scaffold5705 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5705 |
987 |
1019 |
+ |
(AGT)n |
Simple_repeat |
| scaffold5705 |
1669 |
1946 |
+ |
RS427 |
Unspecified |
| scaffold5705 |
2163 |
2901 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5705 |
2904 |
3431 |
- |
RS89 |
Unspecified |
| scaffold5705 |
3739 |
3959 |
+ |
RS10269 |
Unspecified |
| scaffold5705 |
3740 |
4016 |
- |
RS13405 |
Unspecified |
| scaffold5705 |
3946 |
4333 |
+ |
RS520 |
Unspecified |
| scaffold5705 |
4741 |
4784 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold5705 |
5515 |
5622 |
- |
PL754 |
Unspecified |
| scaffold5705 |
5523 |
5616 |
- |
RS16382 |
Unspecified |
| scaffold5705 |
6342 |
6367 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
7085 |
7134 |
+ |
(ATTATTCT)n |
Simple_repeat |
| scaffold5705 |
9612 |
9648 |
+ |
Copia-110_BRa-I |
LTR/Copia |
| scaffold5705 |
11738 |
11782 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold5705 |
15133 |
15150 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
16118 |
16176 |
- |
RS17 |
Unspecified |
| scaffold5705 |
16567 |
16675 |
- |
RS285 |
Unspecified |
| scaffold5705 |
16824 |
16864 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
16879 |
16960 |
+ |
GA-rich |
Low_complexity |
| scaffold5705 |
17016 |
17071 |
+ |
(TTCTTT)n |
Simple_repeat |
| scaffold5705 |
17178 |
17324 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5705 |
17583 |
17700 |
- |
PL132 |
Unspecified |
| scaffold5705 |
19721 |
20138 |
+ |
PL352 |
Unspecified |
| scaffold5705 |
20456 |
20481 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
20774 |
20805 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5705 |
21581 |
21623 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
21835 |
21854 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
22033 |
22067 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
22270 |
22309 |
+ |
(TCTTTTC)n |
Simple_repeat |
| scaffold5705 |
22310 |
22330 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5705 |
22957 |
23870 |
- |
RS2212 |
Unspecified |
| scaffold5705 |
24492 |
24515 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
24633 |
24659 |
+ |
(CGGGC)n |
Simple_repeat |
| scaffold5705 |
24971 |
25143 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5705 |
25270 |
25836 |
+ |
PL744 |
Unspecified |
| scaffold5705 |
25919 |
26193 |
+ |
RS1 |
Unspecified |
| scaffold5705 |
26252 |
26422 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
26372 |
26422 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
26421 |
26575 |
+ |
RS5208 |
Unspecified |
| scaffold5705 |
26677 |
26982 |
+ |
RS546 |
Unspecified |
| scaffold5705 |
26978 |
27116 |
+ |
Helitron1_ZM |
RC/Helitron |
| scaffold5705 |
27437 |
27573 |
+ |
RS458 |
Unspecified |
| scaffold5705 |
28326 |
28351 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
28647 |
28855 |
- |
RS440 |
Unspecified |
| scaffold5705 |
30504 |
30537 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
30761 |
30794 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
31195 |
31216 |
+ |
(AGC)n |
Simple_repeat |
| scaffold5705 |
31472 |
31629 |
+ |
RS740 |
Unspecified |
| scaffold5705 |
31871 |
31937 |
+ |
Ogre-PT3_I-int |
LTR/Gypsy |
| scaffold5705 |
34402 |
34441 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
39332 |
39354 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
40882 |
40912 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold5705 |
41121 |
41169 |
+ |
(CCCTT)n |
Simple_repeat |
| scaffold5705 |
41235 |
41388 |
- |
RS54 |
Unspecified |
| scaffold5705 |
41474 |
41516 |
- |
Copia-41_BD-I |
LTR/Copia |
| scaffold5705 |
41727 |
41763 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
44316 |
44421 |
+ |
RS285 |
Unspecified |
| scaffold5705 |
44653 |
44674 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
44861 |
44888 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold5705 |
45087 |
45144 |
+ |
(ACCGG)n |
Simple_repeat |
| scaffold5705 |
45248 |
45278 |
+ |
(GACCCG)n |
Simple_repeat |
| scaffold5705 |
45822 |
45896 |
- |
RS5996 |
Unspecified |
| scaffold5705 |
45931 |
46005 |
+ |
(TTTGAACCGT)n |
Simple_repeat |
| scaffold5705 |
46285 |
46351 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
47144 |
47902 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5705 |
47315 |
47902 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5705 |
47828 |
47902 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5705 |
48037 |
48112 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold5705 |
48451 |
48508 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold5705 |
49268 |
49321 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold5705 |
49685 |
49716 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
49920 |
49976 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5705 |
50401 |
50419 |
+ |
(C)n |
Simple_repeat |
| scaffold5705 |
50569 |
50723 |
+ |
RS15891 |
Unspecified |
| scaffold5705 |
50730 |
50940 |
- |
PL565 |
Unspecified |
| scaffold5705 |
51656 |
51681 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
52773 |
53503 |
+ |
Mariner-1_SBi |
DNA/TcMar-Stowaway |
| scaffold5705 |
54793 |
54884 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5705 |
55534 |
55565 |
+ |
GA-rich |
Low_complexity |
| scaffold5705 |
55919 |
56006 |
+ |
RS3513 |
Unspecified |
| scaffold5705 |
55990 |
56507 |
- |
RS204 |
Unspecified |
| scaffold5705 |
56306 |
56545 |
+ |
PL619 |
Unspecified |
| scaffold5705 |
56534 |
56640 |
+ |
PL9 |
Unspecified |
| scaffold5705 |
56863 |
56895 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold5705 |
57469 |
57703 |
- |
RS15131 |
Unspecified |
| scaffold5705 |
57892 |
57916 |
+ |
(T)n |
Simple_repeat |
| scaffold5705 |
59825 |
59843 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
60068 |
60088 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
62492 |
62516 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
64758 |
64788 |
+ |
A-rich |
Low_complexity |
| scaffold5705 |
65099 |
65147 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold5705 |
65167 |
65190 |
+ |
(A)n |
Simple_repeat |
| scaffold5705 |
65294 |
65325 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5705 |
65382 |
65417 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5705 |
65558 |
65607 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold5705 |
65655 |
65683 |
+ |
(GATGT)n |
Simple_repeat |
| scaffold5705 |
65891 |
66012 |
+ |
RS11718 |
Unspecified |
| scaffold5705 |
66241 |
66345 |
+ |
RS1600 |
Unspecified |
| scaffold5705 |
66345 |
66904 |
+ |
RS1275 |
Unspecified |
| scaffold5705 |
66746 |
66949 |
- |
RS8043 |
Unspecified |
| scaffold5705 |
67209 |
67255 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5705 |
67685 |
68593 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5705 |
67687 |
68576 |
- |
Copia-92_ST-I |
LTR/Copia |
| scaffold5705 |
69068 |
69114 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold5705 |
69553 |
70166 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold5705 |
70371 |
72140 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold5705 |
72223 |
73776 |
+ |
Copia-102_GM-I |
LTR/Copia |
| scaffold5705 |
74686 |
74866 |
- |
PL203 |
Unspecified |
| scaffold5705 |
74865 |
75061 |
- |
PL469 |
Unspecified |
| scaffold5705 |
75058 |
75205 |
- |
PL340 |
Unspecified |
| scaffold5705 |
76658 |
76696 |
+ |
(TA)n |
Simple_repeat |
| scaffold5705 |
76715 |
76824 |
- |
PL80 |
Unspecified |
| scaffold5705 |
77151 |
77515 |
- |
RS2253 |
Unspecified |
| scaffold5705 |
77866 |
77894 |
+ |
(AG)n |
Simple_repeat |