scaffold5748 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5748 |
475 |
670 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold5748 |
1652 |
2150 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5748 |
3149 |
3180 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5748 |
3423 |
3558 |
+ |
Athila6B_I-int |
LTR/Gypsy |
| scaffold5748 |
4018 |
4071 |
+ |
(AAAAG)n |
Simple_repeat |
| scaffold5748 |
4313 |
4371 |
+ |
Athila6B_I-int |
LTR/Gypsy |
| scaffold5748 |
4708 |
4745 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold5748 |
5646 |
6514 |
- |
RS242 |
Unspecified |
| scaffold5748 |
6954 |
7305 |
+ |
RS401 |
Unspecified |
| scaffold5748 |
7580 |
7606 |
+ |
(A)n |
Simple_repeat |
| scaffold5748 |
7673 |
7703 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5748 |
8422 |
8488 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold5748 |
9049 |
9248 |
- |
RS242 |
Unspecified |
| scaffold5748 |
9440 |
9474 |
+ |
(GCG)n |
Simple_repeat |
| scaffold5748 |
12293 |
12551 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5748 |
14019 |
14467 |
+ |
PL577 |
Unspecified |
| scaffold5748 |
17544 |
17601 |
+ |
(GGACACG)n |
Simple_repeat |
| scaffold5748 |
17674 |
17729 |
- |
RS1070 |
Unspecified |
| scaffold5748 |
17847 |
17894 |
+ |
A-rich |
Low_complexity |
| scaffold5748 |
18186 |
18279 |
- |
hAT-9N_SBi |
DNA/hAT-Tag1 |
| scaffold5748 |
18946 |
18975 |
+ |
(TCCGAT)n |
Simple_repeat |
| scaffold5748 |
20133 |
20160 |
+ |
(T)n |
Simple_repeat |
| scaffold5748 |
20387 |
20425 |
+ |
GA-rich |
Low_complexity |
| scaffold5748 |
21068 |
21117 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold5748 |
23592 |
23611 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5748 |
24488 |
25858 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold5748 |
24540 |
24635 |
+ |
LINE1-10_SBi |
LINE/L1 |
| scaffold5748 |
24857 |
25617 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold5748 |
25647 |
25785 |
+ |
LINE1-13_ZM |
LINE/L1 |
| scaffold5748 |
27599 |
27858 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5748 |
28409 |
28493 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold5748 |
29076 |
29303 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold5748 |
29286 |
29446 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold5748 |
30374 |
30425 |
+ |
A-rich |
Low_complexity |
| scaffold5748 |
36163 |
36979 |
- |
RS195 |
Unspecified |
| scaffold5748 |
37244 |
37655 |
+ |
RS2713 |
Unspecified |
| scaffold5748 |
40714 |
41621 |
+ |
PL120 |
Unspecified |
| scaffold5748 |
42119 |
42312 |
- |
PL306 |
Unspecified |
| scaffold5748 |
42598 |
43582 |
+ |
RS57 |
Unspecified |
| scaffold5748 |
44517 |
44550 |
+ |
(TAGT)n |
Simple_repeat |
| scaffold5748 |
45039 |
45096 |
+ |
GA-rich |
Low_complexity |
| scaffold5748 |
45490 |
45517 |
+ |
(T)n |
Simple_repeat |
| scaffold5748 |
45528 |
45554 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5748 |
45660 |
45692 |
+ |
(T)n |
Simple_repeat |
| scaffold5748 |
47090 |
47125 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5748 |
47435 |
47504 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5748 |
47745 |
47806 |
+ |
(T)n |
Simple_repeat |
| scaffold5748 |
48005 |
48043 |
+ |
(AAAATGA)n |
Simple_repeat |
| scaffold5748 |
48673 |
48723 |
+ |
(TTCATTT)n |
Simple_repeat |
| scaffold5748 |
49128 |
49193 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold5748 |
49904 |
50773 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold5748 |
49931 |
50436 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5748 |
51861 |
52216 |
- |
PL880 |
Unspecified |
| scaffold5748 |
53291 |
53326 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5748 |
55477 |
56401 |
- |
PL771 |
Unspecified |
| scaffold5748 |
59344 |
59416 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5748 |
60295 |
60377 |
+ |
GA-rich |
Low_complexity |
| scaffold5748 |
60885 |
61108 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold5748 |
61500 |
61590 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold5748 |
62807 |
63807 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold5748 |
64850 |
64877 |
+ |
(ATGTA)n |
Simple_repeat |
| scaffold5748 |
65477 |
65514 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold5748 |
65622 |
65643 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold5748 |
65644 |
65689 |
+ |
(TA)n |
Simple_repeat |
| scaffold5748 |
65867 |
66778 |
- |
RS1011 |
Unspecified |
| scaffold5748 |
67240 |
67289 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold5748 |
68574 |
68606 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5748 |
69153 |
69260 |
+ |
RS1867 |
Unspecified |