scaffold5785 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5785 |
36 |
64 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5785 |
196 |
265 |
- |
SZ-63_int-int |
LTR/Gypsy |
| scaffold5785 |
1414 |
1526 |
+ |
RS17972 |
Unspecified |
| scaffold5785 |
1480 |
1587 |
+ |
RS2490 |
Unspecified |
| scaffold5785 |
1628 |
1742 |
- |
RS11081 |
Unspecified |
| scaffold5785 |
1681 |
1919 |
- |
RS5142 |
Unspecified |
| scaffold5785 |
1922 |
1986 |
+ |
(TATTAC)n |
Simple_repeat |
| scaffold5785 |
2398 |
2578 |
+ |
RS8325 |
Unspecified |
| scaffold5785 |
2632 |
2657 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
4390 |
4695 |
+ |
RS2860 |
Unspecified |
| scaffold5785 |
4819 |
4848 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
5524 |
5607 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold5785 |
5801 |
5838 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
5895 |
5921 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
5974 |
6005 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
6034 |
6200 |
+ |
PL753 |
Unspecified |
| scaffold5785 |
6966 |
7304 |
+ |
PL637 |
Unspecified |
| scaffold5785 |
8637 |
8653 |
+ |
(TCA)n |
Simple_repeat |
| scaffold5785 |
11349 |
11456 |
+ |
RS10807 |
Unspecified |
| scaffold5785 |
11589 |
11704 |
+ |
RS10249 |
Unspecified |
| scaffold5785 |
14348 |
14574 |
- |
RS1137 |
Unspecified |
| scaffold5785 |
18006 |
18082 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5785 |
24866 |
24952 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold5785 |
25078 |
25126 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
26713 |
26789 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
28349 |
28395 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
29078 |
29117 |
+ |
(ATACTAA)n |
Simple_repeat |
| scaffold5785 |
29314 |
29425 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
30744 |
30764 |
+ |
(GAAT)n |
Simple_repeat |
| scaffold5785 |
30816 |
30992 |
+ |
STOWAWAY12_SB |
DNA/TcMar-Stowaway |
| scaffold5785 |
30816 |
30882 |
+ |
STOWAWAY12_SB |
DNA/TcMar-Stowaway |
| scaffold5785 |
30860 |
30992 |
- |
RS47 |
Unspecified |
| scaffold5785 |
30988 |
31040 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5785 |
31173 |
31211 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
31250 |
31494 |
+ |
RS4 |
Unspecified |
| scaffold5785 |
32180 |
32217 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
32545 |
32780 |
- |
RS2126 |
Unspecified |
| scaffold5785 |
32872 |
33104 |
+ |
RS1714 |
Unspecified |
| scaffold5785 |
32872 |
33073 |
+ |
RS1714 |
Unspecified |
| scaffold5785 |
33366 |
33473 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold5785 |
33648 |
33679 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
33765 |
33938 |
- |
RS492 |
Unspecified |
| scaffold5785 |
34026 |
34275 |
- |
RS921 |
Unspecified |
| scaffold5785 |
34194 |
34655 |
- |
RS831 |
Unspecified |
| scaffold5785 |
34438 |
35133 |
- |
RS214 |
Unspecified |
| scaffold5785 |
35191 |
35627 |
- |
RS370 |
Unspecified |
| scaffold5785 |
36033 |
36130 |
- |
PL539 |
Unspecified |
| scaffold5785 |
41601 |
41637 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
41963 |
41984 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
42589 |
42695 |
- |
RS2097 |
Unspecified |
| scaffold5785 |
42726 |
43028 |
- |
RS5235 |
Unspecified |
| scaffold5785 |
43036 |
43844 |
+ |
RS5442 |
Unspecified |
| scaffold5785 |
44431 |
44515 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
44431 |
44597 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
44483 |
44597 |
- |
RS464 |
Unspecified |
| scaffold5785 |
44927 |
44971 |
+ |
(TGTAAC)n |
Simple_repeat |
| scaffold5785 |
45082 |
45123 |
+ |
(CTAT)n |
Simple_repeat |
| scaffold5785 |
45510 |
45656 |
- |
RS10668 |
Unspecified |
| scaffold5785 |
46294 |
46431 |
- |
RS8689 |
Unspecified |
| scaffold5785 |
46832 |
46993 |
- |
RS6069 |
Unspecified |
| scaffold5785 |
47121 |
47174 |
+ |
(GTT)n |
Simple_repeat |
| scaffold5785 |
47205 |
47403 |
- |
RS6378 |
Unspecified |
| scaffold5785 |
48653 |
48824 |
+ |
RS12175 |
Unspecified |
| scaffold5785 |
49773 |
50133 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5785 |
50223 |
50324 |
+ |
PL376 |
Unspecified |
| scaffold5785 |
52345 |
52415 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold5785 |
53153 |
53238 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold5785 |
55274 |
55294 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
55584 |
55784 |
- |
RS4 |
Unspecified |
| scaffold5785 |
56443 |
56712 |
- |
RS16888 |
Unspecified |
| scaffold5785 |
58605 |
58671 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5785 |
59149 |
59244 |
+ |
PL167 |
Unspecified |
| scaffold5785 |
59383 |
59483 |
+ |
Copia-78_ST-I |
LTR/Copia |
| scaffold5785 |
59557 |
59706 |
+ |
Copia-78_ST-I |
LTR/Copia |
| scaffold5785 |
59920 |
60770 |
+ |
Copia-78_ST-I |
LTR/Copia |
| scaffold5785 |
61121 |
62766 |
+ |
Copia-75_GM-I |
LTR/Copia |
| scaffold5785 |
64474 |
64513 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
66719 |
67648 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5785 |
67640 |
67737 |
- |
RS51 |
Unspecified |
| scaffold5785 |
67725 |
67857 |
- |
RS16382 |
Unspecified |
| scaffold5785 |
68133 |
68166 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
68680 |
68797 |
- |
RS2017 |
Unspecified |
| scaffold5785 |
69424 |
69645 |
+ |
RS183 |
Unspecified |
| scaffold5785 |
69655 |
69760 |
+ |
RS17525 |
Unspecified |
| scaffold5785 |
70017 |
70231 |
- |
RS2214 |
Unspecified |
| scaffold5785 |
70507 |
70545 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold5785 |
74733 |
74896 |
- |
PL664 |
Unspecified |
| scaffold5785 |
75094 |
75127 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5785 |
76343 |
76621 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold5785 |
76637 |
76798 |
+ |
PL560 |
Unspecified |
| scaffold5785 |
76912 |
77022 |
+ |
RS29 |
Unspecified |
| scaffold5785 |
77052 |
77089 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
77913 |
77985 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
78451 |
78588 |
+ |
RS4305 |
Unspecified |
| scaffold5785 |
78687 |
78816 |
+ |
RS9815 |
Unspecified |
| scaffold5785 |
78868 |
78911 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
79406 |
79667 |
- |
RS748 |
Unspecified |
| scaffold5785 |
79682 |
80027 |
- |
RS3734 |
Unspecified |
| scaffold5785 |
79897 |
80055 |
- |
RS176 |
Unspecified |
| scaffold5785 |
80545 |
80561 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
80943 |
81056 |
+ |
RS13324 |
Unspecified |
| scaffold5785 |
81047 |
81653 |
- |
RS424 |
Unspecified |
| scaffold5785 |
82895 |
82929 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
84190 |
84448 |
- |
RS310 |
Unspecified |
| scaffold5785 |
84760 |
84807 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
85845 |
85868 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
85924 |
85956 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold5785 |
86785 |
86966 |
+ |
RS492 |
Unspecified |
| scaffold5785 |
87833 |
87917 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5785 |
88239 |
88272 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold5785 |
90624 |
90744 |
- |
RS14573 |
Unspecified |
| scaffold5785 |
91130 |
91158 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
91435 |
91509 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
91510 |
91722 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
97616 |
97736 |
- |
RS14573 |
Unspecified |
| scaffold5785 |
98122 |
98150 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
98427 |
98501 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
98502 |
98655 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
98671 |
98753 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5785 |
101616 |
101641 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
102982 |
104518 |
- |
L1-16_Mad |
LINE/L1 |
| scaffold5785 |
104635 |
104763 |
- |
LINE1-26_SBi |
LINE/L1 |
| scaffold5785 |
105109 |
105347 |
- |
L1-14_Mad |
LINE/L1 |
| scaffold5785 |
105625 |
105773 |
- |
L1-14_Mad |
LINE/L1 |
| scaffold5785 |
107618 |
107847 |
+ |
Copia-75_GM-I |
LTR/Copia |
| scaffold5785 |
108380 |
108416 |
+ |
(A)n |
Simple_repeat |
| scaffold5785 |
108552 |
108902 |
- |
RS8 |
Unspecified |
| scaffold5785 |
109108 |
109162 |
+ |
(TCATTTA)n |
Simple_repeat |
| scaffold5785 |
109595 |
109638 |
+ |
(GAATTA)n |
Simple_repeat |
| scaffold5785 |
109943 |
110422 |
+ |
PL6 |
Unspecified |
| scaffold5785 |
110421 |
110528 |
+ |
PL803 |
Unspecified |
| scaffold5785 |
110863 |
110893 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
111062 |
111087 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
111124 |
111185 |
- |
RS86 |
Unspecified |
| scaffold5785 |
111366 |
111398 |
+ |
(TC)n |
Simple_repeat |
| scaffold5785 |
111579 |
111623 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold5785 |
113709 |
113733 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
115222 |
115273 |
+ |
(TT)n |
Simple_repeat |
| scaffold5785 |
120527 |
120559 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
121801 |
121969 |
+ |
RS128 |
Unspecified |
| scaffold5785 |
122543 |
122597 |
+ |
(AGTGA)n |
Simple_repeat |
| scaffold5785 |
123797 |
124036 |
- |
RS586 |
Unspecified |
| scaffold5785 |
124286 |
124330 |
+ |
(ATAGAA)n |
Simple_repeat |
| scaffold5785 |
124343 |
124578 |
- |
RS2493 |
Unspecified |
| scaffold5785 |
124684 |
124888 |
+ |
RS10 |
Unspecified |
| scaffold5785 |
125012 |
125097 |
- |
LT1_EPa |
LTR? |
| scaffold5785 |
125687 |
125756 |
+ |
A-rich |
Low_complexity |
| scaffold5785 |
125796 |
125848 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold5785 |
126487 |
126640 |
+ |
RS10 |
Unspecified |
| scaffold5785 |
126785 |
127009 |
- |
RS17860 |
Unspecified |
| scaffold5785 |
127191 |
127215 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5785 |
127260 |
127387 |
- |
RS9351 |
Unspecified |
| scaffold5785 |
127400 |
127581 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5785 |
127671 |
127689 |
+ |
(GCC)n |
Simple_repeat |
| scaffold5785 |
127723 |
128133 |
- |
RS2038 |
Unspecified |
| scaffold5785 |
128402 |
128527 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5785 |
128528 |
128562 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold5785 |
128567 |
128656 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold5785 |
128734 |
129286 |
+ |
PL214 |
Unspecified |
| scaffold5785 |
129295 |
129436 |
- |
RS35 |
Unspecified |
| scaffold5785 |
129497 |
129740 |
- |
RS777 |
Unspecified |
| scaffold5785 |
129829 |
130087 |
+ |
RS16888 |
Unspecified |
| scaffold5785 |
130212 |
130249 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
130773 |
130847 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5785 |
131067 |
131345 |
+ |
RS42 |
Unspecified |
| scaffold5785 |
131558 |
131586 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold5785 |
131663 |
131679 |
+ |
(T)n |
Simple_repeat |
| scaffold5785 |
131946 |
132019 |
+ |
RS42 |
Unspecified |