scaffold5712 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5712 |
405 |
457 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5712 |
3554 |
4603 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold5712 |
9231 |
9283 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5712 |
11198 |
11271 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5712 |
11317 |
11581 |
+ |
CAULIV-1_Mad |
LTR/Caulimovirus |
| scaffold5712 |
11598 |
11841 |
- |
RS581 |
Unspecified |
| scaffold5712 |
11989 |
12367 |
+ |
CAULIV1 |
LTR/Caulimovirus |
| scaffold5712 |
12892 |
12934 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5712 |
12942 |
13034 |
+ |
RS8 |
Unspecified |
| scaffold5712 |
15372 |
15404 |
+ |
(TGAAG)n |
Simple_repeat |
| scaffold5712 |
15891 |
15952 |
+ |
(AATG)n |
Simple_repeat |
| scaffold5712 |
16639 |
16695 |
+ |
(TATG)n |
Simple_repeat |
| scaffold5712 |
17234 |
17260 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold5712 |
17464 |
17487 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
17488 |
17493 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5712 |
17749 |
17913 |
+ |
RS17860 |
Unspecified |
| scaffold5712 |
19288 |
19530 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold5712 |
19778 |
19804 |
+ |
A-rich |
Low_complexity |
| scaffold5712 |
19869 |
19916 |
+ |
A-rich |
Low_complexity |
| scaffold5712 |
19969 |
20045 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5712 |
20250 |
20298 |
+ |
(ACATTA)n |
Simple_repeat |
| scaffold5712 |
20520 |
20559 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold5712 |
20805 |
20870 |
- |
RS240 |
Unspecified |
| scaffold5712 |
20869 |
21861 |
- |
PL465 |
Unspecified |
| scaffold5712 |
22441 |
22473 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
23293 |
23400 |
+ |
(TAACCC)n |
Simple_repeat |
| scaffold5712 |
23401 |
23450 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5712 |
23451 |
23475 |
+ |
(TAACCC)n |
Simple_repeat |
| scaffold5712 |
23488 |
23601 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5712 |
25492 |
25606 |
+ |
RS63 |
Unspecified |
| scaffold5712 |
25729 |
25748 |
+ |
(A)n |
Simple_repeat |
| scaffold5712 |
26383 |
26445 |
+ |
(TGTACAT)n |
Simple_repeat |
| scaffold5712 |
26617 |
26742 |
+ |
HATORY |
DNA/hAT-Ac |
| scaffold5712 |
26926 |
27088 |
+ |
RS8046 |
Unspecified |
| scaffold5712 |
27002 |
27141 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
27101 |
27141 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
27597 |
27709 |
- |
Ogre-PT2_LTR |
LTR/Gypsy |
| scaffold5712 |
28990 |
29012 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold5712 |
29849 |
29904 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold5712 |
30563 |
31023 |
- |
PL352 |
Unspecified |
| scaffold5712 |
32812 |
32828 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
34541 |
34660 |
- |
RS5 |
Unspecified |
| scaffold5712 |
34733 |
34758 |
+ |
(T)n |
Simple_repeat |
| scaffold5712 |
35948 |
36045 |
- |
PL20 |
Unspecified |
| scaffold5712 |
36075 |
36243 |
- |
RS295 |
Unspecified |
| scaffold5712 |
36256 |
36291 |
+ |
A-rich |
Low_complexity |
| scaffold5712 |
36298 |
36487 |
+ |
RS4054 |
Unspecified |
| scaffold5712 |
36551 |
36589 |
+ |
(AATATTA)n |
Simple_repeat |
| scaffold5712 |
36728 |
36985 |
- |
hAT-20_Mad |
DNA/hAT-Ac |
| scaffold5712 |
37203 |
37836 |
- |
HAT-16_Mad |
DNA/hAT-Ac |
| scaffold5712 |
37838 |
37877 |
+ |
(CATCTT)n |
Simple_repeat |
| scaffold5712 |
38058 |
38103 |
- |
ATENSPM6 |
DNA/CMC-EnSpm |
| scaffold5712 |
38071 |
38394 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold5712 |
38766 |
39115 |
+ |
RS42 |
Unspecified |
| scaffold5712 |
39113 |
39274 |
+ |
RS11862 |
Unspecified |
| scaffold5712 |
39352 |
39953 |
- |
PSL |
DNA/CMC-EnSpm |
| scaffold5712 |
40038 |
41173 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold5712 |
41301 |
41717 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold5712 |
41301 |
41932 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold5712 |
41529 |
41642 |
- |
EnSpm-20_SBi |
DNA/CMC-EnSpm |
| scaffold5712 |
41640 |
41932 |
+ |
RS2686 |
Unspecified |
| scaffold5712 |
41930 |
42009 |
+ |
PL871 |
Unspecified |
| scaffold5712 |
42007 |
42689 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold5712 |
42526 |
42689 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold5712 |
43063 |
43168 |
+ |
EnSpm-3_STu |
DNA/CMC-EnSpm |
| scaffold5712 |
43176 |
43323 |
- |
hAT-7_PTr |
DNA/hAT-Ac |
| scaffold5712 |
44232 |
44270 |
+ |
A-rich |
Low_complexity |
| scaffold5712 |
44618 |
44656 |
+ |
A-rich |
Low_complexity |
| scaffold5712 |
45212 |
45668 |
+ |
RS1686 |
Unspecified |
| scaffold5712 |
46020 |
46084 |
+ |
(A)n |
Simple_repeat |
| scaffold5712 |
47363 |
47616 |
- |
hAT-6_STu |
DNA/hAT-Ac |
| scaffold5712 |
47688 |
47831 |
+ |
RS13528 |
Unspecified |
| scaffold5712 |
47837 |
47951 |
- |
RS14563 |
Unspecified |
| scaffold5712 |
48049 |
48291 |
+ |
(TG)n |
Simple_repeat |
| scaffold5712 |
48245 |
48291 |
+ |
(TG)n |
Simple_repeat |
| scaffold5712 |
48349 |
48393 |
+ |
(GGT)n |
Simple_repeat |
| scaffold5712 |
48410 |
48704 |
- |
RS287 |
Unspecified |
| scaffold5712 |
48754 |
48899 |
- |
RS9693 |
Unspecified |