scaffold5713 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5713 |
46 |
127 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold5713 |
435 |
629 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold5713 |
848 |
1511 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold5713 |
1838 |
4849 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold5713 |
5311 |
6202 |
- |
RS12813 |
Unspecified |
| scaffold5713 |
6833 |
6897 |
+ |
(GAGGAC)n |
Simple_repeat |
| scaffold5713 |
6898 |
6906 |
+ |
(GATGAC)n |
Simple_repeat |
| scaffold5713 |
7115 |
7585 |
- |
RS7383 |
Unspecified |
| scaffold5713 |
7644 |
7722 |
+ |
(A)n |
Simple_repeat |
| scaffold5713 |
8640 |
8693 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold5713 |
10769 |
10803 |
+ |
(GCTTT)n |
Simple_repeat |
| scaffold5713 |
11138 |
12188 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold5713 |
12638 |
12830 |
- |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold5713 |
12871 |
13124 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold5713 |
13150 |
13491 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold5713 |
13184 |
13490 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5713 |
13490 |
14714 |
- |
RS27 |
Unspecified |
| scaffold5713 |
14731 |
14766 |
+ |
A-rich |
Low_complexity |
| scaffold5713 |
15271 |
15650 |
+ |
RS9170 |
Unspecified |
| scaffold5713 |
16049 |
16104 |
+ |
(TGTTTG)n |
Simple_repeat |
| scaffold5713 |
16675 |
17743 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5713 |
17448 |
19721 |
+ |
RS108 |
Unspecified |
| scaffold5713 |
17932 |
18001 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold5713 |
18192 |
18966 |
+ |
RS3631 |
Unspecified |
| scaffold5713 |
18933 |
19664 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold5713 |
19690 |
19736 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5713 |
19737 |
19798 |
+ |
(TGTGTTT)n |
Simple_repeat |
| scaffold5713 |
19919 |
19965 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5713 |
19966 |
20027 |
+ |
(TGTGTTT)n |
Simple_repeat |
| scaffold5713 |
20223 |
21054 |
+ |
RS3631 |
Unspecified |
| scaffold5713 |
21105 |
21230 |
+ |
RS3631 |
Unspecified |
| scaffold5713 |
21409 |
21491 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold5713 |
22357 |
23549 |
+ |
PL956 |
Unspecified |
| scaffold5713 |
24207 |
24227 |
+ |
(G)n |
Simple_repeat |
| scaffold5713 |
25177 |
25908 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5713 |
25216 |
25901 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5713 |
25903 |
26670 |
- |
RS288 |
Unspecified |
| scaffold5713 |
27166 |
27225 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5713 |
27773 |
27872 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold5713 |
27945 |
27997 |
+ |
(CTCACAA)n |
Simple_repeat |
| scaffold5713 |
29549 |
30052 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5713 |
31301 |
31832 |
- |
PL880 |
Unspecified |
| scaffold5713 |
31656 |
32594 |
+ |
RS616 |
Unspecified |
| scaffold5713 |
33092 |
33610 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5713 |
33612 |
33967 |
- |
RS288 |
Unspecified |
| scaffold5713 |
34409 |
35158 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5713 |
35756 |
36032 |
- |
PL880 |
Unspecified |
| scaffold5713 |
37187 |
37256 |
+ |
A-rich |
Low_complexity |
| scaffold5713 |
37423 |
38391 |
+ |
RS572 |
Unspecified |
| scaffold5713 |
39817 |
39877 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5713 |
40733 |
41677 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5713 |
40733 |
41907 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5713 |
41585 |
41907 |
- |
PL816 |
Unspecified |
| scaffold5713 |
41908 |
42345 |
+ |
PL405 |
Unspecified |
| scaffold5713 |
42883 |
42962 |
+ |
(TTAGTA)n |
Simple_repeat |
| scaffold5713 |
43504 |
43526 |
+ |
(AC)n |
Simple_repeat |
| scaffold5713 |
43647 |
43718 |
+ |
(TACACA)n |
Simple_repeat |
| scaffold5713 |
44467 |
44518 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5713 |
45067 |
45174 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5713 |
45186 |
46506 |
- |
RIRE1_I-int |
LTR/Copia |