scaffold5716 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5716 |
163 |
180 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
181 |
217 |
+ |
(AGCAAA)n |
Simple_repeat |
| scaffold5716 |
274 |
1191 |
+ |
RS1025 |
Unspecified |
| scaffold5716 |
4851 |
5324 |
+ |
RS655 |
Unspecified |
| scaffold5716 |
5609 |
5667 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold5716 |
5870 |
5903 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
6261 |
7353 |
- |
PL678 |
Unspecified |
| scaffold5716 |
11585 |
12362 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold5716 |
12650 |
14455 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5716 |
14659 |
14705 |
+ |
(TTGTTTG)n |
Simple_repeat |
| scaffold5716 |
15590 |
15776 |
- |
Gypsy-118_GM-I |
LTR/Gypsy |
| scaffold5716 |
16353 |
16394 |
+ |
(CTT)n |
Simple_repeat |
| scaffold5716 |
16834 |
17992 |
+ |
PL956 |
Unspecified |
| scaffold5716 |
17056 |
18553 |
- |
RS51 |
Unspecified |
| scaffold5716 |
18552 |
19452 |
- |
PL877 |
Unspecified |
| scaffold5716 |
18690 |
19453 |
- |
PL746 |
Unspecified |
| scaffold5716 |
19588 |
19637 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
19888 |
19915 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5716 |
20658 |
20725 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
20814 |
20848 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5716 |
21891 |
22644 |
- |
PL789 |
Unspecified |
| scaffold5716 |
24526 |
24573 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold5716 |
24839 |
24920 |
+ |
(TAC)n |
Simple_repeat |
| scaffold5716 |
24928 |
24960 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
25857 |
25898 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold5716 |
25919 |
26365 |
- |
PL486 |
Unspecified |
| scaffold5716 |
26465 |
26522 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
27023 |
27241 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold5716 |
27247 |
27355 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5716 |
28460 |
29388 |
- |
PL445 |
Unspecified |
| scaffold5716 |
29419 |
29460 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold5716 |
29459 |
29494 |
+ |
(TAATAC)n |
Simple_repeat |
| scaffold5716 |
31259 |
31329 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
31942 |
32020 |
+ |
(AATACG)n |
Simple_repeat |
| scaffold5716 |
32021 |
32061 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold5716 |
33541 |
33621 |
- |
RS189 |
Unspecified |
| scaffold5716 |
35212 |
36163 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold5716 |
37760 |
37890 |
+ |
PL789 |
Unspecified |
| scaffold5716 |
37914 |
37933 |
+ |
(T)n |
Simple_repeat |
| scaffold5716 |
38620 |
38652 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
39876 |
39913 |
+ |
(ACAATCT)n |
Simple_repeat |
| scaffold5716 |
39982 |
39997 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
39998 |
40052 |
+ |
(A)n |
Simple_repeat |
| scaffold5716 |
40053 |
40150 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
40797 |
40982 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold5716 |
45190 |
45258 |
+ |
DNA-TA-2_STu |
DNA/TcMar-Stowaway |
| scaffold5716 |
49579 |
49733 |
+ |
RS2905 |
Unspecified |
| scaffold5716 |
49894 |
49931 |
+ |
(T)n |
Simple_repeat |
| scaffold5716 |
50133 |
50885 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold5716 |
50133 |
50166 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold5716 |
50155 |
50885 |
+ |
PL126 |
Unspecified |
| scaffold5716 |
51938 |
53090 |
- |
RS553 |
Unspecified |
| scaffold5716 |
54066 |
54536 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5716 |
54569 |
54871 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5716 |
54647 |
54780 |
+ |
ATMU12 |
DNA/MULE-MuDR |
| scaffold5716 |
55005 |
55060 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold5716 |
56240 |
56381 |
- |
RS3032 |
Unspecified |
| scaffold5716 |
56353 |
56496 |
+ |
RS218 |
Unspecified |
| scaffold5716 |
56522 |
56561 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
57283 |
57506 |
- |
RS12980 |
Unspecified |
| scaffold5716 |
58648 |
58727 |
+ |
A-rich |
Low_complexity |
| scaffold5716 |
58899 |
58947 |
+ |
PL8 |
Unspecified |
| scaffold5716 |
59424 |
59728 |
- |
RS2697 |
Unspecified |
| scaffold5716 |
59827 |
60170 |
+ |
(T)n |
Simple_repeat |
| scaffold5716 |
59827 |
59855 |
+ |
(T)n |
Simple_repeat |
| scaffold5716 |
59845 |
60170 |
- |
RS2473 |
Unspecified |
| scaffold5716 |
59984 |
60488 |
- |
RS1653 |
Unspecified |
| scaffold5716 |
60548 |
60581 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5716 |
61212 |
61322 |
+ |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold5716 |
64201 |
64723 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold5716 |
64718 |
65474 |
- |
RS604 |
Unspecified |
| scaffold5716 |
64973 |
65540 |
+ |
PL781 |
Unspecified |
| scaffold5716 |
66873 |
66913 |
+ |
(CAG)n |
Simple_repeat |
| scaffold5716 |
67382 |
67395 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5716 |
67396 |
67487 |
- |
ATCopia24I |
LTR/Copia |
| scaffold5716 |
67488 |
67526 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5716 |
67632 |
67723 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5716 |
67839 |
69058 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold5716 |
71075 |
71315 |
- |
RS2985 |
Unspecified |
| scaffold5716 |
71141 |
71438 |
+ |
RS90 |
Unspecified |
| scaffold5716 |
72215 |
74397 |
- |
RS3120 |
Unspecified |
| scaffold5716 |
75929 |
77539 |
+ |
RS430 |
Unspecified |
| scaffold5716 |
77078 |
78265 |
- |
RS387 |
Unspecified |
| scaffold5716 |
79381 |
79449 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5716 |
80453 |
80505 |
+ |
(ATAACAA)n |
Simple_repeat |
| scaffold5716 |
81405 |
81527 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5716 |
81405 |
82101 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5716 |
81466 |
82101 |
+ |
PL39 |
Unspecified |