scaffold5765 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5765 |
1 |
725 |
+ |
RS813 |
Unspecified |
| scaffold5765 |
2197 |
3452 |
+ |
RS254 |
Unspecified |
| scaffold5765 |
3886 |
3930 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
4031 |
4081 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
4543 |
5247 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5765 |
5157 |
5247 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5765 |
5813 |
5906 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5765 |
5945 |
6016 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold5765 |
6305 |
6623 |
+ |
PL68 |
Unspecified |
| scaffold5765 |
7023 |
7596 |
+ |
Gypsy9-VV_I-int |
LTR/Gypsy |
| scaffold5765 |
7715 |
8393 |
- |
RS695 |
Unspecified |
| scaffold5765 |
7883 |
8410 |
- |
RS2098 |
Unspecified |
| scaffold5765 |
9611 |
9709 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
10254 |
10296 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5765 |
11176 |
11206 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold5765 |
11603 |
11630 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
11974 |
12054 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
12268 |
12311 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5765 |
12585 |
12873 |
+ |
RS10938 |
Unspecified |
| scaffold5765 |
13083 |
13115 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
15349 |
15396 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
16744 |
16788 |
- |
RS10521 |
Unspecified |
| scaffold5765 |
18273 |
18401 |
+ |
PL294 |
Unspecified |
| scaffold5765 |
20176 |
20357 |
- |
RS4 |
Unspecified |
| scaffold5765 |
20355 |
20422 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
20862 |
20942 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
21570 |
21673 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
22165 |
22397 |
- |
RS17079 |
Unspecified |
| scaffold5765 |
22426 |
22521 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
22976 |
23037 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
23187 |
23438 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold5765 |
23516 |
23544 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold5765 |
23557 |
24349 |
+ |
RS1838 |
Unspecified |
| scaffold5765 |
25112 |
25171 |
- |
Gypsy-52_BD-I |
LTR/Gypsy |
| scaffold5765 |
25800 |
25857 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5765 |
26899 |
27559 |
+ |
RS4105 |
Unspecified |
| scaffold5765 |
28010 |
28166 |
+ |
RS890 |
Unspecified |
| scaffold5765 |
28387 |
28439 |
- |
LINE1-68_SBi |
LINE/L1 |
| scaffold5765 |
28406 |
28487 |
- |
TA11 |
LINE/L1 |
| scaffold5765 |
28851 |
29694 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold5765 |
29724 |
29753 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
30011 |
30077 |
- |
SHALINE8_MT |
LINE/L1 |
| scaffold5765 |
31531 |
31565 |
+ |
(TTATGT)n |
Simple_repeat |
| scaffold5765 |
32615 |
32643 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
33088 |
33144 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
33269 |
33357 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold5765 |
33385 |
33454 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5765 |
33479 |
33587 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5765 |
34485 |
34573 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold5765 |
36929 |
37096 |
- |
PL854 |
Unspecified |
| scaffold5765 |
37791 |
37814 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
38029 |
38056 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
38333 |
38522 |
+ |
RS1075 |
Unspecified |
| scaffold5765 |
38386 |
38689 |
+ |
RS2532 |
Unspecified |
| scaffold5765 |
38991 |
39105 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5765 |
39150 |
39247 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5765 |
39648 |
39693 |
+ |
(A)n |
Simple_repeat |
| scaffold5765 |
40117 |
40155 |
+ |
(T)n |
Simple_repeat |
| scaffold5765 |
40591 |
42033 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold5765 |
40908 |
41523 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold5765 |
42954 |
43036 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
43137 |
43275 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5765 |
43689 |
43709 |
+ |
(A)n |
Simple_repeat |
| scaffold5765 |
43864 |
43969 |
+ |
RS1245 |
Unspecified |
| scaffold5765 |
44098 |
44124 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold5765 |
44144 |
44165 |
+ |
(A)n |
Simple_repeat |
| scaffold5765 |
45927 |
46015 |
+ |
(CACAAG)n |
Simple_repeat |
| scaffold5765 |
47377 |
48771 |
+ |
RS1496 |
Unspecified |
| scaffold5765 |
48768 |
48812 |
+ |
RS51 |
Unspecified |
| scaffold5765 |
48839 |
48880 |
+ |
(TA)n |
Simple_repeat |
| scaffold5765 |
52293 |
52538 |
- |
RS2399 |
Unspecified |
| scaffold5765 |
52405 |
52696 |
+ |
RS10384 |
Unspecified |
| scaffold5765 |
52697 |
52797 |
+ |
RS3726 |
Unspecified |
| scaffold5765 |
52708 |
53071 |
- |
RS1383 |
Unspecified |
| scaffold5765 |
53069 |
53369 |
- |
RS3538 |
Unspecified |
| scaffold5765 |
53308 |
53982 |
- |
RS914 |
Unspecified |
| scaffold5765 |
54080 |
54203 |
- |
MuDR-10_ZM |
DNA/MULE-MuDR |
| scaffold5765 |
54348 |
54631 |
+ |
RS3219 |
Unspecified |
| scaffold5765 |
55423 |
55462 |
+ |
(TA)n |
Simple_repeat |
| scaffold5765 |
57783 |
57879 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5765 |
58696 |
59646 |
+ |
PL771 |
Unspecified |
| scaffold5765 |
59659 |
60050 |
+ |
RS851 |
Unspecified |
| scaffold5765 |
59882 |
60109 |
- |
RS176 |
Unspecified |
| scaffold5765 |
60147 |
60331 |
- |
RS6173 |
Unspecified |
| scaffold5765 |
60249 |
60430 |
- |
RS8142 |
Unspecified |
| scaffold5765 |
61775 |
61831 |
+ |
(TATGAT)n |
Simple_repeat |
| scaffold5765 |
63721 |
63759 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold5765 |
65583 |
66072 |
+ |
Copia-65_Mad-I |
LTR/Copia |
| scaffold5765 |
66413 |
66804 |
+ |
RS851 |
Unspecified |
| scaffold5765 |
67126 |
67223 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold5765 |
67228 |
67266 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5765 |
67267 |
67365 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5765 |
67366 |
67390 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5765 |
67391 |
67542 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
67543 |
67599 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5765 |
69851 |
69872 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold5765 |
70743 |
70811 |
+ |
A-rich |
Low_complexity |
| scaffold5765 |
72586 |
72863 |
+ |
RS1833 |
Unspecified |
| scaffold5765 |
72615 |
72914 |
+ |
RS4674 |
Unspecified |
| scaffold5765 |
73394 |
73430 |
+ |
(CAACATA)n |
Simple_repeat |
| scaffold5765 |
73458 |
73528 |
+ |
(CTCAA)n |
Simple_repeat |
| scaffold5765 |
74473 |
74550 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5765 |
75101 |
75201 |
- |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold5765 |
76359 |
76385 |
+ |
(AGGAA)n |
Simple_repeat |
| scaffold5765 |
77116 |
77173 |
+ |
PL124 |
Unspecified |