
4987 |
- |
PL753 |
Unspecified |
scaffold5449 |
5961 |
7080 |
+ |
RS526 |
Unspecified |
scaffold5449 |
7291 |
7368 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
7501 |
7542 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
7543 |
7572 |
+ |
(ATAAA)n |
Simple_repeat |
scaffold5449 |
10339 |
10568 |
+ |
RS18 |
Unspecified |
scaffold5449 |
10629 |
10648 |
+ |
(TA)n |
Simple_repeat |
scaffold5449 |
12816 |
12839 |
+ |
(A)n |
Simple_repeat |
scaffold5449 |
14492 |
14518 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
15797 |
15842 |
+ |
(AAAAAAT)n |
Simple_repeat |
scaffold5449 |
16689 |
16788 |
+ |
RS17642 |
Unspecified |
scaffold5449 |
16882 |
16905 |
+ |
(A)n |
Simple_repeat |
scaffold5449 |
17438 |
17470 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
17471 |
17476 |
+ |
(TAAAA)n |
Simple_repeat |
scaffold5449 |
18656 |
18680 |
+ |
(A)n |
Simple_repeat |
scaffold5449 |
19681 |
19880 |
+ |
RS152 |
Unspecified |
scaffold5449 |
19882 |
20062 |
- |
RS503 |
Unspecified |
scaffold5449 |
20126 |
20316 |
+ |
RS18243 |
Unspecified |
scaffold5449 |
20321 |
20384 |
- |
RS8911 |
Unspecified |
scaffold5449 |
20354 |
20424 |
- |
RS16196 |
Unspecified |
scaffold5449 |
20455 |
20552 |
+ |
(CTCTTT)n |
Simple_repeat |
scaffold5449 |
20883 |
20961 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
20930 |
20994 |
+ |
(ATGATA)n |
Simple_repeat |
scaffold5449 |
20951 |
21038 |
+ |
PL111 |
Unspecified |
scaffold5449 |
21091 |
21548 |
- |
RS1922 |
Unspecified |
scaffold5449 |
21884 |
21922 |
+ |
RS10239 |
Unspecified |
scaffold5449 |
23431 |
23999 |
+ |
RS2142 |
Unspecified |
scaffold5449 |
24160 |
24274 |
+ |
RS5182 |
Unspecified |
scaffold5449 |
24269 |
24396 |
+ |
RS8892 |
Unspecified |
scaffold5449 |
24571 |
24602 |
+ |
(T)n |
Simple_repeat |
scaffold5449 |
26517 |
27888 |
- |
L1-1_GM |
LINE/L1 |
scaffold5449 |
30454 |
30489 |
+ |
(T)n |
Simple_repeat |
scaffold5449 |
30525 |
30596 |
+ |
RS7826 |
Unspecified |
scaffold5449 |
30944 |
31006 |
+ |
RS3298 |
Unspecified |
scaffold5449 |
31178 |
31296 |
+ |
RS6553 |
Unspecified |
scaffold5449 |
31430 |
31499 |
+ |
(ACCGGA)n |
Simple_repeat |
scaffold5449 |
31430 |
31661 |
+ |
(ACCGGA)n |
Simple_repeat |
scaffold5449 |
31486 |
31661 |
- |
RS9294 |
Unspecified |
scaffold5449 |
31857 |
31960 |
+ |
RS7306 |
Unspecified |
scaffold5449 |
33867 |
34044 |
- |
MUMT |
DNA/MULE-MuDR |
scaffold5449 |
34055 |
34185 |
- |
RS7540 |
Unspecified |
scaffold5449 |
35540 |
36303 |
- |
Mariner-1_GM |
DNA/TcMar-Stowaway |
scaffold5449 |
37564 |
37710 |
- |
RS14502 |
Unspecified |
scaffold5449 |
37853 |
38117 |
- |
RS12440 |
Unspecified |
scaffold5449 |
39191 |
39368 |
+ |
RS3127 |
Unspecified |
scaffold5449 |
39918 |
40030 |
+ |
RS10644 |
Unspecified |
scaffold5449 |
40240 |
40403 |
- |
RS10668 |
Unspecified |
scaffold5449 |
40658 |
40792 |
- |
RS8689 |
Unspecified |
scaffold5449 |
41270 |
41433 |
- |
RS6069 |
Unspecified |
scaffold5449 |
41548 |
41663 |
+ |
(GTT)n |
Simple_repeat |
scaffold5449 |
41548 |
41847 |
+ |
(GTT)n |
Simple_repeat |
scaffold5449 |
41649 |
41847 |
- |
RS6378 |
Unspecified |
scaffold5449 |
42336 |
42467 |
- |
ATENSPM1A |
DNA/CMC-EnSpm |
scaffold5449 |
42470 |
42621 |
- |
RS10668 |
Unspecified |
scaffold5449 |
42988 |
43113 |
+ |
RS8498 |
Unspecified |
scaffold5449 |
42990 |
43136 |
- |
RS8179 |
Unspecified |
scaffold5449 |
44354 |
44713 |
+ |
RS4338 |
Unspecified |
scaffold5449 |
44544 |
44822 |
+ |
RS6678 |
Unspecified |
scaffold5449 |
46543 |
46559 |
+ |
(A)n |
Simple_repeat |
scaffold5449 |
47121 |
47173 |
+ |
(TC)n |
Simple_repeat |
scaffold5449 |
47180 |
47220 |
+ |
(TACATTTA)n |
Simple_repeat |
scaffold5449 |
48205 |
48887 |
- |
MUMT |
DNA/MULE-MuDR |
scaffold5449 |
49123 |
49163 |
+ |
A-rich |
Low_complexity |
scaffold5449 |
49582 |
49953 |
+ |
RS12117 |
Unspecified |
scaffold5449 |
49955 |
50125 |
+ |
RS2553 |
Unspecified |
scaffold5449 |
50002 |
50160 |
+ |
RS5964 |
Unspecified |
scaffold5449 |
50177 |
50258 |
- |
RS4011 |
Unspecified |
scaffold5449 |
51142 |
51313 |
+ |
RS12175 |
Unspecified |
scaffold5449 |
52081 |
52252 |
+ |
RS12175 |
Unspecified |
scaffold5449 |
52276 |
52365 |
- |
RS11823 |
Unspecified |
scaffold5449 |
52836 |
53019 |
+ |
PL822 |
Unspecified |
scaffold5449 |
53019 |
53127 |
+ |
RS8892 |
Unspecified |
scaffold5449 |
53303 |
53330 |
+ |
(TTA)n |
Simple_repeat |
scaffold5449 |
54205 |
54265 |
+ |
PIGY-I_PS |
LTR/Gypsy |
scaffold5449 |
54583 |
54630 |
- |
RS18243 |
Unspecified |
scaffold5449 |
55036 |
55346 |
+ |
RS838 |
Unspecified |
scaffold5449 |
55071 |
55346 |
+ |
RS256 |
Unspecified |
scaffold5449 |
55963 |
56128 |
+ |
PL307 |
Unspecified |
scaffold5449 |
56509 |
56921 |
- |
RS2442 |
Unspecified |
scaffold5449 |
56651 |
56965 |
+ |
RS3600 |
Unspecified |
scaffold5449 |
60698 |
60800 |
+ |
RS2477 |
Unspecified |
scaffold5449 |
60802 |
61158 |
- |
RS4448 |
Unspecified |
scaffold5449 |
62141 |
62175 |
+ |
GA-rich |
Low_complexity |
scaffold5449 |
62207 |
62231 |
+ |
(TA)n |
Simple_repeat |
scaffold5449 |
62539 |
62809 |
- |
PL759 |
Unspecified |
scaffold5449 |
63139 |
63232 |
+ |
RS250 |
Unspecified |
scaffold5449 |
67378 |
67411 |
+ |
(TTCATC)n |
Simple_repeat |
scaffold5449 |
68300 |
68419 |
- |
MuDR-7_VV |
DNA/MULE-MuDR |
scaffold5449 |
68966 |
69191 |
- |
RS376 |
Unspecified |
scaffold5449 |
69107 |
69209 |
+ |
RS3380 |
Unspecified |
scaffold5449 |
69973 |
70028 |
+ |
Vandal5A |
DNA/MULE-MuDR |
scaffold5449 |
71185 |
71276 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold5449 |
74483 |
74679 |
+ |
RS522 |
Unspecified |
scaffold5449 |
78299 |
78407 |
+ |
RS16816 |
Unspecified |
scaffold5449 |
78675 |
79074 |
- |
RS224 |
Unspecified |
scaffold5449 |
79004 |
79188 |
- |
RS715 |
Unspecified |
scaffold5449 |
79217 |
79277 |
+ |
(GTTT)n |
Simple_repeat |
scaffold5449 |
79336 |
79551 |
- |
V1_LTR |
LTR/Gypsy |
scaffold5449 |
79634 |
79742 |
+ |
RS16816 |
Unspecified |
scaffold5449 |
80611 |
80719 |
+ |
RS6506 |
Unspecified |