scaffold5768 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5768 |
1 |
622 |
+ |
RS51 |
Unspecified |
| scaffold5768 |
4706 |
5669 |
+ |
RS813 |
Unspecified |
| scaffold5768 |
5535 |
6383 |
+ |
RS878 |
Unspecified |
| scaffold5768 |
6351 |
6742 |
+ |
RS878 |
Unspecified |
| scaffold5768 |
6971 |
7036 |
+ |
(TCAGCA)n |
Simple_repeat |
| scaffold5768 |
7054 |
7392 |
+ |
RS564 |
Unspecified |
| scaffold5768 |
7392 |
8539 |
+ |
RS51 |
Unspecified |
| scaffold5768 |
9325 |
9478 |
- |
PL124 |
Unspecified |
| scaffold5768 |
9479 |
10139 |
- |
RS7435 |
Unspecified |
| scaffold5768 |
10717 |
11634 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5768 |
10925 |
10977 |
- |
MuDR-4_Mad |
DNA/MULE-MuDR |
| scaffold5768 |
11715 |
11736 |
+ |
(A)n |
Simple_repeat |
| scaffold5768 |
12087 |
12125 |
+ |
(ATCATC)n |
Simple_repeat |
| scaffold5768 |
12172 |
12202 |
+ |
(AACT)n |
Simple_repeat |
| scaffold5768 |
12561 |
14713 |
+ |
(TT)n |
Simple_repeat |
| scaffold5768 |
14617 |
14713 |
+ |
(TT)n |
Simple_repeat |
| scaffold5768 |
15669 |
15707 |
+ |
(CAC)n |
Simple_repeat |
| scaffold5768 |
17360 |
17386 |
+ |
(ACTAA)n |
Simple_repeat |
| scaffold5768 |
18091 |
18132 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5768 |
18132 |
19033 |
+ |
PL193 |
Unspecified |
| scaffold5768 |
19036 |
19304 |
- |
PL206 |
Unspecified |
| scaffold5768 |
19304 |
19367 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5768 |
19432 |
19451 |
+ |
(A)n |
Simple_repeat |
| scaffold5768 |
19479 |
19613 |
+ |
(CACCAC)n |
Simple_repeat |
| scaffold5768 |
20330 |
21184 |
+ |
RS601 |
Unspecified |
| scaffold5768 |
21671 |
22202 |
- |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold5768 |
22236 |
22288 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5768 |
22785 |
22816 |
+ |
(ACAATCA)n |
Simple_repeat |
| scaffold5768 |
23600 |
23687 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
24084 |
24125 |
+ |
(ACACTCG)n |
Simple_repeat |
| scaffold5768 |
24236 |
24288 |
- |
Gypsy-196_ZM-I |
LTR/Gypsy |
| scaffold5768 |
25731 |
26610 |
+ |
PL706 |
Unspecified |
| scaffold5768 |
26187 |
26229 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5768 |
26571 |
28988 |
+ |
RS27 |
Unspecified |
| scaffold5768 |
28145 |
29106 |
+ |
RS238 |
Unspecified |
| scaffold5768 |
28274 |
29611 |
+ |
RS249 |
Unspecified |
| scaffold5768 |
29398 |
30028 |
+ |
RS88 |
Unspecified |
| scaffold5768 |
30536 |
30580 |
+ |
(T)n |
Simple_repeat |
| scaffold5768 |
31074 |
32010 |
+ |
RS141 |
Unspecified |
| scaffold5768 |
31810 |
32133 |
+ |
PL898 |
Unspecified |
| scaffold5768 |
31903 |
32214 |
+ |
PL898 |
Unspecified |
| scaffold5768 |
32700 |
32984 |
+ |
RS23 |
Unspecified |
| scaffold5768 |
32782 |
33133 |
+ |
RS23 |
Unspecified |
| scaffold5768 |
33772 |
34086 |
+ |
RS23 |
Unspecified |
| scaffold5768 |
33955 |
35124 |
+ |
RS23 |
Unspecified |
| scaffold5768 |
35120 |
35606 |
+ |
RS2383 |
Unspecified |
| scaffold5768 |
35683 |
35719 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
36517 |
37220 |
+ |
RS27 |
Unspecified |
| scaffold5768 |
38025 |
38579 |
+ |
RS535 |
Unspecified |
| scaffold5768 |
38520 |
39283 |
+ |
RS530 |
Unspecified |
| scaffold5768 |
38643 |
39385 |
+ |
RS695 |
Unspecified |
| scaffold5768 |
38682 |
39323 |
+ |
PL219 |
Unspecified |
| scaffold5768 |
40019 |
40251 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5768 |
40443 |
40978 |
+ |
RS3329 |
Unspecified |
| scaffold5768 |
41133 |
41652 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5768 |
42130 |
42161 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold5768 |
42503 |
42573 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5768 |
43123 |
43192 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
43405 |
43447 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5768 |
43958 |
44556 |
- |
RS732 |
Unspecified |
| scaffold5768 |
44030 |
44724 |
+ |
RS530 |
Unspecified |
| scaffold5768 |
44123 |
44750 |
+ |
PL219 |
Unspecified |
| scaffold5768 |
46652 |
46706 |
+ |
(TTATG)n |
Simple_repeat |
| scaffold5768 |
47131 |
47201 |
+ |
(TTGAGA)n |
Simple_repeat |
| scaffold5768 |
48017 |
48074 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5768 |
48092 |
48690 |
- |
RS488 |
Unspecified |
| scaffold5768 |
48401 |
48850 |
- |
RS1545 |
Unspecified |
| scaffold5768 |
48473 |
48852 |
+ |
RS1707 |
Unspecified |
| scaffold5768 |
50118 |
50768 |
- |
RS984 |
Unspecified |
| scaffold5768 |
51730 |
51772 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5768 |
52393 |
52541 |
- |
PL271 |
Unspecified |
| scaffold5768 |
52536 |
52765 |
+ |
PL501 |
Unspecified |
| scaffold5768 |
52760 |
52823 |
- |
PL139 |
Unspecified |
| scaffold5768 |
54032 |
54078 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5768 |
54312 |
54358 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
54514 |
54742 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5768 |
55742 |
55781 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
55903 |
55980 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
55991 |
56043 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5768 |
56470 |
57311 |
+ |
RS514 |
Unspecified |
| scaffold5768 |
56596 |
57274 |
+ |
RS3091 |
Unspecified |
| scaffold5768 |
56916 |
57501 |
- |
PL532 |
Unspecified |
| scaffold5768 |
57521 |
57578 |
- |
RS4448 |
Unspecified |
| scaffold5768 |
57576 |
57767 |
- |
RS425 |
Unspecified |
| scaffold5768 |
59001 |
59047 |
+ |
(ATTTTGA)n |
Simple_repeat |
| scaffold5768 |
60675 |
60724 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold5768 |
61192 |
61822 |
- |
RS4448 |
Unspecified |
| scaffold5768 |
62570 |
62611 |
+ |
(ACCAA)n |
Simple_repeat |
| scaffold5768 |
63120 |
63254 |
+ |
RS337 |
Unspecified |
| scaffold5768 |
63255 |
63571 |
- |
PL13 |
Unspecified |
| scaffold5768 |
64303 |
64891 |
+ |
RS132 |
Unspecified |
| scaffold5768 |
64889 |
64926 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold5768 |
65447 |
65487 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
66120 |
66219 |
+ |
LT1_EPa |
LTR? |
| scaffold5768 |
69590 |
69671 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold5768 |
70793 |
70825 |
+ |
(A)n |
Simple_repeat |
| scaffold5768 |
73534 |
73575 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
76751 |
76767 |
+ |
(GT)n |
Simple_repeat |
| scaffold5768 |
77065 |
77111 |
+ |
(TC)n |
Simple_repeat |
| scaffold5768 |
77111 |
77144 |
+ |
(T)n |
Simple_repeat |
| scaffold5768 |
77236 |
77359 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
78173 |
78209 |
+ |
(T)n |
Simple_repeat |
| scaffold5768 |
78264 |
78443 |
- |
RS246 |
Unspecified |
| scaffold5768 |
79789 |
79828 |
+ |
(T)n |
Simple_repeat |
| scaffold5768 |
80290 |
80442 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold5768 |
81735 |
84076 |
+ |
(ACTATTC)n |
Simple_repeat |
| scaffold5768 |
84033 |
84076 |
+ |
(ACTATTC)n |
Simple_repeat |
| scaffold5768 |
84077 |
84739 |
+ |
PL951 |
Unspecified |
| scaffold5768 |
84759 |
84817 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5768 |
85097 |
85200 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold5768 |
85348 |
85388 |
+ |
A-rich |
Low_complexity |
| scaffold5768 |
85562 |
85623 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5768 |
86416 |
86442 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold5768 |
87510 |
87653 |
- |
PL920 |
Unspecified |
| scaffold5768 |
87651 |
88194 |
- |
PL799 |
Unspecified |
| scaffold5768 |
88341 |
88374 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5768 |
88375 |
88406 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5768 |
88407 |
88521 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5768 |
88916 |
88970 |
+ |
(CTTCT)n |
Simple_repeat |
| scaffold5768 |
89058 |
89101 |
+ |
(TTTCAAT)n |
Simple_repeat |