scaffold5787 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5787 |
77 |
182 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5787 |
183 |
226 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5787 |
227 |
272 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5787 |
305 |
369 |
+ |
(CTGAACTGAG)n |
Simple_repeat |
| scaffold5787 |
1036 |
1096 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold5787 |
1419 |
1602 |
+ |
RS2011 |
Unspecified |
| scaffold5787 |
1717 |
1908 |
- |
RS4999 |
Unspecified |
| scaffold5787 |
2719 |
2762 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold5787 |
5398 |
5415 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
5515 |
5538 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold5787 |
6068 |
6555 |
+ |
PL587 |
Unspecified |
| scaffold5787 |
6767 |
6788 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
7604 |
7923 |
+ |
RS17525 |
Unspecified |
| scaffold5787 |
7618 |
7849 |
+ |
RS1362 |
Unspecified |
| scaffold5787 |
7938 |
8271 |
- |
RS1436 |
Unspecified |
| scaffold5787 |
8110 |
8268 |
+ |
RS1570 |
Unspecified |
| scaffold5787 |
8334 |
9106 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5787 |
9234 |
11445 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5787 |
11451 |
11640 |
- |
RS1865 |
Unspecified |
| scaffold5787 |
11663 |
12818 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5787 |
12823 |
13010 |
+ |
PL208 |
Unspecified |
| scaffold5787 |
13016 |
14441 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5787 |
14977 |
15220 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5787 |
15220 |
15321 |
+ |
RS17917 |
Unspecified |
| scaffold5787 |
15220 |
15302 |
+ |
RS1570 |
Unspecified |
| scaffold5787 |
15469 |
15536 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold5787 |
16144 |
16192 |
+ |
GA-rich |
Low_complexity |
| scaffold5787 |
16341 |
16393 |
+ |
GA-rich |
Low_complexity |
| scaffold5787 |
17396 |
17425 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5787 |
17682 |
18110 |
- |
PL2 |
Unspecified |
| scaffold5787 |
18820 |
18878 |
+ |
A-rich |
Low_complexity |
| scaffold5787 |
19116 |
19168 |
+ |
A-rich |
Low_complexity |
| scaffold5787 |
19508 |
19581 |
+ |
(TTT)n |
Simple_repeat |
| scaffold5787 |
19607 |
19641 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5787 |
19884 |
19920 |
- |
RS15997 |
Unspecified |
| scaffold5787 |
20297 |
20340 |
+ |
(TGC)n |
Simple_repeat |
| scaffold5787 |
20354 |
20378 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold5787 |
22392 |
22411 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
22569 |
22733 |
+ |
RS275 |
Unspecified |
| scaffold5787 |
24179 |
24206 |
+ |
(AT)n |
Simple_repeat |
| scaffold5787 |
26046 |
26224 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5787 |
26459 |
26639 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5787 |
27988 |
28178 |
+ |
RS509 |
Unspecified |
| scaffold5787 |
28010 |
28178 |
+ |
RS2719 |
Unspecified |
| scaffold5787 |
30128 |
30151 |
+ |
(TATT)n |
Simple_repeat |
| scaffold5787 |
31136 |
31165 |
+ |
A-rich |
Low_complexity |
| scaffold5787 |
31437 |
31566 |
- |
RS10 |
Unspecified |
| scaffold5787 |
31883 |
31999 |
+ |
RS109 |
Unspecified |
| scaffold5787 |
32197 |
32325 |
- |
RS7323 |
Unspecified |
| scaffold5787 |
32773 |
32798 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5787 |
32817 |
32849 |
+ |
A-rich |
Low_complexity |
| scaffold5787 |
32901 |
33152 |
- |
RS240 |
Unspecified |
| scaffold5787 |
33499 |
33575 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5787 |
33581 |
33598 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
34474 |
34499 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5787 |
35935 |
36107 |
+ |
RS133 |
Unspecified |
| scaffold5787 |
36172 |
37254 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold5787 |
37412 |
37452 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold5787 |
37644 |
37668 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
37880 |
38295 |
- |
RS539 |
Unspecified |
| scaffold5787 |
38016 |
38564 |
- |
RS1791 |
Unspecified |
| scaffold5787 |
38569 |
38620 |
+ |
(TTTCAGC)n |
Simple_repeat |
| scaffold5787 |
38706 |
38755 |
+ |
(T)n |
Simple_repeat |
| scaffold5787 |
39664 |
39718 |
+ |
(ATTTATA)n |
Simple_repeat |
| scaffold5787 |
39708 |
39737 |
+ |
(T)n |
Simple_repeat |
| scaffold5787 |
41122 |
41293 |
+ |
RS133 |
Unspecified |
| scaffold5787 |
41303 |
41463 |
+ |
RS133 |
Unspecified |
| scaffold5787 |
41528 |
42613 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold5787 |
42768 |
42810 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold5787 |
43003 |
43026 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
43050 |
43376 |
+ |
RS1230 |
Unspecified |
| scaffold5787 |
43387 |
43581 |
- |
RS6891 |
Unspecified |
| scaffold5787 |
43412 |
43702 |
+ |
PL359 |
Unspecified |
| scaffold5787 |
47474 |
47573 |
- |
RS4475 |
Unspecified |
| scaffold5787 |
47770 |
47811 |
+ |
(ACGTACT)n |
Simple_repeat |
| scaffold5787 |
54577 |
54634 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold5787 |
54647 |
54680 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5787 |
55099 |
55131 |
+ |
(A)n |
Simple_repeat |
| scaffold5787 |
56617 |
56653 |
+ |
(ACACTT)n |
Simple_repeat |
| scaffold5787 |
59268 |
59294 |
+ |
(GTG)n |
Simple_repeat |
| scaffold5787 |
60065 |
60108 |
+ |
(TGT)n |
Simple_repeat |
| scaffold5787 |
61185 |
61228 |
- |
RS17 |
Unspecified |
| scaffold5787 |
61229 |
61375 |
- |
RS727 |
Unspecified |
| scaffold5787 |
61372 |
61414 |
+ |
RS727 |
Unspecified |
| scaffold5787 |
61622 |
61666 |
+ |
(CCT)n |
Simple_repeat |
| scaffold5787 |
62521 |
62545 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5787 |
62644 |
62708 |
+ |
Sat-1_CPa |
Satellite |
| scaffold5787 |
62726 |
62762 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5787 |
63693 |
63737 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold5787 |
64429 |
64495 |
- |
STOWAWAY14_SB |
DNA/TcMar-Stowaway |
| scaffold5787 |
64583 |
64724 |
+ |
RS1115 |
Unspecified |
| scaffold5787 |
65541 |
65619 |
+ |
(AAGTTTTCTG)n |
Simple_repeat |
| scaffold5787 |
65641 |
65687 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5787 |
65688 |
65762 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold5787 |
65944 |
66041 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5787 |
66047 |
66093 |
- |
RS1323 |
Unspecified |
| scaffold5787 |
66075 |
66163 |
- |
RS1323 |
Unspecified |
| scaffold5787 |
66443 |
66479 |
+ |
(GTATTTT)n |
Simple_repeat |
| scaffold5787 |
66596 |
66955 |
- |
PL700 |
Unspecified |
| scaffold5787 |
67008 |
67088 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5787 |
67384 |
67423 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5787 |
68392 |
68862 |
+ |
RS35 |
Unspecified |
| scaffold5787 |
68891 |
68944 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold5787 |
69143 |
69186 |
+ |
(TAATATTC)n |
Simple_repeat |
| scaffold5787 |
70484 |
71050 |
- |
RS2618 |
Unspecified |
| scaffold5787 |
72443 |
72537 |
+ |
RS4475 |
Unspecified |
| scaffold5787 |
72819 |
72886 |
- |
RS115 |
Unspecified |
| scaffold5787 |
72827 |
72971 |
+ |
RS115 |
Unspecified |
| scaffold5787 |
73790 |
73944 |
+ |
RS1542 |
Unspecified |
| scaffold5787 |
74373 |
74410 |
+ |
(AAAATA)n |
Simple_repeat |
| scaffold5787 |
75183 |
75575 |
+ |
RS600 |
Unspecified |
| scaffold5787 |
75811 |
75923 |
- |
RS134 |
Unspecified |
| scaffold5787 |
75926 |
76000 |
+ |
RS2052 |
Unspecified |
| scaffold5787 |
76013 |
76073 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold5787 |
76177 |
76276 |
+ |
RS9348 |
Unspecified |
| scaffold5787 |
77047 |
77119 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold5787 |
77206 |
77472 |
+ |
RS10 |
Unspecified |
| scaffold5787 |
77764 |
78136 |
+ |
RS8 |
Unspecified |
| scaffold5787 |
78574 |
78633 |
+ |
(ATTCATT)n |
Simple_repeat |
| scaffold5787 |
78898 |
79034 |
- |
RS43 |
Unspecified |
| scaffold5787 |
79308 |
79840 |
+ |
RS4422 |
Unspecified |
| scaffold5787 |
80377 |
80438 |
+ |
RS54 |
Unspecified |
| scaffold5787 |
84995 |
85041 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5787 |
85219 |
85620 |
+ |
PL223 |
Unspecified |
| scaffold5787 |
85722 |
86050 |
- |
RS1920 |
Unspecified |
| scaffold5787 |
86047 |
86217 |
- |
RS13061 |
Unspecified |
| scaffold5787 |
86252 |
86272 |
+ |
(A)n |
Simple_repeat |