scaffold5777 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5777 |
1 |
202 |
- |
RS110 |
Unspecified |
| scaffold5777 |
206 |
808 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5777 |
214 |
457 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold5777 |
432 |
547 |
+ |
Copia-105_GM-I |
LTR/Copia |
| scaffold5777 |
706 |
776 |
+ |
TORTL1 |
LTR/Copia |
| scaffold5777 |
1229 |
2062 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5777 |
2129 |
3187 |
+ |
Copia-105_GM-I |
LTR/Copia |
| scaffold5777 |
4198 |
4902 |
+ |
Copia10-VV_I-int |
LTR/Copia |
| scaffold5777 |
4198 |
4972 |
+ |
Copia10-VV_I-int |
LTR/Copia |
| scaffold5777 |
4844 |
4972 |
+ |
RS1807 |
Unspecified |
| scaffold5777 |
4977 |
5145 |
+ |
TORTL1 |
LTR/Copia |
| scaffold5777 |
9338 |
9395 |
- |
BvL1-2 |
LINE/L1 |
| scaffold5777 |
9502 |
9967 |
+ |
RS686 |
Unspecified |
| scaffold5777 |
10093 |
10164 |
- |
RS13496 |
Unspecified |
| scaffold5777 |
10110 |
10814 |
- |
RS169 |
Unspecified |
| scaffold5777 |
12072 |
12125 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold5777 |
12169 |
12575 |
+ |
PL951 |
Unspecified |
| scaffold5777 |
12280 |
12629 |
+ |
PL969 |
Unspecified |
| scaffold5777 |
13138 |
13220 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
13278 |
13341 |
+ |
(AATTTTC)n |
Simple_repeat |
| scaffold5777 |
13491 |
13554 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
13629 |
13670 |
+ |
(TAATTTA)n |
Simple_repeat |
| scaffold5777 |
13774 |
14152 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
13774 |
13797 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
13788 |
14152 |
- |
PL143 |
Unspecified |
| scaffold5777 |
14119 |
14862 |
- |
PL166 |
Unspecified |
| scaffold5777 |
14868 |
14957 |
+ |
PL902 |
Unspecified |
| scaffold5777 |
16430 |
16454 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
16654 |
16711 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold5777 |
16746 |
16794 |
+ |
(AAGATAA)n |
Simple_repeat |
| scaffold5777 |
17074 |
17116 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
17122 |
17695 |
+ |
PL469 |
Unspecified |
| scaffold5777 |
17752 |
17832 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5777 |
17752 |
17928 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5777 |
17812 |
17928 |
+ |
RS14266 |
Unspecified |
| scaffold5777 |
17848 |
18050 |
+ |
PL469 |
Unspecified |
| scaffold5777 |
18288 |
18371 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5777 |
18923 |
18952 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5777 |
19029 |
19095 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
19125 |
19430 |
- |
PL169 |
Unspecified |
| scaffold5777 |
19442 |
19486 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
20104 |
20254 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5777 |
20104 |
20142 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5777 |
20137 |
20254 |
+ |
PL476 |
Unspecified |
| scaffold5777 |
20268 |
20806 |
+ |
PL476 |
Unspecified |
| scaffold5777 |
20979 |
21461 |
- |
PL292 |
Unspecified |
| scaffold5777 |
22121 |
22157 |
+ |
(GAT)n |
Simple_repeat |
| scaffold5777 |
22282 |
22316 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5777 |
26186 |
26211 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold5777 |
26212 |
26230 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5777 |
26264 |
26317 |
- |
TS |
SINE/tRNA-RTE |
| scaffold5777 |
27868 |
28123 |
- |
RS1 |
Unspecified |
| scaffold5777 |
30149 |
30182 |
+ |
(TTAGTTC)n |
Simple_repeat |
| scaffold5777 |
30194 |
30329 |
+ |
RS5207 |
Unspecified |
| scaffold5777 |
31988 |
32024 |
- |
RS138 |
Unspecified |
| scaffold5777 |
32236 |
32501 |
+ |
RS106 |
Unspecified |
| scaffold5777 |
34694 |
34746 |
+ |
(ACA)n |
Simple_repeat |
| scaffold5777 |
35769 |
35847 |
- |
PL289 |
Unspecified |
| scaffold5777 |
35945 |
36210 |
+ |
RS1943 |
Unspecified |
| scaffold5777 |
36676 |
36763 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold5777 |
36922 |
36975 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5777 |
37063 |
37121 |
+ |
(ATTATAT)n |
Simple_repeat |
| scaffold5777 |
37725 |
37747 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
38406 |
38436 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
39447 |
39476 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5777 |
39580 |
39647 |
+ |
(GGACC)n |
Simple_repeat |
| scaffold5777 |
39751 |
39904 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold5777 |
39925 |
39987 |
+ |
RS221 |
Unspecified |
| scaffold5777 |
47695 |
47721 |
+ |
(GAA)n |
Simple_repeat |
| scaffold5777 |
48243 |
48322 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
48344 |
48516 |
+ |
RS503 |
Unspecified |
| scaffold5777 |
48505 |
48690 |
- |
RS152 |
Unspecified |
| scaffold5777 |
48913 |
48944 |
+ |
(TA)n |
Simple_repeat |
| scaffold5777 |
49971 |
49994 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
50457 |
50693 |
- |
RS202 |
Unspecified |
| scaffold5777 |
51369 |
51431 |
+ |
RS6139 |
Unspecified |
| scaffold5777 |
51955 |
52206 |
- |
L1-5_STu |
LINE/L1 |
| scaffold5777 |
52331 |
53533 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold5777 |
52353 |
53234 |
- |
L1-5_STu |
LINE/L1 |
| scaffold5777 |
55642 |
55683 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
55870 |
55943 |
+ |
RS2339 |
Unspecified |
| scaffold5777 |
57126 |
57152 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
57270 |
57295 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold5777 |
57923 |
58064 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold5777 |
58166 |
58188 |
+ |
(TGCA)n |
Simple_repeat |
| scaffold5777 |
58204 |
58225 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
58541 |
58566 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
59824 |
59842 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
61395 |
61768 |
- |
RS4260 |
Unspecified |
| scaffold5777 |
62666 |
62684 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
63388 |
63615 |
- |
Copia-3_SL-I |
LTR/Copia |
| scaffold5777 |
63867 |
64035 |
- |
Copia-88_VV-I |
LTR/Copia |
| scaffold5777 |
66424 |
66587 |
+ |
RS1733 |
Unspecified |
| scaffold5777 |
66508 |
66755 |
+ |
RS3371 |
Unspecified |
| scaffold5777 |
66853 |
66928 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
67052 |
67151 |
+ |
RS5646 |
Unspecified |
| scaffold5777 |
67244 |
67518 |
+ |
RS7889 |
Unspecified |
| scaffold5777 |
67660 |
67767 |
+ |
RS2042 |
Unspecified |
| scaffold5777 |
67673 |
68073 |
+ |
RS3309 |
Unspecified |
| scaffold5777 |
67888 |
68296 |
+ |
RS2042 |
Unspecified |
| scaffold5777 |
68098 |
68326 |
+ |
RS6019 |
Unspecified |
| scaffold5777 |
68355 |
68627 |
+ |
RS4039 |
Unspecified |
| scaffold5777 |
68672 |
68795 |
- |
RS10602 |
Unspecified |
| scaffold5777 |
68783 |
68873 |
+ |
RS13461 |
Unspecified |
| scaffold5777 |
68918 |
68935 |
+ |
(A)n |
Simple_repeat |
| scaffold5777 |
69021 |
69779 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
69021 |
69157 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
69111 |
69779 |
+ |
RS884 |
Unspecified |
| scaffold5777 |
69242 |
69879 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold5777 |
69843 |
69879 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold5777 |
69878 |
69951 |
- |
RS203 |
Unspecified |
| scaffold5777 |
69930 |
70393 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
70358 |
70393 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
70560 |
71295 |
+ |
RS7309 |
Unspecified |
| scaffold5777 |
71439 |
71762 |
- |
RS4142 |
Unspecified |
| scaffold5777 |
71656 |
72021 |
- |
RS8822 |
Unspecified |
| scaffold5777 |
73082 |
73201 |
+ |
RS6501 |
Unspecified |
| scaffold5777 |
73228 |
73260 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
74833 |
74861 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
74938 |
75086 |
+ |
RS13906 |
Unspecified |
| scaffold5777 |
75204 |
75335 |
+ |
RS12082 |
Unspecified |
| scaffold5777 |
75442 |
75695 |
+ |
RS11850 |
Unspecified |
| scaffold5777 |
75633 |
75711 |
+ |
RS17066 |
Unspecified |
| scaffold5777 |
76400 |
76699 |
- |
RS13915 |
Unspecified |
| scaffold5777 |
78121 |
78269 |
+ |
RS9659 |
Unspecified |
| scaffold5777 |
78810 |
79014 |
+ |
RS86 |
Unspecified |
| scaffold5777 |
80093 |
80134 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5777 |
80786 |
81179 |
- |
RS8822 |
Unspecified |
| scaffold5777 |
80897 |
81760 |
- |
RS1083 |
Unspecified |
| scaffold5777 |
81013 |
82267 |
- |
RS1875 |
Unspecified |
| scaffold5777 |
82314 |
82353 |
- |
RS3590 |
Unspecified |
| scaffold5777 |
82376 |
82659 |
- |
RS3590 |
Unspecified |
| scaffold5777 |
82810 |
82846 |
+ |
A-rich |
Low_complexity |
| scaffold5777 |
82964 |
82989 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5777 |
83290 |
83330 |
- |
RS8773 |
Unspecified |
| scaffold5777 |
83332 |
84265 |
+ |
RS337 |
Unspecified |
| scaffold5777 |
85186 |
85226 |
+ |
(ATATATG)n |
Simple_repeat |
| scaffold5777 |
85228 |
85288 |
- |
RS13824 |
Unspecified |
| scaffold5777 |
85894 |
85916 |
+ |
(T)n |
Simple_repeat |
| scaffold5777 |
86843 |
86877 |
+ |
(ATTTCA)n |
Simple_repeat |