scaffold5678 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5678 |
113 |
153 |
+ |
RTE-1_PD |
LINE/RTE-BovB |
| scaffold5678 |
647 |
746 |
+ |
RS16900 |
Unspecified |
| scaffold5678 |
2050 |
2080 |
+ |
(CAT)n |
Simple_repeat |
| scaffold5678 |
3050 |
3089 |
+ |
(AATGTGA)n |
Simple_repeat |
| scaffold5678 |
4449 |
4601 |
+ |
PL206 |
Unspecified |
| scaffold5678 |
4465 |
4558 |
+ |
RS2734 |
Unspecified |
| scaffold5678 |
4667 |
4897 |
- |
RS15131 |
Unspecified |
| scaffold5678 |
4882 |
4982 |
+ |
PL715 |
Unspecified |
| scaffold5678 |
4894 |
4981 |
- |
RS2734 |
Unspecified |
| scaffold5678 |
4931 |
4988 |
- |
RS17009 |
Unspecified |
| scaffold5678 |
6357 |
6454 |
- |
RS6556 |
Unspecified |
| scaffold5678 |
7369 |
7404 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
9960 |
9992 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
12073 |
12089 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
14440 |
14886 |
- |
RS2021 |
Unspecified |
| scaffold5678 |
15466 |
15913 |
- |
RS1129 |
Unspecified |
| scaffold5678 |
16053 |
16251 |
+ |
RS2452 |
Unspecified |
| scaffold5678 |
17478 |
17522 |
+ |
(TATTTC)n |
Simple_repeat |
| scaffold5678 |
18444 |
18621 |
- |
PL352 |
Unspecified |
| scaffold5678 |
18617 |
18987 |
+ |
RS48 |
Unspecified |
| scaffold5678 |
19497 |
20041 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold5678 |
19619 |
19687 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5678 |
21340 |
21836 |
+ |
RS314 |
Unspecified |
| scaffold5678 |
21401 |
21836 |
+ |
RS2055 |
Unspecified |
| scaffold5678 |
21837 |
22411 |
+ |
RS37 |
Unspecified |
| scaffold5678 |
24632 |
24696 |
+ |
Gypsy-52_BD-I |
LTR/Gypsy |
| scaffold5678 |
27214 |
27391 |
- |
RS7064 |
Unspecified |
| scaffold5678 |
27249 |
27471 |
+ |
PL827 |
Unspecified |
| scaffold5678 |
27396 |
27553 |
+ |
PL827 |
Unspecified |
| scaffold5678 |
27476 |
27635 |
+ |
PL827 |
Unspecified |
| scaffold5678 |
27579 |
27764 |
+ |
RS48 |
Unspecified |
| scaffold5678 |
27721 |
28164 |
+ |
RS48 |
Unspecified |
| scaffold5678 |
27779 |
28971 |
+ |
RS48 |
Unspecified |
| scaffold5678 |
28971 |
29259 |
+ |
PL178 |
Unspecified |
| scaffold5678 |
29322 |
29524 |
+ |
RS549 |
Unspecified |
| scaffold5678 |
29408 |
29538 |
+ |
RS18405 |
Unspecified |
| scaffold5678 |
29620 |
29645 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5678 |
31041 |
31076 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
31119 |
31197 |
+ |
(ACC)n |
Simple_repeat |
| scaffold5678 |
31119 |
31517 |
+ |
(ACC)n |
Simple_repeat |
| scaffold5678 |
31162 |
31517 |
- |
RS794 |
Unspecified |
| scaffold5678 |
31603 |
31735 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold5678 |
32205 |
32260 |
+ |
(TTGATT)n |
Simple_repeat |
| scaffold5678 |
32304 |
32342 |
+ |
(TTTTGGA)n |
Simple_repeat |
| scaffold5678 |
32724 |
32847 |
+ |
GA-rich |
Low_complexity |
| scaffold5678 |
33504 |
33548 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
35244 |
35323 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
37609 |
37731 |
+ |
RS17752 |
Unspecified |
| scaffold5678 |
37790 |
37905 |
+ |
RS17071 |
Unspecified |
| scaffold5678 |
38161 |
38210 |
+ |
RS1323 |
Unspecified |
| scaffold5678 |
38451 |
38509 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
40605 |
40694 |
+ |
G-rich |
Low_complexity |
| scaffold5678 |
41106 |
41124 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
41673 |
41836 |
- |
RS3868 |
Unspecified |
| scaffold5678 |
42954 |
42988 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5678 |
43072 |
43094 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
43892 |
44168 |
- |
RS17600 |
Unspecified |
| scaffold5678 |
44641 |
44655 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
44656 |
44692 |
+ |
(AATAG)n |
Simple_repeat |
| scaffold5678 |
44707 |
44735 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5678 |
44768 |
44968 |
+ |
RS4788 |
Unspecified |
| scaffold5678 |
45180 |
45248 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
45893 |
45927 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
45928 |
45957 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold5678 |
46031 |
46080 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5678 |
46109 |
46160 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5678 |
46829 |
46856 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
47289 |
47720 |
+ |
PL301 |
Unspecified |
| scaffold5678 |
47860 |
47898 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
49999 |
50318 |
+ |
RS932 |
Unspecified |
| scaffold5678 |
50587 |
50786 |
- |
RS1485 |
Unspecified |
| scaffold5678 |
50997 |
51048 |
+ |
(ATTTTAA)n |
Simple_repeat |
| scaffold5678 |
51353 |
51424 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5678 |
52383 |
52601 |
- |
RS109 |
Unspecified |
| scaffold5678 |
52819 |
52877 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
52950 |
52980 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
52990 |
53230 |
- |
RS356 |
Unspecified |
| scaffold5678 |
53263 |
53313 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold5678 |
53765 |
56501 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5678 |
56517 |
56567 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold5678 |
57527 |
57771 |
- |
RS4 |
Unspecified |
| scaffold5678 |
57905 |
57923 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
58320 |
58350 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
60339 |
60378 |
+ |
(AAAAAT)n |
Simple_repeat |
| scaffold5678 |
61012 |
61104 |
+ |
(AGAAAACTTC)n |
Simple_repeat |
| scaffold5678 |
61126 |
61184 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5678 |
61606 |
61642 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold5678 |
61644 |
61756 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5678 |
61776 |
61894 |
+ |
(AACTTCAGAT)n |
Simple_repeat |
| scaffold5678 |
62366 |
62382 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
62569 |
62667 |
+ |
(CCAGC)n |
Simple_repeat |
| scaffold5678 |
62723 |
62825 |
+ |
(CCAGC)n |
Simple_repeat |
| scaffold5678 |
62864 |
62889 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
63377 |
63395 |
+ |
(A)n |
Simple_repeat |
| scaffold5678 |
63427 |
63489 |
+ |
(GGCCC)n |
Simple_repeat |
| scaffold5678 |
64320 |
64337 |
+ |
(T)n |
Simple_repeat |
| scaffold5678 |
65167 |
65360 |
- |
PL622 |
Unspecified |
| scaffold5678 |
66574 |
66724 |
+ |
RS6485 |
Unspecified |
| scaffold5678 |
67810 |
67872 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5678 |
67908 |
68177 |
- |
RS1 |
Unspecified |
| scaffold5678 |
68560 |
68599 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold5678 |
68827 |
68875 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
69051 |
69139 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5678 |
69201 |
69235 |
+ |
(ATAATC)n |
Simple_repeat |
| scaffold5678 |
69293 |
69342 |
+ |
A-rich |
Low_complexity |
| scaffold5678 |
69346 |
69700 |
+ |
RS482 |
Unspecified |
| scaffold5678 |
69821 |
70813 |
+ |
RS49 |
Unspecified |